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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5346 cluster # 5346       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5346#0 length = 723 sequences # 3  

consensusID : consensus_5346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 723
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTNAGCCAAAGGCACTGTTCTACCTTTTTTTTTAATCTTTTGNCCCTCTTTACATGATCTAANAAATGANAAAGGGGNAATTTTTTCTTCTCTTTTTTTTTTTACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCANAGTCTTNTTTCCTCCTGCAATTGCCTGCANATTTTGCAGCANATGGATTGGGGCACTGGAGGAGTANAGGTTGCAGCTAGCTAANAGGAAGGAGGCCGCTGNGGCCGGCGGTAGCCGAGCTCCATGACNAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTGCTCCACCGGCGAGCTCTTCAGCCACAGCTCGAGCAGGCCTTGCAATGTGGTCGAGGGGGAGATTGCCTCGCCATGGCATGTGATCTCCACCTCATCTTCACTTGCTAGGTCAAGCTTATTCATGATGTACCTCTGGATCAAGGAAGTCTGCAGACTTCCATCTTTAATTCTCACGTAATATGTTGGTAGCTGAGGCAGCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTATTCCATCATGCAAAGCACCAGTTCTTGTAGAACCAATCTGTCCCTGCTGTGAATCAGCATGTTGTCCTTTCCTCAGCTCATAGTCTGAGGTGGTTTTATCTTTCGATGATGCAGATTGTGAAG]

[-] EMBL AU173894             [TTTTTTTTTTTTTTTTTTTNAGCCAAAGGCACTGTTCTACCTTTTTTTTTAATCTTTTGNCCCTCTTTACATGATCTAANAAATGANAAAGGGGNAATTTTTTCTTCTCTTTTTTTTTTTACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCANAGTCTTNTTTCCTCCTGCAATTGCCTGCANATTTTGCAGCANATGGATTGGGGCACTGGAGGAGTANAGGTTGCAGCTAGCTAANAGGAAGGAGGCCGCTGNGGCCGGCGGTAGCCGAGCTCCATGACNAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTG                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF310127             [                                                                                                         ttttTTTTTTTTTTTACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCAGAGTCTTCTTTCCTCCTGCAATTGCCTGCAGATTTTGCAGCAGATGGATTGTGGCACTGGAGGAGTAGAGGTTGCAGCTAGCTAAAAGGAAGGAGGCCGCTGTGGCCGGCGGTAGCCGAGCTCCATGACGAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTGCTCCACCGGCGAGCTCTTCAGCCACAGCTCGAGCAGGCCTTGCAATGTGGTCGAGGGGGAGATTGCCTCGCCATGGCATGTGATCTCCACCTCATCTTCACTTGCTAGGTCAAGCTTATTCATGATGTACCTCTGGATCAAGGAAGTCTGCAGACTTCCATCTTTAATTCTCACGTAATATGTTGGTAGCTGAGGCAGCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTATTCCATCAT                                                                                                                  ]
[-] EMBL CF310126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTTGGTAGCTGAGGCAGCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTATTCCATCATGCAAAGCACCAGTTCTTGTAGAACCAATCTGTCCCTGCTGTGAATCAGCATGTTGTCCTTTCCTCAGCTCATAGTCTGAGGTGGTTTTATCTTTCGATGATGCAGATTGTGAAG]


>consensus_5346#0 TTTTTTTTTTTTTTTTTTTNAGCCAAAGGCACTGTTCTACCTTTTTTTTTAATCTTTTGN CCCTCTTTACATGATCTAANAAATGANAAAGGGGNAATTTTTTCTTCTCTTTTTTTTTTT ACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCANAGTC TTNTTTCCTCCTGCAATTGCCTGCANATTTTGCAGCANATGGATTGGGGCACTGGAGGAG TANAGGTTGCAGCTAGCTAANAGGAAGGAGGCCGCTGNGGCCGGCGGTAGCCGAGCTCCA TGACNAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTGCTCCACCGGCGAGCTCT TCAGCCACAGCTCGAGCAGGCCTTGCAATGTGGTCGAGGGGGAGATTGCCTCGCCATGGC ATGTGATCTCCACCTCATCTTCACTTGCTAGGTCAAGCTTATTCATGATGTACCTCTGGA TCAAGGAAGTCTGCAGACTTCCATCTTTAATTCTCACGTAATATGTTGGTAGCTGAGGCA GCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTA TTCCATCATGCAAAGCACCAGTTCTTGTAGAACCAATCTGTCCCTGCTGTGAATCAGCAT GTTGTCCTTTCCTCAGCTCATAGTCTGAGGTGGTTTTATCTTTCGATGATGCAGATTGTG AAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)