cluster # 5383

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Oryza sativa
cluster # 5383 cluster # 5383 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5383#0 length = 1690 sequences # 3
consensusID : consensus_5383#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1690
fasta sequence
                              [CATATGATAGCACTCCTTTATGTGGAAAGGAGAAAAGTACTGTATACAATTAGGGTATGATGAACTTGGGGATTCATCCAACTTTTCTTGGTTGAAGCAAGCAAATCCTTTTTTACTAGTACATCATATCGTTGCTACTTCGAGGGGTTTGCTGGCAAACATGCACGGTGACCCAGATTTCGTTTGGGCTTTATTCAATCTTCCTTGAGTGTCCGTGCTGCATGGTCACACTTTTTTCTCTCGTCTGGGAAAGAATTGAGAGCCATTATAAGCTAGTTTCTGCAACCAAGAAATTAGTCCTTCATTTTGAAATCTGAGAAGAGCTTTTCTTTGTACGCAGAAATTAAGTCCCATTTGCTCAGACAATGCAAGCAATGCGGGCGGTGGATGATAAGGAGTGCTACAGCCACAGCATCCATGGCGAGTCGAATGGGCGGCCGCAGCGCAAGAACAATCCGGCATCAAGGCCGAAGCCGACGCCTTCCAAGTGGGACGACGCGCAGAAGTGGCTTGTTAGCCTGTCCAACGGCGGAGGCGGCGGCGTTGACGGGATCCACAGCGGCAAGGTGAGGCCAAGGAACTCCAACGCCGACGACCGGCGCCTTCTGAGCTCGTCCTCCCAGAACGGCCGCGTGTCCTGCAGCAGCGTGGACGGGGCGCTGGAGTACAACCTGGTGGCCGCTCCCCCGACGCCACCGCAGCTGGGTGAAGCCGCCGCCGACGACGTGAGTGAGACGAAGAAGATCGACTACTGCATGGTCCAACCGCAGCACGGCTCCCCCGCGGCGGTGCTCCGGTCGGTCTGCCTGCGGGACATGGGCACGGAGATGACCCCCATCGCCAGCAAGGAGCCGTCCAGGTCCGCCACTCCGCTGCGGGCGTCCACGCCCGTGTCGCGGAGCCCCGTACCGTCGCGGCCGTCTACGCCCGGCAGGCGGCGGTACGACGTGGCCGTGGGCGTTACCGCCGTGGTCGAGTCCAGGACGGCCGAGCCGGTGGCGGTAGGCAGTGTTAGCGACGGCGGCGGCTTCGGCGGGGGCTGTGCGGTGGACGAGAGTAGTAGCGGCGGGTTCGGCAACCATGCGCAGAGCACGACGACCGGGCTCGAGTCCCGCGCCGTGGCCTGGGACGAGGCCGAGCGGGCCAAATTCACGGCGAGGTACAAGCGTGAAGAGATGAAGATACAAGCATGGGAGAACCACGAGAAGAGAAAAGCTGAGCTGGAAATGAAGAAAATAGAGATGAAGGCAGAACAGATGAAAGCACGGGCGCACGAGAAGCTGGCCAACAAGCTGGCGGCTGCGCGGCGGATGGCCGAGGAGAAGCGGGCGACCGCGGAGGCTAAGCTTAACGAGCACGCCGCTAGAACCACGCAGAAGGCGGACTACATCAGGAGGACCGGGCACCTGCCCTCGTTCTTTTCCTTCAAGATGCCCTCCCTGTGTGGTTGATGAATGATGGTACCAAACTTTGCTTGTGTCATGTCCATGTCTTTCCAAGGCATTTAAGAAAATAATTTCCGAGTTTTTACTGCTCCACTGTGTGACCATGTGTTTCGTAACAGGGTGGAAAATATTTCCTGCTCGAATTTTTACATGGTCTTGCAGAAATCATGTGTTAGAGCAGTCTGCTTATCTCACATTTTTTAGTGAGCCTGGGAAGTCAAAAAAGGAAGGGATAGAAATGGGCC]

[+] EMBL AK101665             [CATATGATAGCACTCCTTTATGTGGAAAGGAGAAAAGTACTGTATACAATTAGGGTATGATGAACTTGGGGATTCATCCAACTTTTCTTGGTTGAAGCAAGCAAATCCTTTTTTACTAGTACATCATATCGTTGCTACTTCGAGGGGTTTGCTGGCAAACATGCACGGTGACCCAGATTTCGTTTGGGCTTTATTCAATCTTCCTTGAGTGTCCGTGCTGCATGGTCACACTTTTTTCTCTCGTCTGGGAAAGAATTGAGAGCCATTATAAGCTAGTTTCTGCAACCAAGAAATTAGTCCTTCATTTTGAAATCTGAGAAGAGCTTTTCTTTGTACGCAGAAATTAAGTCCCATTTGCTCAGACAATGCAAGCAATGCGGGCGGTGGATGATAAGGAGTGCTACAGCCACAGCATCCATGGCGAGTCGAATGGGCGGCCGCAGCGCAAGAACAATCCGGCATCAAGGCCGAAGCCGACGCCTTCCAAGTGGGACGACGCGCAGAAGTGGCTTGTTAGCCTGTCCAACGGCGGAGGCGGCGGCGTTGACGGGATCCACAGCGGCAAGGTGAGGCCAAGGAACTCCAACGCCGACGACCGGCGCCTTCTGAGCTCGTCCTCCCAGAACGGCCGCGTGTCCTGCAGCAGCGTGGACGGGGCGCTGGAGTACAACCTGGTGGCCGCTCCCCCGACGCCACCGCAGCTGGGTGAAGCCGCCGCCGACGACGTGAGTGAGACGAAGAAGATCGACTACTGCATGGTCCAACCGCAGCACGGCTCCCCCGCGGCGGTGCTCCGGTCGGTCTGCCTGCGGGACATGGGCACGGAGATGACCCCCATCGCCAGCAAGGAGCCGTCCAGGTCCGCCACTCCGCTGCGGGCGTCCACGCCCGTGTCGCGGAGCCCCGTACCGTCGCGGCCGTCTACGCCCGGCAGGCGGCGGTACGACGTGGCCGTGGGCGTTACCGCCGTGGTCGAGTCCAGGACGGCCGAGCCGGTGGCGGTAGGCAGTGTTAGCGACGGCGGCGGCTTCGGCGGGGGCTGTGCGGTGGACGAGAGTAGTAGCGGCGGGTTCGGCAACCATGCGCAGAGCACGACGACCGGGCTCGAGTCCCGCGCCGTGGCCTGGGACGAGGCCGAGCGGGCCAAATTCACGGCGAGGTACAAGCGTGAAGAGATGAAGATACAAGCATGGGAGAACCACGAGAAGAGAAAAGCTGAGCTGGAAATGAAGAAAATAGAGATGAAGGCAGAACAGATGAAAGCACGGGCGCACGAGAAGCTGGCCAACAAGCTGGCGGCTGCGCGGCGGATGGCCGAGGAGAAGCGGGCGACCGCGGAGGCTAAGCTTAACGAGCACGCCGCTAGAACCACGCAGAAGGCGGACTACATCAGGAGGACCGGGCACCTGCCCTCGTTCTTTTCCTTCAAGATGCCCTCCCTGTGTGGTTGATGAATGATGGTACCAAACTTTGCTTGTGTCATGTCCATGTCTTTCCAAGGCATTTAAGAAAATAATTTCCGAGTTT                                                                                                                                                                   ]
[+] EMBL CA999741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTGCCCTCGTTCTTTTCCTTCAAGATGCCCTCCCTGTGTGGTTGATGAATGATGGTACCAAACTTTGCTTGTGTCATGTCCATGTCTTTCCAAGGCATTTAAGAAAATAATTTCCGAGTTTTTACTGCTCCACTGTGTGACCATGTGTTTCGTAACAGGGTGGAAAATATTTCCTGCTCGAATTTTTACATGGTCTTGCAGAAATCATGTGTTAGAGCAGTCTGCTTATCTCACATTTTTTAGTGAGCCTGGGAAGTCAAAAAAGGAAGGGATAGAAATGGGCC]
[+] EMBL CA999746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTGCCCTCGTTCTTTTCCTTCAAGATGCCCTCCCTGTGTGGTTGATGAATGATGGTACCAAACTTTGCTTGTGTCATGTCCATGTCTTTCCAAGGCATTTAAGAAAATAATTTCCGAGTTTTTACTGCTCCACTGTGTGACCATGTGTTTCGTAACAGGGTGGAAAATATTTCCTGCTCGAATTTTTACATGGTCTTGCAGAAATCATGTGTTAGAGCAGTCTGCTTATCTCACATTTTTTAGTGAGCCTGG                                ]




>consensus_5383#0
CATATGATAGCACTCCTTTATGTGGAAAGGAGAAAAGTACTGTATACAATTAGGGTATGA
TGAACTTGGGGATTCATCCAACTTTTCTTGGTTGAAGCAAGCAAATCCTTTTTTACTAGT
ACATCATATCGTTGCTACTTCGAGGGGTTTGCTGGCAAACATGCACGGTGACCCAGATTT
CGTTTGGGCTTTATTCAATCTTCCTTGAGTGTCCGTGCTGCATGGTCACACTTTTTTCTC
TCGTCTGGGAAAGAATTGAGAGCCATTATAAGCTAGTTTCTGCAACCAAGAAATTAGTCC
TTCATTTTGAAATCTGAGAAGAGCTTTTCTTTGTACGCAGAAATTAAGTCCCATTTGCTC
AGACAATGCAAGCAATGCGGGCGGTGGATGATAAGGAGTGCTACAGCCACAGCATCCATG
GCGAGTCGAATGGGCGGCCGCAGCGCAAGAACAATCCGGCATCAAGGCCGAAGCCGACGC
CTTCCAAGTGGGACGACGCGCAGAAGTGGCTTGTTAGCCTGTCCAACGGCGGAGGCGGCG
GCGTTGACGGGATCCACAGCGGCAAGGTGAGGCCAAGGAACTCCAACGCCGACGACCGGC
GCCTTCTGAGCTCGTCCTCCCAGAACGGCCGCGTGTCCTGCAGCAGCGTGGACGGGGCGC
TGGAGTACAACCTGGTGGCCGCTCCCCCGACGCCACCGCAGCTGGGTGAAGCCGCCGCCG
ACGACGTGAGTGAGACGAAGAAGATCGACTACTGCATGGTCCAACCGCAGCACGGCTCCC
CCGCGGCGGTGCTCCGGTCGGTCTGCCTGCGGGACATGGGCACGGAGATGACCCCCATCG
CCAGCAAGGAGCCGTCCAGGTCCGCCACTCCGCTGCGGGCGTCCACGCCCGTGTCGCGGA
GCCCCGTACCGTCGCGGCCGTCTACGCCCGGCAGGCGGCGGTACGACGTGGCCGTGGGCG
TTACCGCCGTGGTCGAGTCCAGGACGGCCGAGCCGGTGGCGGTAGGCAGTGTTAGCGACG
GCGGCGGCTTCGGCGGGGGCTGTGCGGTGGACGAGAGTAGTAGCGGCGGGTTCGGCAACC
ATGCGCAGAGCACGACGACCGGGCTCGAGTCCCGCGCCGTGGCCTGGGACGAGGCCGAGC
GGGCCAAATTCACGGCGAGGTACAAGCGTGAAGAGATGAAGATACAAGCATGGGAGAACC
ACGAGAAGAGAAAAGCTGAGCTGGAAATGAAGAAAATAGAGATGAAGGCAGAACAGATGA
AAGCACGGGCGCACGAGAAGCTGGCCAACAAGCTGGCGGCTGCGCGGCGGATGGCCGAGG
AGAAGCGGGCGACCGCGGAGGCTAAGCTTAACGAGCACGCCGCTAGAACCACGCAGAAGG
CGGACTACATCAGGAGGACCGGGCACCTGCCCTCGTTCTTTTCCTTCAAGATGCCCTCCC
TGTGTGGTTGATGAATGATGGTACCAAACTTTGCTTGTGTCATGTCCATGTCTTTCCAAG
GCATTTAAGAAAATAATTTCCGAGTTTTTACTGCTCCACTGTGTGACCATGTGTTTCGTA
ACAGGGTGGAAAATATTTCCTGCTCGAATTTTTACATGGTCTTGCAGAAATCATGTGTTA
GAGCAGTCTGCTTATCTCACATTTTTTAGTGAGCCTGGGAAGTCAAAAAAGGAAGGGATA
GAAATGGGCC
clustalw multiple alignements is not computed in this case