cluster # 5418

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Oryza sativa
cluster # 5418 cluster # 5418 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5418#0 length = 1846 sequences # 3
consensusID : consensus_5418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1846
fasta sequence
                              [CCGCCGCCGTTTATCGCCTCGGCGGCGCGGAATCCTCTCTCTTGGTTCGCAAATGGCAGCCGCACGGGGTAGCTTATAGGGATCTTCTTGGGAGTTACCCTGGTTGACTGGTCCGCTCATTCATCGAATCAACGCATCCTGCGCCGTCGCCTCGCCTGTTCTTCAATTTGCCGCCGGCGCCGGCTTCGGCTTGGCCATGGTGCTCCGGCCTCACGGGAGTTCTTGCTGAATGTTTATCATGGAATCAGGATAATCATCCAAGACAAGATCCCAAGAGCAAGCGGTTGTCATAGCTTTAGGGAGCAATGTAGGTCACAGAATCAGTAACTTTATACATCCCTACAGCTCATGAGAGATTCATGCATTATCATTACACCACATGCCTGCTTGTATAAAACTGCACTTGCATGTGTCACTGATGAACCATTGTTTCAAAACTCCGTTGTTAAGAGGGACAATAAAGCTTGGACCACATGAATTACTCAGGAAGCTGCTAAGATATGGGCCACATTAAACAAAGCTTGAGACAGCAAAGAAATTGAGAAGGAGTTGGGCCACTGATGGAATAAGATATAGTCCTGGCCAATTGATTTGGATATTATTTTCTATGGTAAGCACCAGATAAAGAAATGGTGAAAGAATAGTTCACTTTGTGCTCAACATCACAGTTGCATATGGTTAGCGCTAGACAAACTCTGAAGTTTTGATAGACATGAGAGGCTATTGTTATGGCTCTGGTGATGAGTCTTCCAAGTTTGAATACTGAAACTGATATTGGTGCAAGTTGGCATCCACTCTCAAAATGCAGAGATGTCTTCGAACTCTTGGAGAATCTTGGACGACAGCCCTTGATTAAAAGGCAAATACTAAGACGGGGTTGCCCATCGGTAGTGCGTTGTTTGATTGGCAAAGAGAAGTTTCATAGCCTCATGGGTATACTTAATATGAACCTGATAGTTCAAGTGATCGAGCGAAGTTTCAAGAAGTAGACGATGCTATTCTCAGGTCAAGTTGCTATTATGTGATGATGCCCCTTGCATAGTAATACATCTGAGAGAGGATCCCTCCACAATACATATTATCAAATTTTGAATTAAGGAGATGTTTGCAAGCAGGTGGCCATGGAACGATACTCAAGGGTGTAA-TGGCACAGAAATGACACACCTCCCTTTGTGGAGAATGATTGTTGACACCGGAATTGGTTTCTCAAAAGGTTCTGAATGTTTCTCAAAAGATGAGTAAAAGAAGCATCG-GTGCTTCACAAGTGCCAATGTTAGTTGAATGACCATCCATGAAAATATTTCTAGGTGAAATATGTGACCACACCGATCCCATCGAAAGAATTTCAGCTCATGCTGCCTCATCTGCAACATTGGTTGGTCAACATAATCAAAGTGCACAATGCCAGATTTGGTGTTGGTTCTGCAAAAATATGTGACACGTTGCTAAAGCA-GAGTAAAACTTTGGACTTTCTAATAACAAGATTAAGCATAAGATCTTTTGAATTTTTCATGAAATCCATGAATATAATCCAAATCGATTCAAGTGTAGGAGTTCATGTCACTAAGAGACTAAATAAAAATGAGGTGATCTTGAGCTATCCTCTGCANTCGAGCTTTACCCTGCTATTTTGATTGGCATTCTTCTAAATCGAANTCAATGTGCTGCCTACCTGCTCAACATATAAACATATTGCANCAACCAAATTAAATACATGCGTTTGTATTTCTTTNAGCTTTNTCTACAGATCCATTATTGTACTCTCTTATGNTAGCANTCCCTTGGGGTCCTTAAAANTNGCCTCTGGTTTGAGTGAACCTTTTGGCCTTAAAATCTCACCAAAANA]

[+] EMBL AK073991             [CCGCCGCCGTTTATCGCCTCGGCGGCGCGGAATCCTCTCTCTTGGTTCGCAAATGGCAGCCGCACGGGGTAGCTTATAGGGATCTTCTTGGGAGTTACCCTGGTTGACTGGTCCGCTCATTCATCGAATCAACGCATCCTGCGCCGTCGCCTCGCCTGTTCTTCAATTTGCCGCCGGCGCCGGCTTCGGCTTGGCCATGGTGCTCCGGCCTCACGGGAGTTCTTGCTGAATGTTTATCATGGAATCAGGATAATCATCCAAGACAAGATCCCAAGAGCAAGCGGTTGTCATAGCTTTAGGGAGCAATGTAGGTCACAGAATCAGTAACTTTATACATCCCTACAGCTCATGAGAGATTCATGCATTATCATTACACCACATGCCTGCTTGTATAAAACTGCACTTGCATGTGTCACTGATGAACCATTGTTTCAAAACTCCGTTGTTAAGAGGGACAATAAAGCTTGGACCACATGAATTACTCAGGAAGCTGCTAAGATATGGGCCACATTAAACAAAGCTTGAGACAGCAAAGAAATTGAGAAGGAGTTGGGCCACTGATGGAATAAGATATAGTCCTGGCCAATTGATTTGGATATTATTTTCTATGGTAAGCACCAGATAAAGAAATGGTGAAAGAATAGTTCACTTTGTGCTCAACATCACAGTTGCATATGGTTAGCGCTAGACAAACTCTGAAGTTTTGATAGACATGAGAGGCTATTGTTATGGCTCTGGTGATGAGTCTTCCAAGTTTGAATACTGAAACTGATATTGGTGCAAGTTGGCATCCACTCTCAAAATGCAGAGATGTCTTCGAACTCTTGGAGAATCTTGGACGACAGCCCTTGATTAAAAGGCAAATACTAAGACGGGGTTGCCCATCGGTAGTGCGTTGTTTGATTGGCAAAGAGAAGTTTCATAGCCTCATGGGTATACTTAATATGAACCTGATAGTTCAAGTGATCGAGCGAAGTTTCAAGAAGTAGACGATGCTATTCTCAGGTCAAGTTGCTATTATGTGATGATGCCCCTTGCATAGTAATACATCTGAGAGAGGATCCCTCCACAATACATATTATCAAATTTTGAATTAAGGAGATGTTTGCAAGCAGGTGGCCATGGAACGATACTCAAGGGTGTAA TGGCACAGAAATGACACACCTCCCTTTGTGGAGAATGATTGTTGACACCGGAATTGGTTTCTCAAAAGGTTCTGAATGTTTCTCAAAAGATGAGTAAAAGAAGCATCG GTGCTTCACAAGTGCCAATGTTAGTTGAATGACCATCCATGAAAATATTTCTAGGTGAAATATGTGACCACACCGATCCCATCGAAAGAATTTCAGCTCATGCTGCCTCATCTGCAACATTGGTTGGTCAACATAATCAAAGTGCACAATGCCAGATTTGGTGTTGGTTCTGCAAAAATATGTGACACGTTGCTAAAGCA GAGTAAAACTTTGGACTTTCTAATAACAAGATTAAGCATAAGAT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB097205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cgagaCAAGGGGGCAACTGGCACAGAAATGACACACCTCCCTTTGTGGAGAATGATTGCTGACACCGGAATTGGTTNCTCAAAAGGTTCTGAATGTTTCTCAAAAGATGAGTAAAAGAAGCATCGACTGCTTCACANGTGCCAATGTTAGTTGAATGACCATCCATGAAANTATTTCTAGGTGAAATATGTGACCACACCAATCCTATCGAAAGAATTTCGGCTCATGCTGCCTCATCTGCAACATTGGTTGGTCAACATAATCAAAGTGCACAANGCCAGATTTGGTGTTGGTTCTGCAAAAATATGNGACACGNTGCTAAAGCATGAGTAAAACTTTGGACTTTCTAATAACAAGATTAAGCATAAGATCTTTTGAATTTTTCATGAAATCCATGAATATAATCCAAATCGATTCAAGTGTAGGAGTTCATGTCACTAAGAGACTAAATAAAAATGAGGTGATCTTGAGCTATCCTCTGCANTCGAGCTTTACCCTGCTATTTTGATTGGCATTCTTCTAAATCGAANTCAATGTGCTGCCTACCTGCTCAACATATAAACATATTGCANCAACCAAATTAAATACATGCGTTTGTATTTCTTTNAGCTTTNTCTACAGATCCATTATTGTACTCTCTTATGNTAGCANTCCCTTGGGGTCCTTAAAANTNGCCTCTGGTTTGAGTGAACCTTTTGGCCTTAAAATCTCACCAAAANA]
[+] EMBL CB000868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AA TGGCACAGAAATGACACACCTCCCTTTGTGGAGAATGATTGTTGACACCGGAATTGGTTTCTCAAAAGGTTCTGAATGTTTCTCAAAAGATGAGTAAAAGAAGCATCG GTGCTTCACAAGTGCCAATGTTAGTTGAATGACCATCCATGAAAATATTTCTAGGTGAAATATGTGACCACACCGATCCCATCGAAAGAATTTCAGCTCATGCTGCCTCATCTGCAACATTGGTTGGTCAACATAATCAAAGTGCACAATGCCAGATTTGGTGTTGGTTCTGCAAAAATATGT                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_5418#0
CCGCCGCCGTTTATCGCCTCGGCGGCGCGGAATCCTCTCTCTTGGTTCGCAAATGGCAGC
CGCACGGGGTAGCTTATAGGGATCTTCTTGGGAGTTACCCTGGTTGACTGGTCCGCTCAT
TCATCGAATCAACGCATCCTGCGCCGTCGCCTCGCCTGTTCTTCAATTTGCCGCCGGCGC
CGGCTTCGGCTTGGCCATGGTGCTCCGGCCTCACGGGAGTTCTTGCTGAATGTTTATCAT
GGAATCAGGATAATCATCCAAGACAAGATCCCAAGAGCAAGCGGTTGTCATAGCTTTAGG
GAGCAATGTAGGTCACAGAATCAGTAACTTTATACATCCCTACAGCTCATGAGAGATTCA
TGCATTATCATTACACCACATGCCTGCTTGTATAAAACTGCACTTGCATGTGTCACTGAT
GAACCATTGTTTCAAAACTCCGTTGTTAAGAGGGACAATAAAGCTTGGACCACATGAATT
ACTCAGGAAGCTGCTAAGATATGGGCCACATTAAACAAAGCTTGAGACAGCAAAGAAATT
GAGAAGGAGTTGGGCCACTGATGGAATAAGATATAGTCCTGGCCAATTGATTTGGATATT
ATTTTCTATGGTAAGCACCAGATAAAGAAATGGTGAAAGAATAGTTCACTTTGTGCTCAA
CATCACAGTTGCATATGGTTAGCGCTAGACAAACTCTGAAGTTTTGATAGACATGAGAGG
CTATTGTTATGGCTCTGGTGATGAGTCTTCCAAGTTTGAATACTGAAACTGATATTGGTG
CAAGTTGGCATCCACTCTCAAAATGCAGAGATGTCTTCGAACTCTTGGAGAATCTTGGAC
GACAGCCCTTGATTAAAAGGCAAATACTAAGACGGGGTTGCCCATCGGTAGTGCGTTGTT
TGATTGGCAAAGAGAAGTTTCATAGCCTCATGGGTATACTTAATATGAACCTGATAGTTC
AAGTGATCGAGCGAAGTTTCAAGAAGTAGACGATGCTATTCTCAGGTCAAGTTGCTATTA
TGTGATGATGCCCCTTGCATAGTAATACATCTGAGAGAGGATCCCTCCACAATACATATT
ATCAAATTTTGAATTAAGGAGATGTTTGCAAGCAGGTGGCCATGGAACGATACTCAAGGG
TGTAATGGCACAGAAATGACACACCTCCCTTTGTGGAGAATGATTGTTGACACCGGAATT
GGTTTCTCAAAAGGTTCTGAATGTTTCTCAAAAGATGAGTAAAAGAAGCATCGGTGCTTC
ACAAGTGCCAATGTTAGTTGAATGACCATCCATGAAAATATTTCTAGGTGAAATATGTGA
CCACACCGATCCCATCGAAAGAATTTCAGCTCATGCTGCCTCATCTGCAACATTGGTTGG
TCAACATAATCAAAGTGCACAATGCCAGATTTGGTGTTGGTTCTGCAAAAATATGTGACA
CGTTGCTAAAGCAGAGTAAAACTTTGGACTTTCTAATAACAAGATTAAGCATAAGATCTT
TTGAATTTTTCATGAAATCCATGAATATAATCCAAATCGATTCAAGTGTAGGAGTTCATG
TCACTAAGAGACTAAATAAAAATGAGGTGATCTTGAGCTATCCTCTGCANTCGAGCTTTA
CCCTGCTATTTTGATTGGCATTCTTCTAAATCGAANTCAATGTGCTGCCTACCTGCTCAA
CATATAAACATATTGCANCAACCAAATTAAATACATGCGTTTGTATTTCTTTNAGCTTTN
TCTACAGATCCATTATTGTACTCTCTTATGNTAGCANTCCCTTGGGGTCCTTAAAANTNG
CCTCTGGTTTGAGTGAACCTTTTGGCCTTAAAATCTCACCAAAANA
clustalw multiple alignements is not computed in this case