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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5370 cluster # 5370       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5370#0 length = 673 sequences # 3  

consensusID : consensus_5370#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 673
fasta sequence
                              [AAGGGCGGCGAGTTCAGCGAGGCCGGCACCAGCAGCAGGACGAGCAGCACCAACAGCACTAGCAGCGGCGGCCATGGAAGCAGCAGCAGCAGCAGCATCGGAAATGGCCATGGCGGCGGCAACCCGAAGGCTCAAACAACCAGGAGCAGGAGCAGAAAGAGAATTGGGTGCTATGGTTTCTTCAAGAAAAACAAAAGCAAAAATGGAGGTGCTGAAGATTAGAACATGATGCAAATGAAGAAGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAAGCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATA-CA-TAAAATC-AGTG-CAAGATGCATGAAACGATATGACACCA-GTGAAAAGTGCAATGTGCACCACTATGACT-GGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTTCTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGACGCGCCAAAAAAA]

[+] EMBL CK085217             [AAGGGCGGCGAGTTCAGCGAGGCCGGCACCAGCAGCAGGACGAGCAGCACCAACAGCACTAGCAGCGGCGGCCATGGAAGCAGCAGCAGCAGCAGCATCGGAAATGGCCATGGCGGCGGCAACCCGAAGGCTCAAACAACCAGGAGCAGGAGCAGAAAGAGAATTGGGTGCTATGGTTTCTTCAAGAAAAACAAAAGCAAAAATGGAGGTGCTGAAGATTAGAACATGATGCAAATGAAGAAGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAAGCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATA CA TAAAATC AGTG CAAGATGCATGAAACGATATGACACCA GTGAAAAGTGCAATGTGCACCACTATGACT GGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAA                                                                            ]
[+] EMBL AU174278             [                                                                                                                                                                                                                                                 AGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAAGCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATA CA TAAAATC AGTG CAAGATGCATGAAACGATATGACACCA GTGAAAAGTGCAATGTGCACCACTATGACT GGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTTCTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGACGCGCCAAAAAAA]
[+] EMBL AU097258             [                                                                                                                                                                                                                                                                                                                                                            tgGCATACCATTAAAATCAAGTGCCAAGATGCATGAAACGATATGACACCAGGTGAAAAGTGCAATGTGCACCACTATGACTGGGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTTCTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGACGCGCCAAAA   ]


>consensus_5370#0 AAGGGCGGCGAGTTCAGCGAGGCCGGCACCAGCAGCAGGACGAGCAGCACCAACAGCACT AGCAGCGGCGGCCATGGAAGCAGCAGCAGCAGCAGCATCGGAAATGGCCATGGCGGCGGC AACCCGAAGGCTCAAACAACCAGGAGCAGGAGCAGAAAGAGAATTGGGTGCTATGGTTTC TTCAAGAAAAACAAAAGCAAAAATGGAGGTGCTGAAGATTAGAACATGATGCAAATGAAG AAGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAA GCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATACATAA AATCAGTGCAAGATGCATGAAACGATATGACACCAGTGAAAAGTGCAATGTGCACCACTA TGACTGGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGA GGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTC TGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTT CTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGA CGCGCCAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)