cluster # 5342

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Oryza sativa
cluster # 5342 cluster # 5342 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5342#0 length = 389 sequences # 3

consensusID : consensus_5342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 389
fasta sequence

                              [ACGCCGCCACCTCTCGCCATGCCGGCGCCGGCGAGCTCCCGGTACGTGCCGCTCGCGGCGGCGCCGGAGCAGCGGCACGACGGCGAGGCGGAGGAGTGCTGCTACGCGGCGACGACGACGAGGTACGTGCCGCTGCGGCGGCGGCGGGGGGAGCAGGATCAGGCCGAGTACGCGGCGAGGCGGGCGCTGTTCCTGCAGAGCTACCGGTTCACGACGGCGGCGGTGTCCGCCGGC-GAGCGGGACGACGGCGGCGTCGGCGGCGGCGGGCTGCGCGGGCGCGTGGCGCGGCGGGTGCGGGAGGCGGTGGCAAGGGCGGTGTCGCGCGCGCGCGGCGCGGCGCGGTGGTGGGTCGGCGGCGGCGTCGGGGTGGCAAGGGCGTGGCCTCGCGT]

[+] EMBL AU184868             [ACGCCGCCACCTCTCGCCATGCCGGCGCCGGCGAGCTCCCGGTACGTGCCGCTCGCGGCGGCGCCGGAGCAGCGGCACGACGGCGAGGCGGAGGAGTGCTGCTACGCGGCGACGACGACGAGGTACGTGCCGCTGCGGCGGCGGCGGGGGGAGCAGGATCAGGCCGAGTACGCGGCGAGGCGGGCGCTGTTCCTGCAGAGCTACCGGTTCACGACGGCGGCGGTGTCCGCCGGC GAGCGGGACGACGGCGGCGTCGGCGGCGGCGGGCTGCGCGGGCGCGTGGCGCGGCGGGTGCGGGAGGCGGTGGCAAGGGCGGTGTCGCGCGCGCGCGGCGCGGCGCGGTGGTGGGTCGGCGGCGGCGTCGGGGTGGCAAGGGCGTGGCCTCGCGT]
[+] EMBL AU184872             [ACGCCGCCACCTCTCGCCATGCCGGCGCCGGCGAGCTCCCGGTACGTGCCGCTCGCGGCGGCGCCGGAGCAGCGGCACGACGGCGAGGCGGAGGAGTGCTGCTACGCGGCGACGACGACGAGGTACGTGCCGCTGCGGCGGCGGCGGGGGGAGCAGGATCAGGCCGAGTACGCGGCGAGGCGGGCGCTGTTCCTGCAGAGCTACCGGTTCACGACGGCGGCGGTGTCCGCCGGC GAGCGGGACGACGGCGGNGTCGGCGGCGGCGGGCTGCGCGGGCGCGTGGCGCGGCGGGTGCGGGAGGCGGTGGCGAGGGCGGTGTCNCGCGCGCTCGGCGCGNCGCGGTGGTGGtt                                       ]
[+] EMBL AU173855             [ CGCCGCCACCTCTCGCCATGCCGGCGCCGGCGAGCTCCCGGTACGTGCCGCTCGCGGCGGCGCCGGAGCAGCGGCACGACGGCGAGGCGGAGGAGTGCTGCTACGCGGCGACGACGACGAGGTACGTGCCGCTGCGGCGGCGGCGGGGGGAGCAGGATCAGGCCGAGTACGCGGCGAGGCGGGCGCTGTTCCTGCAGAGCTACCGGTTCACGACGGCGGCGGTGTCCGCCGGCTNAGCGGGACGACGGCGGCGTCGGCGGagtg                                                                                                                             ]




>consensus_5342#0
ACGCCGCCACCTCTCGCCATGCCGGCGCCGGCGAGCTCCCGGTACGTGCCGCTCGCGGCG
GCGCCGGAGCAGCGGCACGACGGCGAGGCGGAGGAGTGCTGCTACGCGGCGACGACGACG
AGGTACGTGCCGCTGCGGCGGCGGCGGGGGGAGCAGGATCAGGCCGAGTACGCGGCGAGG
CGGGCGCTGTTCCTGCAGAGCTACCGGTTCACGACGGCGGCGGTGTCCGCCGGCGAGCGG
GACGACGGCGGCGTCGGCGGCGGCGGGCTGCGCGGGCGCGTGGCGCGGCGGGTGCGGGAG
GCGGTGGCAAGGGCGGTGTCGCGCGCGCGCGGCGCGGCGCGGTGGTGGGTCGGCGGCGGC
GTCGGGGTGGCAAGGGCGTGGCCTCGCGT

clustalw multiple alignements is not computed in this case