cluster # 5399

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Oryza sativa
cluster # 5399 cluster # 5399 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5399#0 length = 679 sequences # 3

consensusID : consensus_5399#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 679
fasta sequence

                              [TAACATTTCAATTGATCGAAACAAAATAGCATGAATAAATTCATCTAATTCCACTAGAACTGGAATCAGTTTGAGCTGTAACAATCTTCAGCTCCATCAAATATAGAAGCACCAGGTGAAACAATATCAGTTGAAGTTAAATTAGTCAATTTTGTTTGGCTACAAGCCTACAACTTGGCTTATCACTTGGGACTATAGTGGTACTAGACCCTGTAATCTAACAACTTAATCAAATGTGTCATTCTCTTCACGCATGGACGTGTGCCCCCCATCTAGCCTGCAATTCCTCTATGTACACTTGCTATTCTGTCAGCAAAGCTGCACTAATCTGGAGAGCTCAATGGACTGATCCATCAGCAGCGTCCTGCACAGGAATGTTGAGATCTGGAAGAGCGAAGCCGCCTCCGATGGACTGCGTGGCTGACTGCTGATCAATCTGTTGCTTTCCTTTTAGATCCTCTGTAATCATCGGTTTGTTCCGTGAGCTCGAGATCTGTAATCTTATCTCAAGCTTGTCGTTTTCTTTTGAAAGCGCAGCGCAAGCTCTCTGCAAAGTACGCATCTCCTCACGGAGGCTGTCGTTCTCCACTGCAAGAGATCGCACCAGCTGCTGTACGTCCGGTAGCCTCATTTTCTTCCGTGGACGCTGACCGGCCGGCCGTAGAGGCGACGGCGCTGA]

[+] EMBL CB665025             [TAACATTTCAATTGATCGAAACAAAATAGCATGAATAAATTCATCTAATTCCACTAGAACTGGAATCAGTTTGAGCTGTAACAATCTTCAGCTCCATCAAATATAGAAGCACCAGGTGAAACAATATCAGTTGAAGTTAAATTAGTCAATTTTGTTTGGCTACAAGCCTACAACTTGGCTTATCACTTGGGACTATAGTGGTACTAGACCCTGTAATCTAACAACTTAATCAAATGTGTCATTCTCTTCACGCATGGACGTGTGCCCCCCATCTAGCCTGCAATTCCTCTATGTACACTTGCTATTCTGTCAGCAAAGCTGCACTAATCTGGAGAGCTCAATGGACTGATCCATCAGCAGCGTCCTGCACAGGAATGTTGAGATCTGGAAGAGCGAAGCCGCCTCCGATGGACTGCGTGGCTGACTGCTGATCAATCTGTTGCTTTCCTTTTAGATCCTCTGTAATCATCGGTTTGTTCCGTGAGCTCGAGATCTGTAATCTTATCTCAAGCTTGTCGTTTTCTTTTGAAAGCGCAGCGCAAGCTCTCTGCAAAGTACGCATCTCCTCACGGAGGCTGTCGTTCTCCACTGCAAGAGATCGCACCAGCTGCTGTACGTCCGGTAGCCTCATTTTCTTCCGTGGACGCTGACCGGCCGGCCGTAGAGGCGACGGCGCTG ]
[-] EMBL BQ906256             [         ttTTGATCGAAACAAAATAGCATGAATAAATTCATCTAATTCCACTAGAACTGGAATCAGTTTGAGCTGTAACAATCTTCAGCTCCATCAAATATAGAAGCACCAGGTGAAACAATATCAGTTGAAGTTAAATTAGTCAA TTTGTTTGGCTACAAGCCTACAACTTGGCTTATCACTTGGGACTATAGTGGTACTAGACCCTGTAATCTAACAACTTAATCAAATGTGTCATTCTCTTCACGCATGGACGTGTGCCCCCCATCTAGCCTGCAATTCCTCTATGTACACTTGCTATTCTGTCAGCAAAGCTGCACTAATCTGGAGAGCTCAANGGACTGATCCATCAGCAGCGTCCTGCACAGGAATGTTGAGATCTGGAAGAGCGAAGCTGCCTCCGATGGACTGCGTGGC                                                                                                                                                                                                                                                                  ]
[-] EMBL AK107630             [                                                                                                                               CAGTTGAAGTTAAATTAGTCAATTTTGTTTGGCTACAAGCCTACAACTTGGCTTATCACTTGGGACTATAGTGGTACTAGACCCTGTAATCTAACAACTTAATCAAATGTGTCATTCTCTTCACGCATGGACGTGTGCCCCCCATCTAGCCTGCAATTCCTCTATGTACACTTGCTATTCTGTCAGCAAAGCTGCACTAATCTGGAGAGCTCAATGGACTGATCCATCAGCAGCGTCCTGCACAGGAATGTTGAGATCTGGAAGAGCGAAGCCGCCTCCGATGGACTGCGTGGCTGACTGCTGATCAATCTGTTGCTTTCCTTTTAGATCCTCTGTAATCATCGGTTTGTTCCGTGAGCTCGAGATCTGTAATCTTATCTCAAGCTTGTCGTTTTCTTTTGAAAGCGCAGCGCAAGCTCTCTGCAAAGTACGCATCTCCTCACGGAGGCTGTCGTTCTCCACTGCAAGAGATCGCACCAGCTGCTGTACGTCCGGTAGCCCCATTTTCTTCCGTGGACGCTGACCGGCCGGCCGTAGAGGCGACGGCGCTGA]




>consensus_5399#0
TAACATTTCAATTGATCGAAACAAAATAGCATGAATAAATTCATCTAATTCCACTAGAAC
TGGAATCAGTTTGAGCTGTAACAATCTTCAGCTCCATCAAATATAGAAGCACCAGGTGAA
ACAATATCAGTTGAAGTTAAATTAGTCAATTTTGTTTGGCTACAAGCCTACAACTTGGCT
TATCACTTGGGACTATAGTGGTACTAGACCCTGTAATCTAACAACTTAATCAAATGTGTC
ATTCTCTTCACGCATGGACGTGTGCCCCCCATCTAGCCTGCAATTCCTCTATGTACACTT
GCTATTCTGTCAGCAAAGCTGCACTAATCTGGAGAGCTCAATGGACTGATCCATCAGCAG
CGTCCTGCACAGGAATGTTGAGATCTGGAAGAGCGAAGCCGCCTCCGATGGACTGCGTGG
CTGACTGCTGATCAATCTGTTGCTTTCCTTTTAGATCCTCTGTAATCATCGGTTTGTTCC
GTGAGCTCGAGATCTGTAATCTTATCTCAAGCTTGTCGTTTTCTTTTGAAAGCGCAGCGC
AAGCTCTCTGCAAAGTACGCATCTCCTCACGGAGGCTGTCGTTCTCCACTGCAAGAGATC
GCACCAGCTGCTGTACGTCCGGTAGCCTCATTTTCTTCCGTGGACGCTGACCGGCCGGCC
GTAGAGGCGACGGCGCTGA

clustalw multiple alignements is not computed in this case