These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5354#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1784 fasta sequence [ATCCATCCATCCTGAGAAAGTGCAGCGCGGAGAGAAGGACGCCGCCGACCAGATGCCGCCTCAGGCTCCGTCTCCGGCTCCGGCTCCCTCCGGCAGTGTCGGCGGCGCGGCGTGGCGCCACTTGCTTCTCCTCCTGACGGGCCTTCCACTCGCGCTCGCCGCCCTGGCCTTCGCTCTGCAGTGGCGCGGTGGCGGCGTCGACGATCCCACCGCGCGATGGCCCCCCCACGCCTTCCCCGGCATGGGCATGACTGATCCTACGCCACCTTCCCTCCCCTCCTCCGCATGCGGCGAGGTCCTCATCGCCTCCTCTGGCCCCTCCTTCCCCTACCTCCGCGGCTGGTCTTTCCCTTTCGATTCCGATTCCGACGCGGCCCTCCACCCCAAGGTGTGCGTCCAGACGAGCACCTCCGCCGGGTTGGACCAGATCCTCCCGTGGCTCTTCTACCACAAGGTTGTCGGCGTCGCGCAATTCCTACTCTTCGTCGAGGGCAGGGCGGCCAAGCCCCAAGTCGCGGGGGTCCTTGAGTCCATTCCTGTGGGGAGTGAAGGTGGTGTACAGGACTCAGGAACTTGAGGAGCAACAGGCCCGGAGTCGAATCTGGAACGAAACATGGCTTGCAGGTTTTTTCTACAAACCTTGCAACTATGAACTATTTGTGAAACAATCGCTCAACATGGAGATGGCTATTGTGATGGCTCGGGATGCGGCAATGGATTGGATCATACATCTAGACACTGATGAATTACTATATCCTGGTGGAGGTGCTGAGTATTCTGTCAGACATTTGTTAGCTGACGTCCCTGGTGATGTTGACATGGTTATCTTTCCAAACTATGAAAGCAGTGTTGAACGAGATGATATAAAAGATCCATTCAGCGAGGTATCTATGTTTAAGAAGAATTATGATCATCTCCCAAAAGATACTTACTTTGGCATGTATAAGGAAGCAACACGTGGAAATCCTAACTATTTTCTCACTTATGGTAATGGAAAATCTGCTGCCCGAGTTCAAGATCATCTGCGCCCAAATGGTGCACACAGATGGCACAATTATGCGAAGAGCCCAAATGAAATCAAGCTGGAGGAGGCTGCTGTTTTGCACTATACATACACAAAATTTTCAGACTTAACATCTAGACGTGATCGCTGTGGATGCAAACCCACAAAAGACGATGTGAAAAGATGCTTCATGTTGGATTTTGACAGAGCGGCATTTATAATCGCATCAACTGCTAGTGAAGAGGAAATGCTTCGCTGGTACAATGAACGAGTTGTGTGGAATGATAAGCAGCTCAATCTAAAGCTTCTCAGGAAAGGAGTGCTGACTCGCATATACACCCCAATGGCAATTGTTCAAGGTCTACGTGA-GTCTGGTGTCTTCACTTCTTTCATTGCAGCTGCCCAATCACTTGTGAATGACAAGGTCTCGTTGAAGGAAAACAATGTTCAAAACAAAAATCATACGAAATTAGAAAAGGTATCTAGAAAATTCATCAGAGCTAATTCTCAGGCATCTGCCAGGAAAATACTGCACGCTGTTGAGCCTGCCAGCCATGATAGTAATGTATCTGCTGTTCCACCTTTGTCACCACCTAGTTTGGATAATCACCTCCTGGAGCTTAGCTAGTGAATCACCACTTGCAAGAATTCCTCTTGATTGCAAGTTACCTCTGGTACTGACATGAGCATGGATGACCAAACTGTCTCTACGGTTTGTGGCAGCTAACTTTTTAGTGAGCATCCTTTTGGTGATGAAAGTATATATATAGTACTTCAGTCC] [+] EMBL AK060522 [ATCCATCCATCCTGAGAAAGTGCAGCGCGGAGAGAAGGACGCCGCCGACCAGATGCCGCCTCAGGCTCCGTCTCCGGCTCCGGCTCCCTCCGGCAGTGTCGGCGGCGCGGCGTGGCGCCACTTGCTTCTCCTCCTGACGGGCCTTCCACTCGCGCTCGCCGCCCTGGCCTTCGCTCTGCAGTGGCGCGGTGGCGGCGTCGACGATCCCACCGCGCGATGGCCCCCCCACGCCTTCCCCGGCATGGGCATGACTGATCCTACGCCACCTTCCCTCCCCTCCTCCGCATGCGGCGAGGTCCTCATCGCCTCCTCTGGCCCCTCCTTCCCCTACCTCCGCGGCTGGTCTTTCCCTTTCGATTCCGATTCCGACGCGGCCCTCCACCCCAAGGTGTGCGTCCAGACGAGCACCTCCGCCGGGTTGGACCAGATCCTCCCGTGGCTCTTCTACCACAAGGTTGTCGGCGTCGCGCAATTCCTACTCTTCGTCGAGGGCAGGGCGGCCAAGCCCCAAGTCGCGGGGGTCCTTGAGTCCATTCCTGTGGGGAGTGAAGGTGGTGTACAGGACTCAGGAACTTGAGGAGCAACAGGCCCGGAGTCGAATCTGGAACGAAACATGGCTTGCAGGTTTTTTCTACAAACCTTGCAACTATGAACTATTTGTGAAACAATCGCTCAACATGGAGATGGCTATTGTGATGGCTCGGGATGCGGCAATGGATTGGATCATACATCTAGACACTGATGAATTACTATATCCTGGTGGAGGTGCTGAGTATTCTGTCAGACATTTGTTAGCTGACGTCCCTGGTGATGTTGACATGGTTATCTTTCCAAACTATGAAAGCAGTGTTGAACGAGATGATATAAAAGATCCATTCAGCGAGGTATCTATGTTTAAGAAGAATTATGATCATCTCCCAAAAGATACTTACTTTGGCATGTATAAGGAAGCAACACGTGGAAATCCTAACTATTTTCTCACTTATGGTAATGGAAAATCTGCTGCCCGAGTTCAAGATCATCTGCGCCCAAATGGTGCACACAGATGGCACAATTATGCGAAGAGCCCAAATGAAATCAAGCTGGAGGAGGCTGCTGTTTTGCACTATACATACACAAAATTTTCAGACTTAACATCTAGACGTGATCGCTGTGGATGCAAACCCACAAAAGACGATGTGAAAAGATGCTTCATGTTGGATTTTGACAGAGCGGCATTTATAATCGCATCAACTGCTAGTGAAGAGGAAATGCTTCGCTGGTACAATGAACGAGTTGTGTGGAATGATAAGCAGCTCAATCTAAAGCTTCTCAGGAAAGGAGTGCTGACTCGCATATACACCCCAATGGCAATTGTTCAAGGTCTACGTGA GTCTGGTGTCTTCACTTCTTCCATTGCAGCTGCCCAATCACTTGTGAATGACAAGGTCTCGTTGAAGGAAAACAATGTTCAAAACAAAAATCATACGAAATTAGAAAAGGTATCTAGAAAATTCATCAGAGCTAATTCTCAGGCATCTGCCAGGAAAATACTGCACGCTGTTGAGCCTGCCAGCCATGATAGTAATGTATCTGCTGTTCCACCTTTGTCACCACCTAGTTTGGATAATCACCTCCTGGAGCTTAGCTAGTGAATCACCACTTGCAAGAATTCCTCTTGATTGCAAGTTACCTCTGGTACTGACATGAGCATGGATGACCAAACTGTCTCTACGGTTTGTGGCAGCTAACTTTTTAGTGAGCATCCTTTTGGTGATGAAAGTATATATATAGT ] [+] EMBL CA998829 [ AAGCTTCTCAGGAAAGGAGTGCTGACTCGCATATACACCCCAATGGCAATTGTTCAAGGTCTACGTGA GTCTGGTGTCTTCACTTCTTTCATTGCAGCTGCCCAATCACTTGTGAATGACAAGGTCTCGTTGAAGGAAAACAATGTTCAAAACAAAAATCATACGAAATTAGAAAAGGTATCTAGAAAATTCATCAGAGCTAATTCTCAGGCATCTGCCAGGAAAATACTGCACGCTGTTGAGCCTGCCAGCCATGATAGTAATGTATCTGCTGTTCCACCTTTGTCACCACCTAGTTTGGATAATCACCTCCTGGAGCTTAGCTAGTGAATCACCACTTGCAAGAATTCCTCTTGATTGCAAGTTACCTCTGGTACTGACATGAGCATGGATGACCAAACTGTCTCTACGGTTTGTGGCAGCTAACTTTTTAGTGAGCATCCTTTTGGTGATGAAAGTATATATATAGTACTTCAGTCC] [+] EMBL CA998828 [ AAGCTTCTCAGGAAAGGAGTGCTGACTCGCATATACACCCCAATGGCAATTGTTCAAAGTCTACGTGAGGTCTGGTGTCTTCACTTCTTTCATTGCAGCTGCCCAATCACTTGTGAATGACAAAGTCTCGTTGAAGGAAAACAATGTTCAAAACAAAAATCATACGAAATTAGAAAAGGTATCTAGAAAATTCATCAGAGCTAATTCTCAGGCATCTGCCAGGAAAATACTGCACGCTGTTGAGCCTGCCAGCCATGATAGGAATGTATCTGCTGTTCCACCTTTGTCACCACCTAGTTTGGATAATCACCTCCTGGAGCTTAGCTAGTGAATCACCACTTGCAAGAATTCCTCTTGATTGCAAGGTACCTCTGG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||