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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 535 cluster # 535       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_535#0 length = 671 sequences # 2  

consensusID : consensus_535#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 671
fasta sequence
                              [ATTTGTCGCCGGCTATATAATATATCGGACGTCCAGACGACGTCACTCTTTACTCCGATCCGTTTCATGGCATCAGAAGCTGCTACGACCTGCATCGGGTTTATCCTCCTCACAGCAAGCTCGATCGCTGCGATCCACAGGTCACACGGAGAAATCACCGAGACGTCGTTCATCGTCGTGTCGTACCTCAGCCTTGTGCTGCTCTTCGTGTTCCTCCGCCGCTTCGAGGCGGCGCCGCGGAATTCGCCGGCGAGGGGCGGCGCCAAGGCCGGCGTATGGGTCGTCACGGCGCTGCTCGCCGCGGTGTTCTCGTGGAGGGTTTCCGCGCTCATGCCGTGGCCGGTGGATGCGATTATTTGGGTGATGGCCGCCTCAACTGTTCTTGGGGGATTCTACGCCTTGTTCCTTCATCATCCCGGCGTAGACTGAAAATGATCGATCGATCGATCGACATGCTGAAGCAATGGAACAGTTAATTCCTGTGTAAATATCGTTACGTACTGGCTGCTAGCTATTGGATATTGCAAATGTTTGGTTCTTTCTTCACATGTATATATACATATCTAGCTTTACTTTATATATACATAAACCATTGTACATGTACAAATGTTACCCAAAATGTATTAATTGTAGTAGTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK111114             [ATTTGTCGCCGGCTATATAATATATCGGACGTCCAGACGACGTCACTCTTTACTCCGATCCGTTTCATGGCATCAGAAGCTGCTACGACCTGCATCGGGTTTATCCTCCTCACAGCAAGCTCGATCGCTGCGATCCACAGGTCACACGGAGAAATCACCGAGACGTCGTTCATCGTCGTGTCGTACCTCAGCCTTGTGCTGCTCTTCGTGTTCCTCCGCCGCTTCGAGGCGGCGCCGCGGAATTCGCCGGCGAGGGGCGGCGCCAAGGCCGGCGTATGGGTCGTCACGGCGCTGCTCGCCGCGGTGTTCTCGTGGAGGGTTTCCGCGCTCATGCCGTGGCCGGTGGATGCGATTATTTGGGTGATGGCCGCCTCAACTGTTCTTGGGGGATTCTACGCCTTGTTCCTTCATCATCCCGGCGTAGACTGAAAATGATCGATCGATCGATCGACATGCTGAAGCAATGGAACAGTTAATTCCTGTGTAAATATCGTTACGTACTGGCTGCTAGCTATTGGATATTGCAAATGTTTGGTTCTTTCTTCACATGTATATATACATATCTAGCTTTACTTTATATATACATAA                                                                                   ]
[+] EMBL AT003497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTAATTCCTGTGTAAAAATCGTTACGTACTGGTTGCTAGCTATTGGATATTGCAAATGTTTGGTTCTTTTTACCCATGTATATATACATATCTAGCTTTACTTTATATATACATAAACCATTGTACATGTACAAATGTTACCCAAAATGTATTAATTGTAGTAGTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_535#0 ATTTGTCGCCGGCTATATAATATATCGGACGTCCAGACGACGTCACTCTTTACTCCGATC CGTTTCATGGCATCAGAAGCTGCTACGACCTGCATCGGGTTTATCCTCCTCACAGCAAGC TCGATCGCTGCGATCCACAGGTCACACGGAGAAATCACCGAGACGTCGTTCATCGTCGTG TCGTACCTCAGCCTTGTGCTGCTCTTCGTGTTCCTCCGCCGCTTCGAGGCGGCGCCGCGG AATTCGCCGGCGAGGGGCGGCGCCAAGGCCGGCGTATGGGTCGTCACGGCGCTGCTCGCC GCGGTGTTCTCGTGGAGGGTTTCCGCGCTCATGCCGTGGCCGGTGGATGCGATTATTTGG GTGATGGCCGCCTCAACTGTTCTTGGGGGATTCTACGCCTTGTTCCTTCATCATCCCGGC GTAGACTGAAAATGATCGATCGATCGATCGACATGCTGAAGCAATGGAACAGTTAATTCC TGTGTAAATATCGTTACGTACTGGCTGCTAGCTATTGGATATTGCAAATGTTTGGTTCTT TCTTCACATGTATATATACATATCTAGCTTTACTTTATATATACATAAACCATTGTACAT GTACAAATGTTACCCAAAATGTATTAATTGTAGTAGTAGTAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)