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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5393 cluster # 5393       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5393#0 length = 1233 sequences # 3  

consensusID : consensus_5393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1233
fasta sequence
                              [AACATTGGGTATCTGTGACATATGCCAGAAATGGCGTCTCCTGCCATATAAGATGAATCCTTCTCTGCTACCAAGAAGTGGAAATGTAGCATGCTACAGTGGCTACCAGGGATGAATAGATGTGAAGTTAGTGAAGATGAGACTACCATGCTCTGAATGCACTATATGTCAGTCCAGCCCCTGGCAATGGCGTTGCTTCGGTTGGACATTCTCATGTTGCTTCTTCAGGGCTAACAACATCAAACACTTTGAATGTAAATGGACATGTTGAACAAAGTAGGAAAAGGAAGAATACTCTGAGTGACGGAAATGTTTCCTTTGATGTTTCTCAGCAAATGCAAGGTTCGGTTTATCCACTGAGCAACCAACATGCTCCTATTAGAAGTAAAAGTGCTGCTGATAGTATCCAGTTTCCTGTTGAGAGAGATTCTAAATCAGTTGACCATTTCGTTGAGAAGAAAAGGTCCAAGAGCAAGAATCATGGTAGCTCTTCTGATGGAGGCCATCTCGTGGAAAGATCCAAGAAGCATTC-AAAGTAAAAAGC-AGAGAGAGATGGATCATGATGAATACAGAACTTCTAAAAAAATTAAGAAAGAGGAGCGGCGCCAGCGCCAGTCTGGCATAGATTCTAACCCTGGATATGATTTAGCTAGTGGAGACGTTCCTGATGAGGCCAAAGCTTTGCCTTCAAAATCGATGGCCTTACAGGGTTCGAGTGAAAGGAGTGATGTTCCTCCATCAAAGTATAAAAGTGTTTCTAAGTATAATTCTTCAGAAAAATCTAAGAGATCTAAGGATGGGGATGTTTTTCTTCCTGAAGACAAGAACAAGGAACATTCTTACCCCTCTGATGCACAAAAACCAGATTTGTCTAGTAAGAAGAGGATAGTGAAGGAATGGGAGGAGAGTCAGCACAATTCAACACCTCCGGTGAGTAAAATGTCTATTGTAAACCAAAGCTCTTCTTCCAAAGAAACCTGCAAGGATCAGAACTTAAAGGAAACAAAGTCAAAGTTAACAAAGTCTGAAGAACCGTTTGCCATGACAGATTCAAAATCAATAAAAGTTGCACATTCTAATCAAACTTCACGCAATCTAAATAATGAGCTATTTGAGGACAGCACACCTTTTGCTGTTAANAGTGGTATGTCTGAACCACCTGAAAATCGATCTTCTGAACAAGCTTTGGATTTGGCTGAACCTGCCTCCAGTGATTTGGCCTACTTTCAGACT]

[+] EMBL BQ906305             [AACATTGGGTATCTGTGACATATGCCAGAAATGGCGTCTCCTGCCATATAAGATGAATCCTTCTCTGCTACCAAGAAGTGGAAATGTAGCATGCTACAGTGGCTACCAGGGATGAATAGATGTGAAGTTAGTGAAGATGAGACTACCATGCTCTGAATGCACTATATGTCAGTCCAGCCCCTGGCAATGGCGTTGCTTCGGTTGGACATTCTCATGTTGCTTCTTCAGGGCTAACAACATCAAACACTTTGAATGTAAATGGACATGTTGAACAAAGTAGGAAAAGGAAGAATACTCTGAGTGACGGAAATGTTTCCTTTGATGTTTCTCAGCAAATGCAAGGTTCGGTTTATCCACTGAGCAACCAACATGCTCCTATTAGAAGTAAAAGTGCTGCTGATAGTATCCAGTTTCCTGTTGAGAGAGATTCTAAATCAGTTGACCATTTCGTTGAGAAGAAAAGGTCCAAGAGCAAGAATCATGGTAGCTCTTCTGATGGAGGCCATCTCGTGGAAAGATCCAAGAAGCATTC AAAGTAAAAAGC AGAGAGAGATGGATCATGATGAATACAGAACTTCTAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB664644             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTAAATCAGTTGACCATTTCGTTGAGAAGAAAAGGTCCAAGAGCAAGAATCATGGTAGCTCTTCTGATGGAGGCCATCTCGTGGAAAGATCCAAGAAGCATTCAAAAGTAAAAAGCAAGAGAGAGATGGATCATGATGAATACAGAACTTCTAAGAAAATTAAGAAAGAGGAGCGGCGCCAGCGCCAGTCTGGCATAGATTCTAACCCTGGATATGATTTAGCTAGTGGAGACGTTCCTGATGAGGCCAAAGCTTTGCCTTCAAAATCGATGGCCTTACAGGGTTCGAGTGAAAGGAGTGATGTTCCTCCATCAAAGTATAAAAGTGTTTCTAAGTATAATTCTTCAGAAAAATCTAAGAGATCTAAGGATGGGGATGTTTTTCTTCCTGAAGACAAGAACAAGGAACATTCTTACCCCTCTGATGCACAAAAACCAGATTTGTCTAGTAAGAAGAGGATAGTGAAGGAATGGGAGGAGAGTCAGCACAATTCAACACCTCCGGTGAGTAAAATGTCTATTGTAAACCAAAGCTCTTCTTCCAAAGAAACCTGCAAGGATCAGAACTTAAAGGAAACAAAGTCAAAGTTAACAAAGTCTGAAGAACCGTTTGCCATGACAGATTCAAAATCAATAAAAGTTGCACATTCTAATCAAACTTCACGCAATCTAAATAATGAGCTATTTGAGGACAGCACACCTTTTGCTGTTAANAGTGGTATGTCTGAACCACCTGAAAATCGATCTTCTGAACAAGCTTTGGATTTGGCTGAACCTGCCTCCAGTGATTTGGCCTACTTTCAGACT]
[+] EMBL CB664606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGGTTCGAGTGAAAGGAGTGATGTTCCTCCATCAAAATATACAAGTGTTTCTAAGTATAATTCTTCAGAAAAATCTAGGAGATCTAAGGATGGGGATGTTTTTCTTCCTGAAGACAAGACCTAGGAACATTCTTACCCCTCTGATGCACAAGAACCAGATTTGTCTAGCTACAAGAGGATAGTGAACGACTGGGAGGACAGTCAGCACAATTCAACACCTCCTGTGAGAACAATGTCTATTGTAAACCAAAG                                                                                                                                                                                                                                                                                  ]


>consensus_5393#0 AACATTGGGTATCTGTGACATATGCCAGAAATGGCGTCTCCTGCCATATAAGATGAATCC TTCTCTGCTACCAAGAAGTGGAAATGTAGCATGCTACAGTGGCTACCAGGGATGAATAGA TGTGAAGTTAGTGAAGATGAGACTACCATGCTCTGAATGCACTATATGTCAGTCCAGCCC CTGGCAATGGCGTTGCTTCGGTTGGACATTCTCATGTTGCTTCTTCAGGGCTAACAACAT CAAACACTTTGAATGTAAATGGACATGTTGAACAAAGTAGGAAAAGGAAGAATACTCTGA GTGACGGAAATGTTTCCTTTGATGTTTCTCAGCAAATGCAAGGTTCGGTTTATCCACTGA GCAACCAACATGCTCCTATTAGAAGTAAAAGTGCTGCTGATAGTATCCAGTTTCCTGTTG AGAGAGATTCTAAATCAGTTGACCATTTCGTTGAGAAGAAAAGGTCCAAGAGCAAGAATC ATGGTAGCTCTTCTGATGGAGGCCATCTCGTGGAAAGATCCAAGAAGCATTCAAAGTAAA AAGCAGAGAGAGATGGATCATGATGAATACAGAACTTCTAAAAAAATTAAGAAAGAGGAG CGGCGCCAGCGCCAGTCTGGCATAGATTCTAACCCTGGATATGATTTAGCTAGTGGAGAC GTTCCTGATGAGGCCAAAGCTTTGCCTTCAAAATCGATGGCCTTACAGGGTTCGAGTGAA AGGAGTGATGTTCCTCCATCAAAGTATAAAAGTGTTTCTAAGTATAATTCTTCAGAAAAA TCTAAGAGATCTAAGGATGGGGATGTTTTTCTTCCTGAAGACAAGAACAAGGAACATTCT TACCCCTCTGATGCACAAAAACCAGATTTGTCTAGTAAGAAGAGGATAGTGAAGGAATGG GAGGAGAGTCAGCACAATTCAACACCTCCGGTGAGTAAAATGTCTATTGTAAACCAAAGC TCTTCTTCCAAAGAAACCTGCAAGGATCAGAACTTAAAGGAAACAAAGTCAAAGTTAACA AAGTCTGAAGAACCGTTTGCCATGACAGATTCAAAATCAATAAAAGTTGCACATTCTAAT CAAACTTCACGCAATCTAAATAATGAGCTATTTGAGGACAGCACACCTTTTGCTGTTAAN AGTGGTATGTCTGAACCACCTGAAAATCGATCTTCTGAACAAGCTTTGGATTTGGCTGAA CCTGCCTCCAGTGATTTGGCCTACTTTCAGACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)