Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5425 cluster # 5425       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5425#0 length = 761 sequences # 3  

consensusID : consensus_5425#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 761
fasta sequence
                              [TTCTCCGCTCCCTCGCAACCCGATGGCGGCGGCGGCCCCGCTCCGGTGTCCCCGGAGTCGATGAAGCACCAGGAGATCGAGGGGCCCACGGTGGAGCGCGACACCTCGCCGCTCGCGGACGAGACGCGGAGGGAGCTCGACGCGCTCCGCGCCGCCGTGCAGCGGATC-AGCGGCTCCCTCGCGCTCCTCGGCGGGGCGCACCTCGCCGCGGGCGCGTGGATCGCATCGGGCGCGGCGCCCGT-CGGCGTGGGGTCGGCCGCGGCCGTGCAGGGGGTGGTGGCGTTCGCGTTCCCCTTCACGGCCGCCCTGGTGCTGCGCCGCGCCATCAAGCCCATCGCCTTCTTCCAGAAGATGGAGGCCAACGGGCGGCTGCAGGTGCTCACGCTGTGCCTCCAGGCCACGAAGAATGTGAACCTCATGCTGCTCCGAACGCGGGTGGTCGCCATCTCGTGCGCTCTCGGGGTGTCTGTCGGGTCAGTAGCTACGATCTTGATGCGGTGAAACTCTCTAGGAAGGATGGTTAGTTTCATTGTTCGGATAATAAAAGTGCACTGGTGGTAGGCATGAGAGTCTGAACTATGAAATTTGGGTGCTTTTGGATGTCGATCATTGCTAGAGTAATTTTTTTTTGTGTATGCTTACACTATCAAGGAAATCGTAATGTTACTGTCTCGACTTTTACCTGCAAATGTAGAGATTACTCTTCCTATGACCACTATGTTAATGGAAGTCAAAGCAATGTTACAAAATAAAAAAAAAAA]

[+] EMBL AK069099             [TTCTCCGCTCCCTCGCAACCCGATGGCGGCGGCGGCCCCGCTCCGGTGTCCCCGGAGTCGATGAAGCACCAGGAGATCGAGGGGCCCACGGTGGAGCGCGACACCTCGCCGCTCGCGGACGAGACGCGGAGGGAGCTCGACGCGCTCCGCGCCGCCGTGCAGCGGATC AGCGGCTCCCTCGCGCTCCTCGGCGGGGCGCACCTCGCCGCGGGCGCGTGGATCGCATCGGGCGCGGCGCCCGT CGGCGTGGGGTCGGCCGCGGCCGTGCAGGGGGTGGTGGCGTTCGCGTTCCCCTTCACGGCCGCCCTGGTGCTGCGCCGCGCCATCAAGCCCATCGCCTTCTTCCAGAAGATGGAGGCCAACGGGCGGCTGCAGGTGCTCACGCTGTGCCTCCAGGCCACGAAGAATGTGAACCTCATGCTGCTCCGAACGCGGGTGGTCGCCATCTCGTGCGCTCTCGGGGTGTCTGTCGGGTCAGTAGCTACGATCTTGATGCGGTGAAACTCTCTAGGAAGGATGGTTAGTTTCATTGTTCGGATAATAAAAGTGCACTGGTGGTAGGCATGAGAGTCTGAACTATGAAATTTGGGTGCTTTTGGATGTCGATCATTGCTAGAGTAATTTTTTTTTGTGTATGCTTACACTATCAAGGAAATCGTAATGTTACTGTCTCGACTTTTACCTGCAAATGTAGAGATTACTCTTCCTATGACCACTATGTTAATGGAAGTCA                            ]
[+] EMBL AU174188             [TTCTCCGCTCCCTCGCAACCCGATGGCGGCGGCGGCCCCGCTCCGGTGTCCCCGGAGTCGATGAAGCACCAGGAGATCGAGGGGCCCACGGTGGAGCGCGACACCTCGCCGCTCGCGGACGAGACGCGGAGGGAGCTCGACGCGCTCCGCGCCGCCGTGCAGCGGATCAAGCGGCTCCCTCGCGCTCCTCGGCGGGGCGCACCTCGCCGCGGGCGCGTGGATCGCATCGGGCGCGGCGCCCGTCCGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU174189             [                                                                                                                                                                                                                                                                                                                                       TCAAGCCCATCGCCTTNTTCCAGAAGATGGAGGCCAACGGGCGGCTGCAGGTGCTCACGCTGTGCCTCCAGGCCACGAAGAATGTGAACCTCATGCTGCTCCGAACGCGGGTGGTCGCCATCTCGTGCGCTCTCGGGGTGTCTGTCGGGTCAGTAGCTACGATCTTGATGCGGTGAAACTCTCTAGGAAGGATGGTTAGTTTCATTGTTCGGATAATAAAAGTGCACTGGTGGTAGGCATGAGAGTNTGAACTATGAAATTTGGGTGCTTTTGGATGTCGATCATTGCTAGAGTAATTTTTTTTTGTGTATGCTTACACTATCAAGGAAATCGTAATGTTACTGTCTCGACTTTTACCTGCAAATGTAGAGATTACTCTTCCTATGACCACTATGTTAATGGAAGTCAAAGCAATGTTACAAAATAAAAAAAAAAA]


>consensus_5425#0 TTCTCCGCTCCCTCGCAACCCGATGGCGGCGGCGGCCCCGCTCCGGTGTCCCCGGAGTCG ATGAAGCACCAGGAGATCGAGGGGCCCACGGTGGAGCGCGACACCTCGCCGCTCGCGGAC GAGACGCGGAGGGAGCTCGACGCGCTCCGCGCCGCCGTGCAGCGGATCAGCGGCTCCCTC GCGCTCCTCGGCGGGGCGCACCTCGCCGCGGGCGCGTGGATCGCATCGGGCGCGGCGCCC GTCGGCGTGGGGTCGGCCGCGGCCGTGCAGGGGGTGGTGGCGTTCGCGTTCCCCTTCACG GCCGCCCTGGTGCTGCGCCGCGCCATCAAGCCCATCGCCTTCTTCCAGAAGATGGAGGCC AACGGGCGGCTGCAGGTGCTCACGCTGTGCCTCCAGGCCACGAAGAATGTGAACCTCATG CTGCTCCGAACGCGGGTGGTCGCCATCTCGTGCGCTCTCGGGGTGTCTGTCGGGTCAGTA GCTACGATCTTGATGCGGTGAAACTCTCTAGGAAGGATGGTTAGTTTCATTGTTCGGATA ATAAAAGTGCACTGGTGGTAGGCATGAGAGTCTGAACTATGAAATTTGGGTGCTTTTGGA TGTCGATCATTGCTAGAGTAATTTTTTTTTGTGTATGCTTACACTATCAAGGAAATCGTA ATGTTACTGTCTCGACTTTTACCTGCAAATGTAGAGATTACTCTTCCTATGACCACTATG TTAATGGAAGTCAAAGCAATGTTACAAAATAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)