cluster # 5357

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Oryza sativa
cluster # 5357 cluster # 5357 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5357#0 length = 385 sequences # 3

consensusID : consensus_5357#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 385
fasta sequence

                              [GGTNTNCTGGTAGCATCACATACGCTAATAATGGATTAATTAGGCTCAATAGATTCATCTCGCAAATTAGTCCAGGGTTATGGAATAGGCTTTATTATTAGTCTATGTTTAATACTTCTAAATAGTGTCCAAACATTCGATGTGACAGGGATTGAAAAATTTTNGCCCCATCCAAACCCAATCTAAACCATTATTGTTATTACTTTTTATTGTGCATTACTACCATTCCACCATTCCATCGTGATGTTACTACAAGTGTACCATAACAACTATATTTTATGCAGTAACATAGCGTGTAGGTATTACTGCAATAACATGTGGGTAACTACCGGACACATGGCCCANGGACTACCATCCACCTTGGACTGGC-AAGNTAAGGTGCAAG]

[+] EMBL OSS2388A             [GGTNTNCTGGTAGCATCACATACGCTAATAATGGATTANNATGGCTCAATAGATTCATCTCGCAAATTAGTCCAGGGTTATGGAATAGGCTTTATTATTAGTCTATGTTTAATACTTCTAAATAGTGTCCAAACATTCGATGTGACAGGGATTGAAAAATTTTNGCCCCATCCAAACCCAATCTAAACCATTATTGT                                                                                                                                                                                             ]
[+] EMBL OSS1774A             [  TNTNCTGGTAGCATCACATACNCTATTAATGGATTAATTAGGCTCAATAGATTCATCTCGCAAATTAGTCCAGGGTTATGGAATAGGCTTTATTATTAGTCTATGTTTAATACTTCTAAATAGTGTCCAAACATTCGATGTGACAGGGATTGAAAAATTTTAGCCCCATCCAAACCCAATCTAAACCATTATTGTTATTACTTTTTATTGTGCATTACTACCATTCCACCATTCCATCGTGATGTTACTACAAGTGTACCATAACAACTATATTTTATGCAGTAACATAGCGTGTAGGTATTACTGCAATAACATGTGGGTAACTACCGGACACATGGCCCANGGACTACCATCCACCTTGGACTGGC AAGNTAAGGTGCAA ]
[+] EMBL OSS2265A             [   tTNCTGGTAGCATCACATACGCTAATAATGGATTAATTAGGCTCAATAGATTCATCTCGCAAATTAGTCCAGGGTTATGGAATAGGCTTTATTATTAGTCTATGTTTAATACTTCTAAATAGTGTCCAAACATTCGATGTGACAGGGATTGAAAAATTTNNGCCCCATCCAAACCCAATCTAAACCATTATTGTTATTACTTTTTATTGTGCATTACTACCATTCCACCATTCCATCGTGATGTTACTACAAGTGTACCATAACAACTATATTTNANGCAGTAACATAGCGTGTA GTATTACTGCAATAACATGT GGTAACTACCGAACACAT GTCCAAGAACTACCATCCACCTTGAACTAGCAAAGCTAA GTGCAAG]




>consensus_5357#0
GGTNTNCTGGTAGCATCACATACGCTAATAATGGATTAATTAGGCTCAATAGATTCATCT
CGCAAATTAGTCCAGGGTTATGGAATAGGCTTTATTATTAGTCTATGTTTAATACTTCTA
AATAGTGTCCAAACATTCGATGTGACAGGGATTGAAAAATTTTNGCCCCATCCAAACCCA
ATCTAAACCATTATTGTTATTACTTTTTATTGTGCATTACTACCATTCCACCATTCCATC
GTGATGTTACTACAAGTGTACCATAACAACTATATTTTATGCAGTAACATAGCGTGTAGG
TATTACTGCAATAACATGTGGGTAACTACCGGACACATGGCCCANGGACTACCATCCACC
TTGGACTGGCAAGNTAAGGTGCAAG

clustalw multiple alignements is not computed in this case