cluster # 5344

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Oryza sativa
cluster # 5344 cluster # 5344 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5344#0 length = 2925 sequences # 3
consensusID : consensus_5344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2925
fasta sequence
                              [TGGGACCAAAAAAAGCTGATATGTGAGCTCTGAAGCGAATGTTGAGCCCCTCGGCTGTGAAGGTACACTATGGCAGAGGTGAGTATATCGAGCTTTGCAATCACCGTTCTTGAAAAAGCTGCGTCTTTTGGCACTGACTGGGCTGTTAGTGAGATAAAGTCCGCTTGGAACGTCAAGAAAGAACTAGAGAAGTTGGAAACA-TCACTGAGATCCATATGTGCTGTTCTTAGAGATGCCGAATGCAAGCAGTCTACTTCCCACTCCCTTCAAGAGTGGTTGGACAATTTGAAGGATGCAGTCTATGACATAGACGATGTTCTGGACGATGTTTCTACCGAAGCCCTAGAGCAAGAAGTTCGGAATAGTTTCATCCATAGAACAAGGAACATGCTTACTTATCCATTCAAATTGAGTCAAAAAATAAAAGAAGTTCGCAAAAAACTTGATGAGATAGCAGCCAATAGAGCACAGTTTGGACTAACTGAGCATGTAATTGATGTCCATACATCTGGGAGCAGCAACAGGGAAACACATTCTTTCATAACTGAACCAGAAATTATTGGAAGAGATGAAGCTAAACGTAAGATTGTTGAGACGATTTGTACAGCTACAGAATCAAATCCTTTGTCTGTGCTTCCTATTGTTGGTTTAGGAGGCATAGGAAAAACTGCACTGGCACAGCTGATTTACAACGATGTACAAATTACCGAGACATTTCAGAAGAAGTTATGGGTATGTGTCTCTAATGTATTTGATCTTAAGAAGATCCTGGATGACATAATGCAGTCAGGCACAGGTAAAAGCAACAAACATTTAAACCTAGAGATGCTACAGAGTAAGGTGCGTGGGTTTTTATGTGAAAAGAGATATCTGCTAGTATTGGATGACATGTGGAATGACAAAGTTAATGAATGGGACGAGCTAAAATGCCTACTATCCAGTGGAGGAAGTGGAAGTGTGATTATAGTCACCACACGCAATATGAGTGTTGCATCGATAGTGAAGACCCTAGAACCATATGATGTGGCAAAACTAACTGATGATAAGTGCATGCAAGTATTCATGCATTATGCATTTAGAGGTGGCGGGCCACATGACCCTAAGTTATTGGAAATTGGAAAATCCATTGTTGAGAAATGTTGTGGTATTCCCTTGGCAGCAAAGACATTGGGTTCCCTATTGTGCACTAGTCATGATGTTGGAGAATGGCGGCGCGTCATGGAGGATAAAATTTGGAATACTGAGGCAAAAGTATATGGTCTAATCCCTGCATTAAAACTGAGTTATGATGCACTTCCTCCCCATCTGCGAGCATGCTTTTCTTGTTTATCCATTTTCCCAAAAGACCATCAGTTGTTTTATTCTACTACAGTCATGTTATGGATGGCATTGGGGATGTTGAATACAGGCAAGGAAAGCAAACAAATGATATCTGCTGGAAGTAAGTGCTTTCATGATCTCCTAGGAAGATCGTTGTTCCAAGACCAAATTATTGTTTATGATGAAACCATTCAAAGCTGTAAAATGCATGATCTTATTCATGATCTAGCACAATTCGTTTCAGAAAATGAGCATGCTGTTATCAGTTGTGAAAAGACTGCTTTCTCTAAAAGGGTTAAGCATCTAGTGTGAGATTGCAAGGACTTCTCAGGAGAGCACGAATTTCCTAAGCAGTTGAAAAAGGCATGTAAGGTGAGAACATTTTCAAGCATATACAATTATGGTACCGTGAGCAAACCTTTTCTTGAGGTCCTCTTCTCAACGTTCACGCTTCTGCGTGTATTGATTTTTTCCGAAACTCACTTTGAAGAGCTGCCAAGTTCCATCAGAAATTTGAAGCACCTACGGTACTTAGATCTACAATGGAACCGAAAAATCAAACGCCTACCAAATTCTTTATGTAGGTTGGTGAATCTGCAAACGGTTCATCTTGCTCAGTGCGACCAACTAGAGGGCCTACCAAGAGACGTGCATCAACTTGTCAGCCTTACATATTTGAGCCTCACGTCAAAGCAGAAGTATCTACTAAAAAGTGGATTTTGTGGTTGGCCTAGCCTGACGTTTCTATATTTGCATCACTGCGTTGAGTTAACATCACTGACAGAGGGATTCGGCAGCCTCGCTGCCCTGCGGGAGCTGCGCATCTTCAACTGTCCGAAGTTGGCTTCTCTCCCCTCTGCAATGAAGCAGCTCTCCTCACTTGAGAAATTGGTGCTTAATAACTGCAATGAGTTGGATTTGATGGAACCAGGGGAAGCCTTGAGCGGCCTGGGCAGTCTTCGTGCGCTCAACCTTGTGGGGCTTCCGAAGCTGGTGGGTTTCTCAGCGAGCTTCCAATCTGCTGCGTCCTCTCTTCAATATTTTTGTATCGGCGATTGCCAAGGGCTGGAGAAGCTGCCAGATTTCATCCAAAGTTTCACTTGTCTTAAGATAATTGGGATTCGTGACTTCCCCGAGTTGAGCAGGAGATGCACGGCTGAATCCGGCGAGGATTTTCATCTCATCCACCACGTTCTGCGGATTTACATCGACAAT-AAAATCTGGGAAAAGAATCGTACGTGATGCCCCCCTGACGCCAGGCCTGTAGAGAACCGGCTGG-TTTCAAGACTTTCCGCTCAAAGAAAATTGCATTCGAATATTTGGTTGGAGTGGCCTTCCAGGCTGGGCGTCCATACTCTGATACTCCTCGTGTATTGAAGGCTTGAAGCGCATCATGTCTGTGTCATTTGTGCTGCACCCTATTGTGTACGCATACATGTTCGTTCCATGCATGCATACTTTGTGTGTAATAATTGGGTACATTTGCTAATTGCTACATATTTGTGCAACTTTCATGTGTAACAAACGGCACAAACGTACTATGTACGGATGTTTGAACTGGATACTCATGTTTGTAACTTTGTATTTCTAATATCACATCATTTA]

[+] EMBL AK099477             [TGGGACCAAAAAAAGCTGATATGTGAGCTCTGAAGCGAATGTTGAGCCCCTCGGCTGTGAAGGTACACTATGGCAGAGGTGAGTATATCGAGCTTTGCAATCACCGTTCTTGAAAAAGCTGCGTCTTTTGGCACTGACTGGGCTGTTAGTGAGATAAAGTCCGCTTGGAACGTCAAGAAAGAACTAGAGAAGTTGGAAACA TCACTGAGATCCATATGTGCTGTTCTTAGAGATGCCGAATGCAAGCAGTCTACTTCCCACTCCCTTCAAGAGTGGTTGGACAATTTGAAGGATGCAGTCTATGACATAGACGATGTTCTGGACGATGTTTCTACCGAAGCCCTAGAGCAAGAAGTTCGGAATAGTTTCATCCATAGAACAAGGAACATGCTTACTTATCCATTCAAATTGAGTCAAAAAATAAAAGAAGTTCGCAAAAAACTTGATGAGATAGCAGCCAATAGAGCACAGTTTGGACTAACTGAGCATGTAATTGATGTCCATACATCTGGGAGCAGCAACAGGGAAACACATTCTTTCATAACTGAACCAGAAATTATTGGAAGAGATGAAGCTAAACGTAAGATTGTTGAGACGATTTGTACAGCTACAGAATCAAATCCTTTGTCTGTGCTTCCTATTGTTGGTTTAGGAGGCATAGGAAAAACTGCACTGGCACAGCTGATTTACAACGATGTACAAATTACCGAGACATTTCAGAAGAAGTTATGGGTATGTGTCTCTAATGTATTTGATCTTAAGAAGATCCTGGATGACATAATGCAGTCAGGCACAGGTAAAAGCAACAAACATTTAAACCTAGAGATGCTACAGAGTAAGGTGCGTGGGTTTTTATGTGAAAAGAGATATCTGCTAGTATTGGATGACATGTGGAATGACAAAGTTAATGAATGGGACGAGCTAAAATGCCTACTATCCAGTGGAGGAAGTGGAAGTGTGATTATAGTCACCACACGCAATATGAGTGTTGCATCGATAGTGAAGACCCTAGAACCATATGATGTGGCAAAACTAACTGATGATAAGTGCATGCAAGTATTCATGCATTATGCATTTAGAGGTGGCGGGCCACATGACCCTAAGTTATTGGAAATTGGAAAATCCATTGTTGAGAAATGTTGTGGTATTCCCTTGGCAGCAAAGACATTGGGTTCCCTATTGTGCACTAGTCATGATGTTGGAGAATGGCGGCGCGTCATGGAGGATAAAATTTGGAATACTGAGGCAAAAGTATATGGTCTAATCCCTGCATTAAAACTGAGTTATGATGCACTTCCTCCCCATCTGCGAGCATGCTTTTCTTGTTTATCCATTTTCCCAAAAGACCATCAGTTGTTTTATTCTACTACAGTCATGTTATGGATGGCATTGGGGATGTTGAATACAGGCAAGGAAAGCAAACAAATGATATCTGCTGGAAGTAAGTGCTTTCATGATCTCCTAGGAAGATCGTTGTTCCAAGACCAAATTATTGTTTATGATGAAACCATTCAAAGCTGTAAAATGCATGATCTTATTCATGATCTAGCACAATTCGTTTCAGAAAATGAGCATGCTGTTATCAGTTGTGAAAAGACTGCTTTCTCTAAAAGGGTTAAGCATCTAGTGTGAGATTGCAAGGACTTCTCAGGAGAGCACGAATTTCCTAAGCAGTTGAAAAAGGCATGTAAGGTGAGAACATTTTCAAGCATATACAATTATGGTACCGTGAGCAAACCTTTTCTTGAGGTCCTCTTCTCAACGTTCACGCTTCTGCGTGTATTGATTTTTTCCGAAACTCACTTTGAAGAGCTGCCAAGTTCCATCAGAAATTTGAAGCACCTACGGTACTTAGATCTACAATGGAACCGAAAAATCAAACGCCTACCAAATTCTTTATGTAGGTTGGTGAATCTGCAAACGGTTCATCTTGCTCAGTGCGACCAACTAGAGGGCCTACCAAGAGACGTGCATCAACTTGTCAGCCTTACATATTTGAGCCTCACGTCAAAGCAGAAGTATCTACTAAAAAGTGGATTTTGTGGTTGGCCTAGCCTGACGTTTCTATATTTGCATCACTGCGTTGAGTTAACATCACTGACAGAGGGATTCGGCAGCCTCGCTGCCCTGCGGGAGCTGCGCATCTTCAACTGTCCGAAGTTGGCTTCTCTCCCCTCTGCAATGAAGCAGCTCTCCTCACTTGAGAAATTGGTGCTTAATAACTGCAATGAGTTGGATTTGATGGAACCAGGGGAAGCCTTGAGCGGCCTGGGCAGTCTTCGTGCGCTCAACCTTGTGGGGCTTCCGAAGCTGGTGGGTTTCTCAGCGAGCTTCCAATCTGCTGCGTCCTCTCTTCAATATTTTTGTATCGGCGATTGCCAAGGGCTGGAGAAGCTGCCAGATTTCATCCAAAGTTTCACTTGTCTTAAGATAATTGGGATTCGTGACTTCCCCGAGTTGAGCAGGAGATGCACGGCTGAATCCGGCGAGGATTTTCATCTCATCCACCACGTTCTGCGGATTTACATCGACAAT AAAATCTGGGAAAAGAATCGTACGTGATGCCCCCCTGACGCCAGGCCTGTAGAGAACCGGCTGG TTTCAAGACTTTCCGCTCAAAGAAAATTGCATTCGAATATTTGGTTGGAGTGGCCTTCCAGGCTGGGCGTCCATACTCTGATACTCCTCGTGTATTGAAGGCTTGAAGCGCATCATGTCTGTGTCATTTGTGCTGCACCCTATTGTGTACGCATACATGTTCGTTCCATGCATGCATACTTTGTGTGTAATAATTGGGTACATTTGCTAATTGCTACATATTTGTGCAACTTTCATGTGTAACAAACGGCACAAACGTACTATGTACGGATGTTTGAACTGGATACTCATGTTTGTAACTTTGTATTTCTAATATCACATCATTTA]
[+] EMBL CB627963             [                                                                                                                                                                                                   GAAACACTCACTGAGATCCATATGTGCTGTTCTTAGAGATGCCGAATGCAAGCAGTCTACTTCCCACTCCCTTCAAGAGTGGTTGGACAATTTGAAGGATGCAATCTATGACATAGACGATGTTCTAGACGATGTTTCTACCGAAGCCCTAGAGCAAGAAGTTCGGAATAGTTTCATCCATAGAACAAGGAACATGCTTACTTATCCATTCAAATTGAGTCAAAAAATAAAAGAAGTTCGCAAAAAACTTGATGAGATAGCAGCCAATAGAGCACGGTTTGGACTAACTGAGCATGTAATTGATGTCCATACATCTGGGAGCAGCAACAGGGAAACACATTCTTTCATAACTGAACCAGAAATTATTGGAAGAGATGAAGCTAAACGTAAGATTGTTGAGACGATTTGTACAGCTACAGAATCAAATCCTTTGTCTGTGCTTCCTATTGTTGGTTTAGGAGGCATAGGAAAAACTGCACTGGCACAGCTGATTTACAACGATGTACAAATTACCGAGACATTTCAGAAGAAGTTATGGGTATGTGTCTCTGATGTATTTGATCTTAAGAAGATCCTGGATGACATAATGCAGTCAGGCACAGGTAAAAGCAACAAACATTTAAACCTAGAGATGCTACAGAGTAAGGTGCGTGGGTTTTTATGTGAAAAGAGATATCTGCTAGTATTGGATGACATGTGGAATGACAAAGTTAATGAATGGGACGAGCTAAAATGCCTACTATCCAGTGGAGGAAGTGGAAGTGTGATTATAGTCACCACACGCAATATGAGTGTTGCATCGATAGTGAAGACCCTAGAACCATATGATGTGGCAAAACTAACTGATGATAAGTGCATGCAAGTATTCATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI812085             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATTGGGATTCGTGACTGCCCCGAGTTGAGCAGGAGATGCAC GCTGAATCCGGCGAGGATTTTCATCTCATCCACCACGTTCTGCGGATTTACATCGACAATAAAAATCTGGGAAAAGAATCGTACGTGATGCCCCGCTGACGCCAGGCCTGTAGAGAACCGGCTGGTTTTCAAGACTTTCCGCTCAAAGAAAATTGCATTCGAATATTTGGTTGGAGT GCCTTCCAGGCTGGGCGTCCATACTCTGATACTCCTCGTGTATTGAAGGCTTGAAGCGCATCATGTCTGTGTCATTTGTGCTGCACCCTATTGTGTACGCATACATGTTCGTTCCATGCATGCATACTTTGTGTGTAATAATTGGGTACATTTGCTAATTGCTACATATTTGTGCAACTTTCATGTGTAAC AACGGCAC AACGTACTATGTACGGATGTTTGAACTGGATACTCATGTTTGTAAaaaaaaaa                    ]




>consensus_5344#0
TGGGACCAAAAAAAGCTGATATGTGAGCTCTGAAGCGAATGTTGAGCCCCTCGGCTGTGA
AGGTACACTATGGCAGAGGTGAGTATATCGAGCTTTGCAATCACCGTTCTTGAAAAAGCT
GCGTCTTTTGGCACTGACTGGGCTGTTAGTGAGATAAAGTCCGCTTGGAACGTCAAGAAA
GAACTAGAGAAGTTGGAAACATCACTGAGATCCATATGTGCTGTTCTTAGAGATGCCGAA
TGCAAGCAGTCTACTTCCCACTCCCTTCAAGAGTGGTTGGACAATTTGAAGGATGCAGTC
TATGACATAGACGATGTTCTGGACGATGTTTCTACCGAAGCCCTAGAGCAAGAAGTTCGG
AATAGTTTCATCCATAGAACAAGGAACATGCTTACTTATCCATTCAAATTGAGTCAAAAA
ATAAAAGAAGTTCGCAAAAAACTTGATGAGATAGCAGCCAATAGAGCACAGTTTGGACTA
ACTGAGCATGTAATTGATGTCCATACATCTGGGAGCAGCAACAGGGAAACACATTCTTTC
ATAACTGAACCAGAAATTATTGGAAGAGATGAAGCTAAACGTAAGATTGTTGAGACGATT
TGTACAGCTACAGAATCAAATCCTTTGTCTGTGCTTCCTATTGTTGGTTTAGGAGGCATA
GGAAAAACTGCACTGGCACAGCTGATTTACAACGATGTACAAATTACCGAGACATTTCAG
AAGAAGTTATGGGTATGTGTCTCTAATGTATTTGATCTTAAGAAGATCCTGGATGACATA
ATGCAGTCAGGCACAGGTAAAAGCAACAAACATTTAAACCTAGAGATGCTACAGAGTAAG
GTGCGTGGGTTTTTATGTGAAAAGAGATATCTGCTAGTATTGGATGACATGTGGAATGAC
AAAGTTAATGAATGGGACGAGCTAAAATGCCTACTATCCAGTGGAGGAAGTGGAAGTGTG
ATTATAGTCACCACACGCAATATGAGTGTTGCATCGATAGTGAAGACCCTAGAACCATAT
GATGTGGCAAAACTAACTGATGATAAGTGCATGCAAGTATTCATGCATTATGCATTTAGA
GGTGGCGGGCCACATGACCCTAAGTTATTGGAAATTGGAAAATCCATTGTTGAGAAATGT
TGTGGTATTCCCTTGGCAGCAAAGACATTGGGTTCCCTATTGTGCACTAGTCATGATGTT
GGAGAATGGCGGCGCGTCATGGAGGATAAAATTTGGAATACTGAGGCAAAAGTATATGGT
CTAATCCCTGCATTAAAACTGAGTTATGATGCACTTCCTCCCCATCTGCGAGCATGCTTT
TCTTGTTTATCCATTTTCCCAAAAGACCATCAGTTGTTTTATTCTACTACAGTCATGTTA
TGGATGGCATTGGGGATGTTGAATACAGGCAAGGAAAGCAAACAAATGATATCTGCTGGA
AGTAAGTGCTTTCATGATCTCCTAGGAAGATCGTTGTTCCAAGACCAAATTATTGTTTAT
GATGAAACCATTCAAAGCTGTAAAATGCATGATCTTATTCATGATCTAGCACAATTCGTT
TCAGAAAATGAGCATGCTGTTATCAGTTGTGAAAAGACTGCTTTCTCTAAAAGGGTTAAG
CATCTAGTGTGAGATTGCAAGGACTTCTCAGGAGAGCACGAATTTCCTAAGCAGTTGAAA
AAGGCATGTAAGGTGAGAACATTTTCAAGCATATACAATTATGGTACCGTGAGCAAACCT
TTTCTTGAGGTCCTCTTCTCAACGTTCACGCTTCTGCGTGTATTGATTTTTTCCGAAACT
CACTTTGAAGAGCTGCCAAGTTCCATCAGAAATTTGAAGCACCTACGGTACTTAGATCTA
CAATGGAACCGAAAAATCAAACGCCTACCAAATTCTTTATGTAGGTTGGTGAATCTGCAA
ACGGTTCATCTTGCTCAGTGCGACCAACTAGAGGGCCTACCAAGAGACGTGCATCAACTT
GTCAGCCTTACATATTTGAGCCTCACGTCAAAGCAGAAGTATCTACTAAAAAGTGGATTT
TGTGGTTGGCCTAGCCTGACGTTTCTATATTTGCATCACTGCGTTGAGTTAACATCACTG
ACAGAGGGATTCGGCAGCCTCGCTGCCCTGCGGGAGCTGCGCATCTTCAACTGTCCGAAG
TTGGCTTCTCTCCCCTCTGCAATGAAGCAGCTCTCCTCACTTGAGAAATTGGTGCTTAAT
AACTGCAATGAGTTGGATTTGATGGAACCAGGGGAAGCCTTGAGCGGCCTGGGCAGTCTT
CGTGCGCTCAACCTTGTGGGGCTTCCGAAGCTGGTGGGTTTCTCAGCGAGCTTCCAATCT
GCTGCGTCCTCTCTTCAATATTTTTGTATCGGCGATTGCCAAGGGCTGGAGAAGCTGCCA
GATTTCATCCAAAGTTTCACTTGTCTTAAGATAATTGGGATTCGTGACTTCCCCGAGTTG
AGCAGGAGATGCACGGCTGAATCCGGCGAGGATTTTCATCTCATCCACCACGTTCTGCGG
ATTTACATCGACAATAAAATCTGGGAAAAGAATCGTACGTGATGCCCCCCTGACGCCAGG
CCTGTAGAGAACCGGCTGGTTTCAAGACTTTCCGCTCAAAGAAAATTGCATTCGAATATT
TGGTTGGAGTGGCCTTCCAGGCTGGGCGTCCATACTCTGATACTCCTCGTGTATTGAAGG
CTTGAAGCGCATCATGTCTGTGTCATTTGTGCTGCACCCTATTGTGTACGCATACATGTT
CGTTCCATGCATGCATACTTTGTGTGTAATAATTGGGTACATTTGCTAATTGCTACATAT
TTGTGCAACTTTCATGTGTAACAAACGGCACAAACGTACTATGTACGGATGTTTGAACTG
GATACTCATGTTTGTAACTTTGTATTTCTAATATCACATCATTTA
clustalw multiple alignements is not computed in this case