cluster # 5349

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Oryza sativa
cluster # 5349 cluster # 5349 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5349#0 length = 684 sequences # 3

consensusID : consensus_5349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 684
fasta sequence

                              [CTCAGAAACATCAACATGGCTCTCGATCACGGACGCGACCCCTGTCCTTGGGTCATTCTCAATGATTTCGGCGGTGCCTTCGCCATGGGCGCGATCGGCGGCACAATTTGGCACGGCATCAAGGGGTTCCGCAACAGCCCATACGGCGAGAGACGGATAGGTGCCATCACGGCAGTCAAGATGCGTGCGCCCGTTCTCGGTGGCAACTTCGGTGTCTGGGGCGGTCTCTTCAGCACATTCGACTGCGCCATCAAGGGCGTTCGGAAGAAGGAGGACCCCTGGAACGCCATCGGAGCAGGCTTCATGACTGGTGGTTCCCTGGCCATCCGGGGAGGATACAAGGCTGCAAGGAACGGTGCTATCGGTTGCGCCATCCTGCTCGCGGTCATCGAGGGTGTGGGTATTGGTCTTTCGAAGATGATGGCAGGCAGCACAAAGCTTGAGGTTCCTCAACCACCGCCAAATGAGCAAGCTCTTGCATGAGGAGCCTGCAACAACTTCAACTCTCTCAACTCTCCCCTGGCATTGTATTTATAGCCTTTGATTTTTGAAGCACACACCCACACCTCATTTCGACGATGTACAACATTTCCTCATTAGCTATCAGCTGGTACTCAACCTGGACAAGGCTGCAGTACGTTGGAAAAGATCAGCCCATCTTCTCGCGTTCACACTACGTGCACT]

[+] EMBL CB000609             [CTCAGAAACATCAACATGGCTCTCGATCACGGACGCGACCCCTGTCCTTGGGTCATTCTCAATGATTTCGGCGGTGCCTTCGCCATGGGCGCGATCGGCGGCACAATTTGGCACGGCATCAAGGGGTTCCGCAACAGCCCATACGGCGAGAGACGGATAGGTGCCATCACGGCAGTCAAGATGCGTGCGCCCGTTCTCGGTGGCAACTTCGGTGTCTGGGGCGGTCTCTTCAGCACATTCGACTGCGCCATCAAGGGCGTTCGGAAGAAGGAGGACCCCTGGAACGCCATCGGAGCAGGCTTCATGACTGGTGGTTCCCTGGCCATCCGGGGAGGATACAAGGCTGCAAGGAACGGTGCTATCGGTTGCGCCATCCTGCTCGCGGTCATCGAGGGTGTGGGTATTGGTCTTTCGAAGATGATGGCAGGCAGCACAAAGCTTGAGGTTCCTCAACCACCGCCAAATGAGCAAGCTCTTGCATGAGGAGCCTGCAACAACTTCAACTCTCTCAACTCTCCCCTGGCATTGTATTTATAGCCTTTGATTTTTGAAGCACACACCCACACCTCATTTCGACGATGTACAACATTTCCTCATTAGCTATCAGCTGGTACTCAACCTGGACAAGGCTGCAGTACGTTGGAAAAGATCAGCCCATCTTCTCGCGTTCACACTACGTGCACT]
[+] EMBL CB000726             [CTCAGAAACATCAACATGGCTCTCGATCACGGACGCGACCCCTGTCCTTGGGTCATTCTCAATGATTTCGGCGGTGCCTTCGCCATGGGCGCGATCGGCGGCACAATTTGGCACGGCATCAAGGGGTTCCGCAACAGCCCATACGGCGAGAGACGGATAGGTGCCATCACGGCAGTCAAGATGCGTGCGCCCGTTCTCGGTGGCAACTTCGGTGTCTGGGGCGGTCTCTTCAGCACATTCGACTGCGCCATCAAGGGCGTTCGGAAGAAGGAGGACCCCTGGAACGCCATCGGAGCAGGCTTCATGACTGGTGGTTCCCTGGCCATCCGGGGAGGATACAAGGCTGCAAGGAACGGTGCTATCGGTTGCGCCATCCTGCTCGCGGTCATCGAGGGTGTGGGTATTGGTCTTTCGAAGATGATGGCAGGCAGCACAAAGCTTGAGGTTCCTCAACCACCGCCAAATGAGCAAGCTCTTGCATGAGGAGCCTGCAACAACTTCAACTCTCTCAACTCTCCCCTGGCATTGTATTTATAGCCTTTGATTTTTGAAGCACACACCCACACCTCATTTCGACGATGTACAACATTTCCTCATTA                                                                                     ]
[+] EMBL CA998761             [                       CGATCACGGACGCTACCCCTGTCCTTGGGTCATTCTCAATGATTTCGGCGGTGCCTTCGCCATGGGCGCGATCGGCGGCACAATTTGGCACGGCATCAAGGGGTTCCGCAACAGCCCATACGGCGAGAGACGGATAGGTGCCATCACGGCAGTCAAGATGCGTGCGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_5349#0
CTCAGAAACATCAACATGGCTCTCGATCACGGACGCGACCCCTGTCCTTGGGTCATTCTC
AATGATTTCGGCGGTGCCTTCGCCATGGGCGCGATCGGCGGCACAATTTGGCACGGCATC
AAGGGGTTCCGCAACAGCCCATACGGCGAGAGACGGATAGGTGCCATCACGGCAGTCAAG
ATGCGTGCGCCCGTTCTCGGTGGCAACTTCGGTGTCTGGGGCGGTCTCTTCAGCACATTC
GACTGCGCCATCAAGGGCGTTCGGAAGAAGGAGGACCCCTGGAACGCCATCGGAGCAGGC
TTCATGACTGGTGGTTCCCTGGCCATCCGGGGAGGATACAAGGCTGCAAGGAACGGTGCT
ATCGGTTGCGCCATCCTGCTCGCGGTCATCGAGGGTGTGGGTATTGGTCTTTCGAAGATG
ATGGCAGGCAGCACAAAGCTTGAGGTTCCTCAACCACCGCCAAATGAGCAAGCTCTTGCA
TGAGGAGCCTGCAACAACTTCAACTCTCTCAACTCTCCCCTGGCATTGTATTTATAGCCT
TTGATTTTTGAAGCACACACCCACACCTCATTTCGACGATGTACAACATTTCCTCATTAG
CTATCAGCTGGTACTCAACCTGGACAAGGCTGCAGTACGTTGGAAAAGATCAGCCCATCT
TCTCGCGTTCACACTACGTGCACT

clustalw multiple alignements is not computed in this case