cluster # 5386

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Oryza sativa
cluster # 5386 cluster # 5386 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5386#0 length = 671 sequences # 3

consensusID : consensus_5386#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 671
fasta sequence

                              [ACAACAAGTTCCACATGGGTAACTGTGCTGAGAACACCGCCAAGAAGCACAACATTACTCGTGAGCAGCAGGATGAGTATGCTATGCGCTCATACAAGAATGCTCAAGCTGCCTGGGCCAACAAGGCTTTCGCCGATGAGATCACTCCTGTGACCGTTACTTCCCGCAAGGGCGATAAGGTCATCGACACCGACGAGGGCTACCTTGACATCAAGTTTGAGAAGGTTCCCACGCTTAAGCCCGCATTCGTCCGTGACGGCACGGGCACCGTCACTGCCGCCAACTCCTCTACCCTCAACGATGGCGCCAGTGCTCTCGTCCTCGCCAACCGTGCCGTTGCAGAGGAGTACGGTTCGCAGTCACGCGTCCTGGCCCGTATCTGCGGCCACGCCGACGCCGCCATGGACCCGATCGACTTCCCCGTTGCCCCGGCCAAGGCTGTGCCGCTTGCCCTTGAGCGTGCAGGCATCACCAAGGACCAAGTCGCTGTCTGGGAGTTCAACGAGGCTTTTCGCCGGCGTTGTTCTCGCAAACCAAAAGATTTTGGGTATTGACGGTTCGAAGGTAAACCCTCTTGGTGGCGCTATCTCTCTGGGACACGCGCTGGGGAGCTCCGGCTCAAGAATCCTGACCACACTGCTGCACCAGCTTAAGCCAGTGAGTACGGTGTC]

[+] EMBL CA999858             [ACAACAAGTTCCACATGGGTAACTGTGCTGAGAACACCGCCAAGAAGCACAACATTACTCGTGAGCAGCAGGATGAGTATGCTATGCGCTCATACAAGAATGCTCAAGCTGCCTGGGCCAACAAGGCTTTCGCCGATGAGATCACTCCTGTGACCGTTACTTCCCGCAAGGGCGATAAGGTCATCGACACCGACGAGGGCTACCTTGACATCAAGTTTGAGAAGGTTCCCACGCTTAAGCCCGCATTCGTCCGTGACGGCACGGGCACCGTCACTGCCGCCAACTCCTCTACCCTCAACGATGGCGCCAGTGCTCTCGTCCTCGCCAACCGTGCCGTTGCAGAGGAGTACGGTTCGCAGTCACGCGTCCTGGCCCGTATCTGCGGCCACGCCGACGCCGCCATGGACCCGATCGACTTCCCCGTTGCCCCGGCCAAGGCTGTGCCGCTTGCCCTTGAGCGTGCAGGCATCACCAAGGACCAAGTCGCTGTCTGGGAGTTCAACGAGGCTTTTCGCCGGCGTTGTTCTCGCAAACCAAAAGATTTTGGGTATTGACGGTTCGAAGGTAAACCCTCTTGGTGGCGCTATCTCTCTGGGACACGCGCTGGGGAGCTCCGGCTCAAGAATCCTGACCACACTGCTGCACCAGCTTAAGCCAGTGAGTACGGTGTC]
[+] EMBL CB000854             [ACAACAAGTTCCACATGGGTAACTGTGCTGAGAACACCGCCAAGAAGCACAACATTACTCGTGAGCAGCAGGATGAGTATGCTATGCGCTCATACAAGAATGCTCAAGCTGCCTGGGCCAACAAGGCTTTCGCCGATGAGATCACTCCTGTGACCGTTACTTCCCGCAAGGGCGATAAGGTCATCGACACCGACGAGGGCTACCTTGACATCAAGTTTGAGAAGGTTCCCACGCTTAAGCCCGCATTCGTCCGTGACGGCACGGGCACCGTCACTGCCGCCAACTCCTCTACCCTCAACGATGGCGCCAGTGCTCTCGTCCTCGCCAACCGTGCCGTTGCAGAGGAGTACGGTTCGCAGTCACGCGTCCTGGCCCGTATCTGCGGCCACGCCGACGCCGCCATGGACCCGATCGACTTC                                                                                                                                                                                                                                                            ]
[+] EMBL CA999857             [ACAACAAGTTCCACATGGGTAACTGTGCTGAGAACACCGCCAAGAAGCACAACATTACTCGTGAGCAGCAGGATGAGTATGCTATGCGCTCATACAAGAATGCTCAAGCTGCCTGGGCCAACAAGGCTTTCGCCGATGAGATCACTCCTGTGACCGTTACTTCCCGCAAGGGCGATAAGGTCATCGACACCGACGAGGGCTACCTTGACATCAAGTTTGAGAAGGTTCCCACGCTTAAGCCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_5386#0
ACAACAAGTTCCACATGGGTAACTGTGCTGAGAACACCGCCAAGAAGCACAACATTACTC
GTGAGCAGCAGGATGAGTATGCTATGCGCTCATACAAGAATGCTCAAGCTGCCTGGGCCA
ACAAGGCTTTCGCCGATGAGATCACTCCTGTGACCGTTACTTCCCGCAAGGGCGATAAGG
TCATCGACACCGACGAGGGCTACCTTGACATCAAGTTTGAGAAGGTTCCCACGCTTAAGC
CCGCATTCGTCCGTGACGGCACGGGCACCGTCACTGCCGCCAACTCCTCTACCCTCAACG
ATGGCGCCAGTGCTCTCGTCCTCGCCAACCGTGCCGTTGCAGAGGAGTACGGTTCGCAGT
CACGCGTCCTGGCCCGTATCTGCGGCCACGCCGACGCCGCCATGGACCCGATCGACTTCC
CCGTTGCCCCGGCCAAGGCTGTGCCGCTTGCCCTTGAGCGTGCAGGCATCACCAAGGACC
AAGTCGCTGTCTGGGAGTTCAACGAGGCTTTTCGCCGGCGTTGTTCTCGCAAACCAAAAG
ATTTTGGGTATTGACGGTTCGAAGGTAAACCCTCTTGGTGGCGCTATCTCTCTGGGACAC
GCGCTGGGGAGCTCCGGCTCAAGAATCCTGACCACACTGCTGCACCAGCTTAAGCCAGTG
AGTACGGTGTC

clustalw multiple alignements is not computed in this case