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Oryza sativa
cluster # 5427 cluster # 5427       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5427#0 length = 1344 sequences # 3  

consensusID : consensus_5427#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1344
fasta sequence
                              [TACTCATGGGTGTCTTTCAAAAGGGAGAAGATCAGAAAGGAGAGAGTGCAAATATGAAGCCTATACCTCTTCTAAGTTCTTATGATATGGGGAAGTTCAACTTGTCACACAGGGTTGTGCTAGCACCACTAACAAGATCTAGATCATATGACAATCTCCCGCAATCACATGCCATGGAATACTACTCACAGAGGGCAACCAAAGGAGGCCTTCTAATTGCTGAAGCTACAGGTGTGTCATCTGATGCACAAGGGATGAGTGTAATCCCTCACACCCCAGGGATATGGACCAAGGAACAAGTAGAGGCATGGAAGCCTATTGTAGATGCAGTGCATGCTAAGGGTGGTATATTTTTCTGTCAAATCTGGCATGTTGGAAGAGCATCGGACATGGAGGAACGGCCCATCTCAAGCACAGATAAACCCATAGAGAAGACTGAAGAGAACTACTTCCTGGGTTTCTCCACCCCAAGGAGCTTAACTGTTGAAGAGATCCCTGATGTCATCAAGCATTTCACACTTGCTGCCAAAAATGCCTTGGAGGCTGGTTTTGATGGGGTTGAGGTTCACGCCGCAAACGGCTTCCTCCTGGACCAGTTCATGAAGGACGGCGTCAACGCCCGCGCCGACGAGTACGGCGGCGGCGTGGCGGGCCGCTGCCGCTTCGCGCTGGAGGTGGTCGACGCCGTGGCGGCGGAGGCCGGGGCCGGCCGCACCGGCGTCCGCCTCTCCCCGTACTCCCGCTGCCTCGACTGCGCCGACTCCGACCCGGACGCGCTCGCCGCCCACATGGCGCGCGAGCTGGGCTCGCGCGGCGTCCTCTACTGCAACGTGGTGGAGCCGGAGATGGTGGCGACGCCGGCGGAGGGCGGCAGCGGCGGCGAGACGATGCGGATCCCGCACCGGCTGCGCGCCGTGCGGGAGGCGTTCGCCGGCACGCTGATGGTCGGCGGCGGGTACGACAGGGAGGAGGGCAACTGGGCCGTCGCCGGCGGCTACGCCGACCTCGTCGTCTACGGCCGCCTCTTCCTGGCCAACCCGGACCTCCCCCGGAGGTTCCGGCTCGGCGCGCCGCTCAACGGGTACGACAGGGCGACGTTCTACACCGCCGACCCCGTCGCCGGCTACACCGACTACCCGTTCCTCGACGACGACGGCGACGACGGCCTCGCGGCGTCGGCGGCGTCGGCGAGCTCCAACAAGAGCGGCGATCAGGACGGCGTTTAGCTCCGAGGCAGTACACTACTGCAACTGCACCTGAATAATTCTTAGCTTTTTTGCTGCTGCTTAAGCTTTAATAATGTTGACAATCGAGAGCTCTCTTCGTTGATCCAAACCAAAAAAA]

[+] EMBL AK106409             [TACTCATGGGTGTCTTTCAAAAGGGAGAAGATCAGAAAGGAGAGAGTGCAAATATGAAGCCTATACCTCTTCTAAGTTCTTATGATATGGGGAAGTTCAACTTGTCACACAGGGTTGTGCTAGCACCACTAACAAGATCTAGATCATATGACAATCTCCCGCAATCACATGCCATGGAATACTACTCACAGAGGGCAACCAAAGGAGGCCTTCTAATTGCTGAAGCTACAGGTGTGTCATCTGATGCACAAGGGATGAGTGTAATCCCTCACACCCCAGGGATATGGACCAAGGAACAAGTAGAGGCATGGAAGCCTATTGTAGATGCAGTGCATGCTAAGGGTGGTATATTTTTCTGTCAAATCTGGCATGTTGGAAGAGCATCGGACATGGAGGAACGGCCCATCTCAAGCACAGATAAACCCATAGAGAAGACTGAAGAGAACTACTTCCTGGGTTTCTCCACCCCAAGGAGCTTAACTGTTGAAGAGATCCCTGATGTCATCAAGCATTTCACACTTGCTGCCAAAAATGCCTTGGAGGCTGGTTTTGATGGGGTTGAGGTTCACGCCGCAAACGGCTTCCTCCTGGACCAGTTCATGAAGGACGGCGTCAACGCCCGCGCCGACGAGTACGGCGGCGGCGTGGCGGGCCGCTGCCGCTTCGCGCTGGAGGTGGTCGACGCCGTGGCGGCGGAGGCCGGGGCCGGCCGCACCGGCGTCCGCCTCTCCCCGTACTCCCGCTGCCTCGACTGCGCCGACTCCGACCCGGACGCGCTCGCCGCCCACATGGCGCGCGAGCTGGGCTCGCGCGGCGTCCTCTACTGCAACGTGGTGGAGCCGGAGATGGTGGCGACGCCGGCGGAGGGCGGCAGCGGCGGCGAGACGATGCGGATCCCGCACCGGCTGCGCGCCGTGCGGGAGGCGTTCGCCGGCACGCTGATGGTCGGCGGCGGGTACGACAGGGAGGAGGGCAACTGGGCCGTCGCCGGCGGCTACGCCGACCTCGTCGTCTACGGCCGCCTCTTCCTGGCCAACCCGGACCTCCCCCGGAGGTTCCGGCTCGGCGCGCCGCTCAACGGGTACGACAGGGCGACGTTCTACACCGCCGACCCCGTCGCCGGCTACACCGACTACCCGTTCCTCGACGACGACGGCGACGACGGCCTCGCGGCGTCGGCGGCGTCGGCGAGCTCCAACAAGAGCGGCGATCAGGACGGCGTTTAGCTCCGAGGCAGTACACTACTGCAACTGCACCTGAATAATTCTTAGCTTTTTTGCTGCTGCTTAAGCTTTAATAATGTTGACAATCGAGAGCTCTCTTCGTTGATCCAAACCAtat   ]
[+] EMBL CF321239             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGCAACTGCACCTGAATAATTCTTAGCTTTTTTGCTGCTGCTTAAGCTTTAATAATGTTGACAATCGAGAGCTCTCTTCGTTGATCCAAACCAAAAAA ]
[-] EMBL CF321240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAACTGCACCTGAATAATTCTTAGCTTTTTTGCTGCTGCTTAAGCTTTAATAATGTTGACAATCGAGAGCTCTCTTCGTTGATCCAAACCAAAAAAA]


>consensus_5427#0 TACTCATGGGTGTCTTTCAAAAGGGAGAAGATCAGAAAGGAGAGAGTGCAAATATGAAGC CTATACCTCTTCTAAGTTCTTATGATATGGGGAAGTTCAACTTGTCACACAGGGTTGTGC TAGCACCACTAACAAGATCTAGATCATATGACAATCTCCCGCAATCACATGCCATGGAAT ACTACTCACAGAGGGCAACCAAAGGAGGCCTTCTAATTGCTGAAGCTACAGGTGTGTCAT CTGATGCACAAGGGATGAGTGTAATCCCTCACACCCCAGGGATATGGACCAAGGAACAAG TAGAGGCATGGAAGCCTATTGTAGATGCAGTGCATGCTAAGGGTGGTATATTTTTCTGTC AAATCTGGCATGTTGGAAGAGCATCGGACATGGAGGAACGGCCCATCTCAAGCACAGATA AACCCATAGAGAAGACTGAAGAGAACTACTTCCTGGGTTTCTCCACCCCAAGGAGCTTAA CTGTTGAAGAGATCCCTGATGTCATCAAGCATTTCACACTTGCTGCCAAAAATGCCTTGG AGGCTGGTTTTGATGGGGTTGAGGTTCACGCCGCAAACGGCTTCCTCCTGGACCAGTTCA TGAAGGACGGCGTCAACGCCCGCGCCGACGAGTACGGCGGCGGCGTGGCGGGCCGCTGCC GCTTCGCGCTGGAGGTGGTCGACGCCGTGGCGGCGGAGGCCGGGGCCGGCCGCACCGGCG TCCGCCTCTCCCCGTACTCCCGCTGCCTCGACTGCGCCGACTCCGACCCGGACGCGCTCG CCGCCCACATGGCGCGCGAGCTGGGCTCGCGCGGCGTCCTCTACTGCAACGTGGTGGAGC CGGAGATGGTGGCGACGCCGGCGGAGGGCGGCAGCGGCGGCGAGACGATGCGGATCCCGC ACCGGCTGCGCGCCGTGCGGGAGGCGTTCGCCGGCACGCTGATGGTCGGCGGCGGGTACG ACAGGGAGGAGGGCAACTGGGCCGTCGCCGGCGGCTACGCCGACCTCGTCGTCTACGGCC GCCTCTTCCTGGCCAACCCGGACCTCCCCCGGAGGTTCCGGCTCGGCGCGCCGCTCAACG GGTACGACAGGGCGACGTTCTACACCGCCGACCCCGTCGCCGGCTACACCGACTACCCGT TCCTCGACGACGACGGCGACGACGGCCTCGCGGCGTCGGCGGCGTCGGCGAGCTCCAACA AGAGCGGCGATCAGGACGGCGTTTAGCTCCGAGGCAGTACACTACTGCAACTGCACCTGA ATAATTCTTAGCTTTTTTGCTGCTGCTTAAGCTTTAATAATGTTGACAATCGAGAGCTCT CTTCGTTGATCCAAACCAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)