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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5362 cluster # 5362       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5362#0 length = 935 sequences # 3  

consensusID : consensus_5362#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 935
fasta sequence
                              [TTTTTTTTTTTTATACGAAGTGTCTCGGATCTGCTTTGAAGTCGCTATCGTGCCAACGAGATCAAAACCCATTAGATCCAGACGCAGCATTTGCCTGTAGGAACTAGCATACACTGATCCAAACGGAATCATTCTACAGAACAGAACACCAACATATCAAAAAGGGAAACAAGAAAAAAGCTATCCATCCTGTGCTGTCCGGCTGTTTGGCCTTACACATGTCTTCTACTACACCTCTGATTAAACAACCACCATTCACCCCCAACAACCTGAGTACCAACGCTAAACTAAGACCGATACAGCATTTTCTTTGAGACGAGGGCACAATCTACTTTACTTATTCTCGCCTAAGCTACCGATTACTCAGGTTTATTTGTAAAGTTCCTCAACAATCTCAGCCTTCTTTGGGCAGCGGACTAGAAGAACTTCTCGTAGTCATCCTGTGTTGGCTGCCCCCAGACATCCATGAAACCAATATCAGTGAGAGACCCATATATTGGATCATCCATGACAGTGATACCCTCAGAATCATTAGCACCTATACCACCATGAAGATCTGATTGCATTGATGGGTAGCATGGTATATCACCACCAAGATAATCAGAAATTGCAAGATTGTAACCATCTTGAATACCAGGAAGATCACCACTGTGTACAACAGGGCCCATCATGTTATCCATGTTAGAGCATATCATGTCGCTCTTTGCTTTTGAAGAATCAAAGCCACCAACTTCAATCGGTGTGTCATCTTCTATATCAATTACTTGGACACCCTTATTATCTAATGGAAGTTGGCACATATTATTTGTACTACCAGCAATATCACCTGAAGTGGTTACAAAATCTTGATGCTGGTTTTTCTGTGACTCTGTGCAAGATCCTTCTGTAGAGCATTGGGCCAAACCAGGATTATTATGTATCACAGAAACCTCAGA]

[-] EMBL CA998950             [TTTTTTTTTTTTATACGAAGTGTCTCGGATCTGCTTTGAAGTCGCTATCGTGCCAACGAGATCAAAACCCATTAGATCCAGACGCAGCATTTGCCTGTAGGAACTAGCATACACTGATCCAAACGGAATCATTCTACAGAACAGAACACCAACATATCAAAAAGGGAAACAAGAAAAAAGCTATCCATCCTGTGCTGTCCGGCTGTTTGGCCTTACACATGTCTTCTACTACACCTCTGATTAAACAACCACCATTCACCCCCAACAACCTGAGTACCAACGCTAAACTAAGACCGATACAGCATTTTCTTTGAGACGAGGGCACAATCTACTTTACTTATTCTCGCCTAAGCTACCGATTACTCAGGTTTATTTGTAAAGTTCCTCAACAATCTCAGCCTTCTTTGGGCAGCGGACTAGAAGAACTTCTCGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB632959             [                                                                                                     AACTAGCATACACTGATCCAAACGGAATCATTCTACAGAAGAGAACACCAACATATCAAAAAGGGAAACAAGAAAAAAGCTATCCATCCTGTGCTGTCCGGCTGTTTGGCCTTACACATGTCTTCTACTACACCTCTGATTAAACAACCACCATTCACCCCCAACAACCTGAGTACCAACGCTAAACTAAGACCGATACAGCATTTTCTTTGAGACGAGGGCACAATCTACTTTACTTATTCTCGCCTAAGCTACCGATTACTCAGGTTTATTTGTAAAGTTCCTCAACAATCTCAGCCTTCTTTGGGCAGCGGACTAGAAGAACTTCTCGTAGTCATCCTGTGTTGGCTGCCCCCAGACATCCATGAAACCAATATCAGTGAGAGACCCATATATTGGATCATCCATGACAGTGATACCCTCAGAATCATTAGCACCTATACCACCATGAAGATCTGATTGCATTGATGGGTAGCATGGTATATCACCACCAAGATAATCAGAAATTGCAAGATTGTAACCATCTTGAATACCAGGAAGATCACCACTGTGTACAACAGGGCCCATCATGTTATCCATGTTAGAGCATATCATGTCGCTCTTTGCTTTTGAAGAATCAAAGCCACCAACTTCAATCGGTGTGTCATCTTCTATATCAATTACTTGGACACCCTTATTATCTAATGGAAGTTGGCACATATTATTTGTACTACCAGCAATATCACCTGAAGTGGTTACAAAATCTTGATGCTGGTTTTTCTGTGACTCTGTGCAAGATCCTTCTGTAGAGCATTGGGCCAAACCAGGATTATTATGTATCACAGAAACCTCAGA]
[-] EMBL CA999879             [                                                                                                                                                                                                                                                                        ACAACCTGAGTACCAACGCTAAACTAAGACCGATACAGCATTTTCTTTGAGACGAGGGCACAATCTACTTTACTTATTCTCGCCTAAGCTACCGATTACTCAGGTTTATTTGTAAAGTTCCTCAACAATCTCAGCCTTCTTTGGGCAGCGGACTAGAAGAACTTCTCGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_5362#0 TTTTTTTTTTTTATACGAAGTGTCTCGGATCTGCTTTGAAGTCGCTATCGTGCCAACGAG ATCAAAACCCATTAGATCCAGACGCAGCATTTGCCTGTAGGAACTAGCATACACTGATCC AAACGGAATCATTCTACAGAACAGAACACCAACATATCAAAAAGGGAAACAAGAAAAAAG CTATCCATCCTGTGCTGTCCGGCTGTTTGGCCTTACACATGTCTTCTACTACACCTCTGA TTAAACAACCACCATTCACCCCCAACAACCTGAGTACCAACGCTAAACTAAGACCGATAC AGCATTTTCTTTGAGACGAGGGCACAATCTACTTTACTTATTCTCGCCTAAGCTACCGAT TACTCAGGTTTATTTGTAAAGTTCCTCAACAATCTCAGCCTTCTTTGGGCAGCGGACTAG AAGAACTTCTCGTAGTCATCCTGTGTTGGCTGCCCCCAGACATCCATGAAACCAATATCA GTGAGAGACCCATATATTGGATCATCCATGACAGTGATACCCTCAGAATCATTAGCACCT ATACCACCATGAAGATCTGATTGCATTGATGGGTAGCATGGTATATCACCACCAAGATAA TCAGAAATTGCAAGATTGTAACCATCTTGAATACCAGGAAGATCACCACTGTGTACAACA GGGCCCATCATGTTATCCATGTTAGAGCATATCATGTCGCTCTTTGCTTTTGAAGAATCA AAGCCACCAACTTCAATCGGTGTGTCATCTTCTATATCAATTACTTGGACACCCTTATTA TCTAATGGAAGTTGGCACATATTATTTGTACTACCAGCAATATCACCTGAAGTGGTTACA AAATCTTGATGCTGGTTTTTCTGTGACTCTGTGCAAGATCCTTCTGTAGAGCATTGGGCC AAACCAGGATTATTATGTATCACAGAAACCTCAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)