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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5409#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2702 fasta sequence
[AAACCCTCGCCTCCTTCCCCCCACGCCGCGCTCCGACCTCTCGCCGCCGGCGAGCCCCCGCGTGATCTCCATCCTCCAACGCAGCGCCGCCGCCCGCCCGCGCTCCCGACCACCGCGGCCCTAACGCGCTGCGCCGGGGGAGCTTCCCGTCTCCGCGGCGCTGCTTCGCGTACGCCTCCTCCTCCTCCTCCCGCCGCCGCAATTCCGACCTCCTGATGTGCTCCGAGAAAGGCATCGGGGAGGAGCCGGCTGTTGCCCTCGCCGTCAATCTCTGATTTCCACCCAAGGAGGAGGGATCGAAGCAGGAGGCCTGAGCCCAAGAATCCAGCTGGATTAGGTTACCATTTTCATCAATCTGAGTGAGTGTTACACCGGCTTTGACACAATTAATTGCAATACTACTGTTTCTGCTGACCTGCTTTGGTCTAGTGGGAGATCAAGTGTTAATGTTTCCGATTTGTGGTATCTCCAGGACAGTGACTGAAGGTACACAAAGAGCTGAACAAAAGAGCTATTGGGTTTATTTCCCTTAACAGTTTGTTGGGAACATTTGCCAAATAGGTGGTTCAGAATTGCCTCCAAACCCATGTGTTTCACACACATCTGATCACACCCAATATACACATTCCGTACAATCTTCTCTCGTTTGCAATGGGTCCTCGCCCACCTGGTGGTTCTTCAGATAAAAAAAGTTGTCAAAATGTCACACCAGATAAAGACAGCTCTATGAATTTCTGCCACCAACAATATCCGCAGCACCTATTTTCACAACCACCATATGCAATGAATTTCCCATTCCCACCATTTCCTCACTACCCTCCATACACACAAAATTTGCAATATGCTGTTCCACCACAATATGCTCCATACACATTACCACCTCCTGCTGGAGCTATGCCATCAACATTTTTACCTGCTCCAGTTATTCCATCCAAGGCACCGTCTGACCAAGGCACCCCGCGTTCAATAACTGGTCCAGGAGAACAAGGCACTGACAATGCTGAACCTGAGAAGGCTACTAAGCGACTATATTGGACAGAAAAGGAGGACATAAGATTGATAAGCGCCTGGTTGATTTATTACAAGACTGACAGGTACTGGGAAAAGGTTGTAGCAGAATACAACAGTACAATCCCTGCAACTCGAAGAAGGGAACTTCAACATGTGAAGGGCCACTGGCACAAGATATTCAGAAAGGTGGCACACTTCCATGATTGTTGGTGCCGGGTTAAGGCAAAATATCCTAGTGGCCACTCTGAGGGCATGCAACTGATGGACAAAACTTGGCTGATGTATAATGAGGAAGCACGTGTGATGTATCTTGAAGAAGCAGAGCATAATTTCGCCTTCGACCATTGCTGGAAAGCAGTTTGGAACCAACCCAAGTGGAAAGCATACATGTCTTGTTTATTTACGAAAAGAACAATGCAGTCTGATTCTTGGGAGTACATGTCGTCTTCTGAGGACTCTGAAGAAATGCCTGGAAAAGAAATAGGTGAAGAAGTTTGCATGACATCTAAGGAAGCTAAAGTTAAGAGGTCAACTTCGTCTTCAGAGATGCAAGAAGACATGCTTATCAAGAACCCTGAGGAGCTGACAGAAGTAGAGCCTTCTATCTCCAATGAAAAGCATCTGTTGGCCAGTTTGAAACAACAAGATGCTTGCACCAAGGACACAGGAATTTCCAAGAAGCAATCAGAATTATTGACAGCTGATACTTCCTGGCCCACTGGATTTCGTCTTGTTGACACTTCAGAATTGAATGAACATCAACAGGGGTTGGCAGTAAGGGATGATATGCTTGAAAAAGAATCACGTCCACAAGGTTTCGATGCACAAGACAACGAGAGGGCGACAAGGGAAAACATTCCTAGAAAAGAAACACAGCCACGAATTTGCAAGGCACCAAAGTTCAGTCGGAAACGTAAAGGCAAGGCATCGTCTTCCTCATGCGAGGTGCAAGAAGACATCAAACATGCGATGCATCTTCAGACCATGCTTAACAATGATCGTGTGAAGATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACTACACTTTACAAGAAGTACACGGAGCTGTTGCTGGCAGACACTTCAAGGTTCGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCACTGAGGCATATAGGAGGAATGCTATTCAGCAAGGATGGCAATTAGTGCCCTTGCTTCAATTTGTCTTAAAGCGTTACTGTGCAAATGTCATCTCAAGCACTAGCTAGTCATAGATCCTTCTATTCTACCTGTTGAATGAAGGGACTAGTCATAGATCACTTGCAAGTTTAGCCTAGACTTACTGACATCCAGTTTGTGGAACTTGACTAATTGAATCCTGTAAGTGATGGATCAATATGTAGTCAGCTTTAGTTGGCTCGTCTAAGTTCTTAGGAATGTTCATTCAGCTGGCAGAAATGTCCATTTTGCTAACCTGATCTACACTAGCAAGAATGCTTGAACAGTGGTGTCTATGCAACATCGACGGCAAGAATGCTTGAACAGCTATAGTGTAGATAAGGCAACCTCTTTGTTGGTTGTCGTGAGAACATTCTGGGGTGTCAGCTGTGATCTCACATTGCATCCCATGCCAAAAACAAAATGTTCCTATTCGGACAAGAGAAAACTAATTA]
[+] EMBL AK101412 [AAACCCTCGCCTCCTTCCCCCCACGCCGCGCTCCGACCTCTCGCCGCCGGCGAGCCCCCGCGTGATCTCCATCCTCCAACGCAGCGCCGCCGCCCGCCCGCGCTCCCGACCACCGCGGCCCTAACGCGCTGCGCCGGGGGAGCTTCCCGTCTCCGCGGCGCTGCTTCGCGTACGCCTCCTCCTCCTCCTCCCGCCGCCGCAATTCCGACCTCCTGATGTGCTCCGAGAAAGGCATCGGGGAGGAGCCGGCTGTTGCCCTCGCCGTCAATCTCTGATTTCCACCCAAGGAGGAGGGATCGAAGCAGGAGGCCTGAGCCCAAGAATCCAGCTGGATTAGGTTACCATTTTCATCAATCTGAGTGAGTGTTACACCGGCTTTGACACAATTAATTGCAATACTACTGTTTCTGCTGACCTGCTTTGGTCTAGTGGGAGATCAAGTGTTAATGTTTCCGATTTGTGGTATCTCCAGGACAGTGACTGAAGGTACACAAAGAGCTGAACAAAAGAGCTATTGGGTTTATTTCCCTTAACAGTTTGTTGGGAACATTTGCCAAATAGGTGGTTCAGAATTGCCTCCAAACCCATGTGTTTCACACACATCTGATCACACCCAATATACACATTCCGTACAATCTTCTCTCGTTTGCAATGGGTCCTCGCCCACCTGGTGGTTCTTCAGATAAAAAAAGTTGTCAAAATGTCACACCAGATAAAGACAGCTCTATGAATTTCTGCCACCAACAATATCCGCAGCACCTATTTTCACAACCACCATATGCAATGAATTTCCCATTCCCACCATTTCCTCACTACCCTCCATACACACAAAATTTGCAATATGCTGTTCCACCACAATATGCTCCATACACATTACCACCTCCTGCTGGAGCTATGCCATCAACATTTTTACCTGCTCCAGTTATTCCATCCAAGGCACCGTCTGACCAAGGCACCCCGCGTTCAATAACTGGTCCAGGAGAACAAGGCACTGACAATGCTGAACCTGAGAAGGCTACTAAGCGACTATATTGGACAGAAAAGGAGGACATAAGATTGATAAGCGCCTGGTTGATTTATTACAAGACTGACAGGTACTGGGAAAAGGTTGTAGCAGAATACAACAGTACAATCCCTGCAACTCGAAGAAGGGAACTTCAACATGTGAAGGGCCACTGGCACAAGATATTCAGAAAGGTGGCACACTTCCATGATTGTTGGTGCCGGGTTAAGGCAAAATATCCTAGTGGCCACTCTGAGGGCATGCAACTGATGGACAAAACTTGGCTGATGTATAATGAGGAAGCACGTGTGATGTATCTTGAAGAAGCAGAGCATAATTTCGCCTTCGACCATTGCTGGAAAGCAGTTTGGAACCAACCCAAGTGGAAAGCATACATGTCTTGTTTATTTACGAAAAGAACAATGCAGTCTGATTCTTGGGAGTACATGTCGTCTTCTGAGGACTCTGAAGAAATGCCTGGAAAAGAAATAGGTGAAGAAGTTTGCATGACATCTAAGGAAGCTAAAGTTAAGAGGTCAACTTCGTCTTCAGAGATGCAAGAAGACATGCTTATCAAGAACCCTGAGGAGCTGACAGAAGTAGAGCCTTCTATCTCCAATGAAAAGCATCTGTTGGCCAGTTTGAAACAACAAGATGCTTGCACCAAGGACACAGGAATTTCCAAGAAGCAATCAGAATTATTGACAGCTGATACTTCCTGGCCCACTGGATTTCGTCTTGTTGACACTTCAGAATTGAATGAACATCAACAGGGGTTGGCAGTAAGGGATGATATGCTTGAAAAAGAATCACGTCCACAAGGTTTCGATGCACAAGACAACGAGAGGGCGACAAGGGAAAACATTCCTAGAAAAGAAACACAGCCACGAATTTGCAAGGCACCAAAGTTCAGTCGGAAACGTAAAGGCAAGGCATCGTCTTCCTCATGCGAGGTGCAAGAAGACATCAAACATGCGATGCATCTTCAGACCATGCTTAACAATGATCGTGTGAAGATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACTACACTTTACAAGAAGTACACGGAGCTGTTGCTGGCAGACACTTCAAGGTTCGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCACTGAGGCATATAGGAGGAATGCTATTCAGCAAGGATGGCAATTAGTGCCCTTGCTTCAATTTGTCTTAAAGCGTTACTGTGCAAATGTCATCTCAAGCACTAGCTAGTCATAGATCCTTCTATTCTACCTGTTGAATGAAGGGACTAGTCATAGATCACTTGCAAGTTTAGCCTAGACTTACTGACATCCAGTTTGTGGAACTTGACTAATTGAATCCTGTAAGTGATGGATCAATATGTAGTCAGCTTTAGTTGGCTCGTCTAAGTTCTTAGGAATGTTCATTCAGCTGGCAGAAATGTCCATTTTGCTAACCTGATCTACACTAGCAAGAATGCTTGAACAGTGGTGTCTATGCAACATCGACGGCAAGAATGCTTGAACAGCTATAGTGTAGATAAGGCAACCTCTTTGTTGGTTGTCGTGAGAACATTCTGGGGTGTCAGCTGTGATCTCACATTGCATCCCATGCCAAAAACAAAATGTTCCTATTCGGACAAGAGAAAACTAATTA]
consensusID : consensus_5409#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2253 fasta sequence
[TGAACCCCACACCCGGATTCCGCCGTCAGCCAAAACCCTCGCCGCCGCCGCCGGCTGCATGCGTGGTACCTCGGCACCGGAGAACTCCCCTGTCCTCCTGGCCGTCCGCGCGTAGCCTCCGCTCTCCGACGCAGCGCCCGCCCGCCCGCCCGCCCGCCCGAGCACCGGCGGCCCTTCGTTTCTCCGGCACCTCCGCCGCCGCGCGACGTCGGAGGGATCGCAACAGGAGGCCAGAACACAAGAATTCTGCTGGATTAGGGTTGTTGCTCTCCTCCAAGTGGCATCCAACGGAACAGTAAATGAAATTAGAGCTGAACAAGATATCTCTTGGGTGTATTCTTATTTATCTGTTGGGAACTTCAACCAAATAGGTTCTCAGAATTGGCTTCAAAGTTCAAACCCATGTGCTTTCTGCTCGTTTGACATACCCACTATATACATTTCACACCATTCCACTCATTTGCAATGGGGCCTCACCCACCTAGTAGTTATTCAGATAAAAAAACTTGCCAAAATGTCCCACCAGAAAAACCCAGCTCCACGAGTTTCTGCCATCCACAATTTCCGCAGCACTTACTTTCACATCCAGCATATGCAATGAATTTCCCTTTCCCGCCGTTTCCTCACTATCCTCCATACTCGCAAAATTTCCAATATGCTGTTCCACCACAATATGCTCCATACTCATTACCGCCACCTGATGGAGCTATGCCATCACCATATGTACCAGCTACAGTTATGCCATCCAAGGCACCCTCTGATCAAGGCACCCCACATTCAGTAACTGGTCCAGGACAACAAGATGATGACGATGCTGAACCTGAGAGGACTGCTAGGCGACTAGCATGGACAGAAGAGGAAGACATTAGATTGATAAGCACTTGGTTGATTAACTACAAGACTGACAAGTACTGGGATAAGGTTGCAGCAGAATACAACAGTGCAACCCCCGGAGCTCGGAGAAGGGAAGTGAAGCATTTGAAGAACCGCTGGCAGAGGATGATCAATAAGGTGGCACATTTCAATGATTGTTGGTGCCGGGTCATGGCAAAATATCCTAGTGGCCAGTCAGAGGGCATGCAACAGATGGACAAAACTTGGCTGATGTATAATAAGGAAGCACATGTGATGTATCTCGAAGAAGCGAAGCATAAGTTCACCTTTGGCCATTGCTGGAACGCTGTTTGGGACCAACCCAAGTGGAAAGAATACATCTCTTCTTTCTCCGCAAAAAGAGTGATGCGATCTGAGTCCGGTGGTTACGTGTCATCTTCGGAAGACTCTGAAGATATGCAAGAAGGAAAATGCTTAGTGGATCCTCTGGACATGCTTCCCAAGAACCATGAAGATATGACAGAAGTCCAGCCGTCTGTCTCAAATCAAAAGAAGCAATTAGAACTATTGACAGCTGATGCGTCGTGGCCTATTGAATTTCAGCTTGGGAGGCACCAATTGATGACTGGAACATCAAAATTGAACGAACATCAGCAGGGGGTGGCAGTGAGGGATGAAATGCTTGAAAAAGAATCGGGCCCACAAGATTTTGAGGTGCTAGACAATGAGAGAGTGGCAAGGGAAGATGAACCTAAAAAAGAAACACAGCCTCATCAAGGTTTCAAGGCGCGAAAGGTCAATCGGAAACGTAAAGGCAAGGCATCATCTTCTTCATGTGAGGTGCAGGAAGACATCAAACATGCATTATATCTTCAGACCATGCTTAACAATGATCGTGAGAAAATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGATGAAGCGAATGTAAAGAAAGAAACAGCACTTTACATGAAATACACAGAGCTGTTGCTGGCAGACACTTCAAGGTTTGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCATTGAAGCATATAGGAGGGATACTATTTAGCAAGGATGTCAATTAGTGCCCTCGCAACAATTTATCTTAAGCATGCATTTCTGTGCAAATATCATCCCAACAACTAGTAATAGATCGTTTTGTTCTACTTAACTGAAGGATTGCCTCCACTAACACCTGTGTCTGTGTTAGGTTTAATCATCTCTAGCAAGATTTAACAGAGATTAGTACTGATTGAATCGTGGAAGTGATGGATCAATATGTATTTAGCTATTAGTGGCTTATCTAATTTGCAACTGACCTGTGCAAAGAATGAACTAGTGGCTTGTCTTGGAGTGATGGTTGAAGGCAAATTGCAAATACTTGA]
[+] EMBL AK101117 [TGAACCCCACACCCGGATTCCGCCGTCAGCCAAAACCCTCGCCGCCGCCGCCGGCTGCATGCGTGGTACCTCGGCACCGGAGAACTCCCCTGTCCTCCTGGCCGTCCGCGCGTAGCCTCCGCTCTCCGACGCAGCGCCCGCCCGCCCGCCCGCCCGCCCGAGCACCGGCGGCCCTTCGTTTCTCCGGCACCTCCGCCGCCGCGCGACGTCGGAGGGATCGCAACAGGAGGCCAGAACACAAGAATTCTGCTGGATTAGGGTTGTTGCTCTCCTCCAAGTGGCATCCAACGGAACAGTAAATGAAATTAGAGCTGAACAAGATATCTCTTGGGTGTATTCTTATTTATCTGTTGGGAACTTCAACCAAATAGGTTCTCAGAATTGGCTTCAAAGTTCAAACCCATGTGCTTTCTGCTCGTTTGACATACCCACTATATACATTTCACACCATTCCACTCATTTGCAATGGGGCCTCACCCACCTAGTAGTTATTCAGATAAAAAAACTTGCCAAAATGTCCCACCAGAAAAACCCAGCTCCACGAGTTTCTGCCATCCACAATTTCCGCAGCACTTACTTTCACATCCAGCATATGCAATGAATTTCCCTTTCCCGCCGTTTCCTCACTATCCTCCATACTCGCAAAATTTCCAATATGCTGTTCCACCACAATATGCTCCATACTCATTACCGCCACCTGATGGAGCTATGCCATCACCATATGTACCAGCTACAGTTATGCCATCCAAGGCACCCTCTGATCAAGGCACCCCACATTCAGTAACTGGTCCAGGACAACAAGATGATGACGATGCTGAACCTGAGAGGACTGCTAGGCGACTAGCATGGACAGAAGAGGAAGACATTAGATTGATAAGCACTTGGTTGATTAACTACAAGACTGACAAGTACTGGGATAAGGTTGCAGCAGAATACAACAGTGCAACCCCCGGAGCTCGGAGAAGGGAAGTGAAGCATTTGAAGAACCGCTGGCAGAGGATGATCAATAAGGTGGCACATTTCAATGATTGTTGGTGCCGGGTCATGGCAAAATATCCTAGTGGCCAGTCAGAGGGCATGCAACAGATGGACAAAACTTGGCTGATGTATAATAAGGAAGCACATGTGATGTATCTCGAAGAAGCGAAGCATAAGTTCACCTTTGGCCATTGCTGGAACGCTGTTTGGGACCAACCCAAGTGGAAAGAATACATCTCTTCTTTCTCCGCAAAAAGAGTGATGCGATCTGAGTCCGGTGGTTACGTGTCATCTTCGGAAGACTCTGAAGATATGCAAGAAGGAAAATGCTTAGTGGATCCTCTGGACATGCTTCCCAAGAACCATGAAGATATGACAGAAGTCCAGCCGTCTGTCTCAAATCAAAAGAAGCAATTAGAACTATTGACAGCTGATGCGTCGTGGCCTATTGAATTTCAGCTTGGGAGGCACCAATTGATGACTGGAACATCAAAATTGAACGAACATCAGCAGGGGGTGGCAGTGAGGGATGAAATGCTTGAAAAAGAATCGGGCCCACAAGATTTTGAGGTGCTAGACAATGAGAGAGTGGCAAGGGAAGATGAACCTAAAAAAGAAACACAGCCTCATCAAGGTTTCAAGGCGCGAAAGGTCAATCGGAAACGTAAAGGCAAGGCATCATCTTCTTCATGTGAGGTGCAGGAAGACATCAAACATGCATTATATCTTCAGACCATGCTTAACAATGATCGTGAGAAAATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGATGAAGCGAATGTAAAGAAAGAAACAGCACTTTACATGAAATACACAGAGCTGTTGCTGGCAGACACTTCAAGGTTTGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCATTGAAGCATATAGGAGGGATACTATTTAGCAAGGATGTCAATTAGTGCCCTCGCAACAATTTATCTTAAGCATGCATTTCTGTGCAAATATCATCCCAACAACTAGTAATAGATCGTTTTGTTCTACTTAACTGAAGGATTGCCTCCACTAACACCTGTGTCTGTGTTAGGTTTAATCATCTCTAGCAAGATTTAACAGAGATTAGTACTGATTGAATCGTGGAAGTGATGGATCAATATGTATTTAGCTATTAGTGGCTTATCTAATTTGCAACTGACCTGTGCAAAGAATGAACTAGTGGCTTGTCTTGGAGTGATGGTTGAAGGCAAATTGCAAATACTTGA]
[+] EMBL CB000531 [ TTGAGGTGCTAGACAATGAGAGAGTGGCAAGGGAAGATGAACCTAAAAAAGAAACACAGCCTCATCAAGGTTTCAAGGCGCGAAAGGTCAATCGGAAACGTAAAGGCAAGGCATCATCTTCTTCATGTGAGGTGCAGGAAGACATCAAACATGCATTATATCTTCAGACCATGCTTAACAATGATCGTGAGAAAATGTCAGAGGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGATGAAGCGAATGTAAAGAAAGAAACAGCACTTTACATGAAATACACAGAGCTGTTGCTGGCAGACACTTCAAGGTTTGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCATTGAAGCATATAGGAGGGATACTATTTAGCAAGGATGTCAATTAGTGCCCTCGCAACAATTTATCTTAAGCATGCATTTCTGTGCAAATATCATCCCAACAACTAGTAATAGATCGTTTTGTTCTACTTAACTGAAGGATTGCCTCCACTAACAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5409#0 AAACCCTCGCCTCCTTCCCCCCACGCCGCGCTCCGACCTCTCGCCGCCGGCGAGCCCCCG 60
consensus_5409#1 ------------------------------------------------------------
consensus_5409#0 CGTGATCTCCATCCTCCAACGCAGCGCCGCCGCCCGCCCGCGCTCCCGACCACCGCGGCC 120
consensus_5409#1 ------------------------------------------------------------
consensus_5409#0 CTAACGCGCTGCGCCGGGGGAGCTTCCCGTCTCCGCGGCGCTGCTTCGCGTACGCCTCCT 180
consensus_5409#1 -----------------------------------------TGAACCCCACACCCGGATT 19
** * * ** * *
consensus_5409#0 CCTCCTCCTCCCGCCGCCGCAATTCCGACCTCCTGATGTGCTCCGAGAAAGGCATCGG-G 239
consensus_5409#1 CCGCCGTCAGCCAAAACCCTCGCCGCCGCCGCCGGCTGCATGCGTGGTACCTCGGCACCG 79
** ** * ** ** * ** ** * ** * * * * * *
consensus_5409#0 GAGGAGCCGGCTGTTGCCCTCGCCGTCAATCTCTGATTTCCACCCAAGGAGGAGGGATCG 299
consensus_5409#1 GAGAACTCCCCTGTCCTCCTGGCCGTCCGCGCGTAGCCTCCGCTCTCCGACGCAGCGCCC 139
*** * * **** *** ****** * *** * * ** * * *
consensus_5409#0 AAGCAGGAGGCC-TGAGCCCAAGAATCCAGCTGGATTAGGTTACCATTTTCATCAATCTG 358
consensus_5409#1 GCCCGCCCGCCCGCCCGCCCGAGCA-CCGGCGGCCCTTCGTT-TCTCCGGCACC--TCCG 195
* * ** **** ** * ** ** * * *** * ** * ** *
consensus_5409#0 AGTGAGTGTTACACCGGCTTTGACACAATTAATTGCAATACTACTGTTTCTGCTGACCTG 418
consensus_5409#1 CCGCCGCGCGACGTCGGAGGGATCGCAACAGGAGGCCAGAACACAA--------GAATTC 247
* * ** *** * *** ** * * ** ** *
consensus_5409#0 CTTTGGTCTAGTGGGAGATCAAGTGTTAATGTTTCCGATTTGTGGTATCTC-CAGGACAG 477
consensus_5409#1 TGCTGGATTAGGGT---------TGTTGCTCTCCTCCAA--GTGGCATCCAACGGAACAG 296
*** *** * **** * * * * **** *** * * ****
consensus_5409#0 TGACTGAAGGTACACAAAGAGCTGAACAAAAGAGCTATTGGGTTTATTTCCCTTAACAGT 537
consensus_5409#1 TAAATGAAATTA------GAGCTGAACAAGATATCTCTTGGGTGTATT---CTTATTTAT 347
* * **** ** *********** * * ** ****** **** **** *
consensus_5409#0 TTGTTGGGAACATTTGCCAAATAGGTGGTTCAGAATTGCCTCCAAA-------CCCATGT 590
consensus_5409#1 CTGTTGGGAACTTCAACCAAATAGGTT-CTCAGAATTGGCTTCAAAGTTCAAACCCATGT 406
********** * ********** ********* ** **** *******
consensus_5409#0 GTTTCACACACATCTGATCACACCCAATATACACATTCCGTACAATCTTCTCTCGTTTGC 650
consensus_5409#1 GCTTTCTGCTCGTTTGA-CATACCCACTATATACATTTCACACCAT-TCCACTCATTTGC 464
* ** * * * *** ** ***** **** ***** * ** ** * * *** *****
consensus_5409#0 AATGGGTCCTCGCCCACCTGGTGGTTCTTCAGATAAAAAAAGTTGTCAAAATGTCACACC 710
consensus_5409#1 AATGGGGCCTCACCCACCTAGTAGTTATTCAGATAAAAAAACTTGCCAAAATGTCCCACC 524
****** **** ******* ** *** ************** *** ********* ****
consensus_5409#0 AGATAAAGACAGCTCTATGAATTTCTGCCACCAACAATATCCGCAGCACCTATTTTCACA 770
consensus_5409#1 AGAAAAACCCAGCTCCACGAGTTTCTGCCATCCACAATTTCCGCAGCACTTACTTTCACA 584
*** *** ****** * ** ********* * ***** ********** ** *******
consensus_5409#0 ACCACCATATGCAATGAATTTCCCATTCCCACCATTTCCTCACTACCCTCCATACACACA 830
consensus_5409#1 TCCAGCATATGCAATGAATTTCCCTTTCCCGCCGTTTCCTCACTATCCTCCATACTCGCA 644
*** ******************* ***** ** *********** ********* * **
consensus_5409#0 AAATTTGCAATATGCTGTTCCACCACAATATGCTCCATACACATTACCACCTCCTGCTGG 890
consensus_5409#1 AAATTTCCAATATGCTGTTCCACCACAATATGCTCCATACTCATTACCGCCACCTGATGG 704
****** ********************************* ******* ** **** ***
consensus_5409#0 AGCTATGCCATCAACATTTTTACCTGCTCCAGTTATTCCATCCAAGGCACCGTCTGACCA 950
consensus_5409#1 AGCTATGCCATCACCATATGTACCAGCTACAGTTATGCCATCCAAGGCACCCTCTGATCA 764
************* *** * **** *** ******* ************** ***** **
consensus_5409#0 AGGCACCCCGCGTTCAATAACTGGTCCAGGAGAACAAGGCACTGACAATGCTGAACCTGA 1010
consensus_5409#1 AGGCACCCCACATTCAGTAACTGGTCCAGGACAACAAGATGATGACGATGCTGAACCTGA 824
********* * **** ************** ****** **** *************
consensus_5409#0 GAAGGCTACTAAGCGACTATATTGGACAGAAAAGGAGGACATAAGATTGATAAGCGCCTG 1070
consensus_5409#1 GAGGACTGCTAGGCGACTAGCATGGACAGAAGAGGAAGACATTAGATTGATAAGCACTTG 884
** * ** *** ******* ********* **** ***** ************ * **
consensus_5409#0 GTTGATTTATTACAAGACTGACAGGTACTGGGAAAAGGTTGTAGCAGAATACAACAGTAC 1130
consensus_5409#1 GTTGATTAACTACAAGACTGACAAGTACTGGGATAAGGTTGCAGCAGAATACAACAGTGC 944
******* * ************* ********* ******* **************** *
consensus_5409#0 AATCCCTGCAACTCGAAGAAGGGAACTTCAACATGTGAAGGGCCACTGGCACAAGATATT 1190
consensus_5409#1 AACCCCCGGAGCTCGGAGAAGGGAAGTGAAGCATTTGAAGAACCGCTGGCAGAGGATGAT 1004
** *** * * **** ********* * * *** ***** ** ****** * *** *
consensus_5409#0 CAGAAAGGTGGCACACTTCCATGATTGTTGGTGCCGGGTTAAGGCAAAATATCCTAGTGG 1250
consensus_5409#1 CAATAAGGTGGCACATTTCAATGATTGTTGGTGCCGGGTCATGGCAAAATATCCTAGTGG 1064
** *********** *** ******************* * ******************
consensus_5409#0 CCACTCTGAGGGCATGCAACTGATGGACAAAACTTGGCTGATGTATAATGAGGAAGCACG 1310
consensus_5409#1 CCAGTCAGAGGGCATGCAACAGATGGACAAAACTTGGCTGATGTATAATAAGGAAGCACA 1124
*** ** ************* **************************** *********
consensus_5409#0 TGTGATGTATCTTGAAGAAGCAGAGCATAATTTCGCCTTCGACCATTGCTGGAAAGCAGT 1370
consensus_5409#1 TGTGATGTATCTCGAAGAAGCGAAGCATAAGTTCACCTTTGGCCATTGCTGGAACGCTGT 1184
************ ******** ******* *** **** * ************ ** **
consensus_5409#0 TTGGAACCAACCCAAGTGGAAAGCATACATGTCTTGTTTATTTACGAAAAGAACAATGCA 1430
consensus_5409#1 TTGGGACCAACCCAAGTGGAAAGAATACATCTCTTCTTTCTCCGCAAAAAGAGTGATGCG 1244
**** ****************** ****** **** *** * * ****** ****
consensus_5409#0 GTCTGATTCTTGGGAGTACATGTCGTCTTCTGAGGACTCTGAAGAAATGCCTGGAAAAGA 1490
consensus_5409#1 ATCTGAGTCCGGTGGTTACGTGTCATCTTCGGAAGACTCTGAAGATATGC---------- 1294
***** ** * * *** **** ***** ** *********** ****
consensus_5409#0 AATAGGTGAAGAAGTTTGCATGACATCTAAGGAAGCTAAAGTTAAGAGGTCAACTTCGTC 1550
consensus_5409#1 ----------------------------AAGAAGGAAAATGCTTAGTGG--------ATC 1318
*** * * ** * * ** ** **
consensus_5409#0 TTCAGAGATGCAAGAAGACATGCTTATCAAGAACCCTGAGGAGCTGACAGAAGTAGAGCC 1610
consensus_5409#1 CTCTG-----------GACATGCTTCCCAAGAACCATGAAGATATGACAGAAGTCCAGCC 1367
** * ********* ******** *** ** ********** ****
consensus_5409#0 TTCTATCTCCAATGAAAAGCATCTGTTGGCCAGTTTGAAACAACAAGATGCTTGCACCAA 1670
consensus_5409#1 GTCTGTCTCAAATCAAAAGAAGCAATTAG--AACTATTGACAGCTGA-----TGCGTCGT 1420
*** **** *** ***** * * ** * * * *** * *** *
consensus_5409#0 GGACACAGGAATTTCCAAGAAGCAATCAGAATTATTGACAGCTGATACTTCCTGGCCCAC 1730
consensus_5409#1 GGCCTATTGAATTTC-----AGC-----------TTGGGAGGCACCAATTGATG----AC 1460
** * ******* *** *** ** * ** ** **
consensus_5409#0 TGGATTTCGTCTTGTTGACACTTCAGAATTGAATGAACATCAACAGGGGTTGGCAGTAAG 1790
consensus_5409#1 TGGA---------------ACATCAAAATTGAACGAACATCAGCAGGGGGTGGCAGTGAG 1505
**** ** *** ******* ******** ****** ******* **
consensus_5409#0 GGATGATATGCTTGAAAAAGAATCACGTCCACAAGGTTTCGATGCACAAGACAACGAGAG 1850
consensus_5409#1 GGATGAAATGCTTGAAAAAGAATCGGGCCCACAAGATTTTGAGGTGCTAGACAATGAGAG 1565
****** ***************** * ******* *** ** * * ****** *****
consensus_5409#0 GGCGACAAGGGAAAACATTCCTAGAAAAGAAACACAGCCACG---AATTTGCAAGGCACC 1907
consensus_5409#1 AGTGGCAAGGGAAGATGAACCTAAAAAAGAAACACAGCCTCATCAAGGTTTCAAGGCGCG 1625
* * ******** * **** *************** * * ** ****** *
consensus_5409#0 AAAGTTCAGTCGGAAACGTAAAGGCAAGGCATCGTCTTCCTCATGCGAGGTGCAAGAAGA 1967
consensus_5409#1 AAAGGTCAATCGGAAACGTAAAGGCAAGGCATCATCTTCTTCATGTGAGGTGCAGGAAGA 1685
**** *** ************************ ***** ***** ******** *****
consensus_5409#0 CATCAAACATGCGATGCATCTTCAGACCATGCTTAACAATGATCGTGTGAAGATGTCAGA 2027
consensus_5409#1 CATCAAACATGCATTATATCTTCAGACCATGCTTAACAATGATCGTGAGAAAATGTCAGA 1745
************ * ****************************** *** ********
consensus_5409#0 GGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGAAGAAGC 2087
consensus_5409#1 GGTACAGCTCCGCCTCTCGAAAGAGCAGCTTGAATTGGCCAGAATAAAGCAGGATGAAGC 1805
****************************************************** *****
consensus_5409#0 AAGGGAGAAGAAGGAAACTACACTTTACAAGAAGTACACGGAGCTGTTGCTGGCAGACAC 2147
consensus_5409#1 GAATGTAAAGAAAGAAACAGCACTTTACATGAAATACACAGAGCTGTTGCTGGCAGACAC 1865
* * ***** ***** ********* *** ***** ********************
consensus_5409#0 TTCAAGGTTCGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCACTGAGGCATATAGGAGG 2207
consensus_5409#1 TTCAAGGTTTGATGAGTTTCAGAAGGCAGAGTATGAGAAAGCATTGAAGCATATAGGAGG 1925
********* ********************************* *** ************
consensus_5409#0 AATGCTATTCAGCAAGGATGGCAATTAGTGCCCTTGCTTCAATTTGTCTTAAA---GCGT 2264
consensus_5409#1 GATACTATTTAGCAAGGATGTCAATTAGTGCCCTCGCAACAATTTATCTTAAGCATGCAT 1985
** ***** ********** ************* ** ****** ****** ** *
consensus_5409#0 TACTGTGCAAATGTCATCTCAAGCACTAGCTAGTCATAGATCCTTCTATTCTACCTGTTG 2324
consensus_5409#1 TTCTGTGCAAATATCATCCCAA----CAACTAGTAATAGATCGTTTTGTTCTAC---TTA 2038
* ********** ***** *** * ***** ******* ** * ****** **
consensus_5409#0 AATGAAGGGACTAGTCATAGATCACTTGCAAGTTTAGCCTAGACTTACTGACATCCAG-- 2382
consensus_5409#1 ACTGAAGGATTGCCTCCACTAACACCTGT--GTCTGTGTTAGGTTTAATCATCTCTAGCA 2096
* ****** ** * *** ** ** * *** *** * * ** **
consensus_5409#0 ----TTTGTGGAACTTG--ACTAATTGAATCCTGTAAGTGATGGATCAATATGTAGTCAG 2436
consensus_5409#1 AGATTTAACAGAGATTAGTACTGATTGAATCGTGGAAGTGATGGATCAATATGTATTTAG 2156
** ** ** *** ******** ** ******************** * **
consensus_5409#0 CTTTAGTTGGCTCGTCTAAGTTCTTAGGAATGTTCATTCAGCTGGCAGAAATGTCC-ATT 2495
consensus_5409#1 CTATTAGTGGCTTATCTAATTTGCAACTGACCTGTGCAAAGAATGAACTAGTGGCTTGTC 2216
** * ***** ***** ** * * * ** * * * ** * *
consensus_5409#0 TTGCTAACCTGATCTACACTAG--CAAGAATGCTTGAACAGTGGTGTCTATGCAACATCG 2553
consensus_5409#1 TTGGAGTGATGGTTGAAGGCAAATTGCAAATACTTGA----------------------- 2253
*** ** * * * *** *****
consensus_5409#0 ACGGCAAGAATGCTTGAACAGCTATAGTGTAGATAAGGCAACCTCTTTGTTGGTTGTCGT 2613
consensus_5409#1 ------------------------------------------------------------
consensus_5409#0 GAGAACATTCTGGGGTGTCAGCTGTGATCTCACATTGCATCCCATGCCAAAAACAAAATG 2673
consensus_5409#1 ------------------------------------------------------------
consensus_5409#0 TTCCTATTCGGACAAGAGAAAACTAATTA 2702
consensus_5409#1 -----------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||