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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5438 cluster # 5438       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5438#0 length = 463 sequences # 3  

consensusID : consensus_5438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 463
fasta sequence
                              [TGCGGCAGGGCGTGTGTGTGGTTTGAGGAGAAGGAATCTGATGGAGCGGGAAATTTGCAGAGGGAAGGTGAACTATATGTGGAAAACCTCTCTGCAAAAGAGAGATAAGGAGGTAGGGATGCAGAGAGGTGCTCCAGGGACCCGTATGCCGCCGGGTCACCGGATCTGCACCCCGCCGTCTTCCGTCTCCGCCTTCCGTTTCTGCACCGTAATGATGCTGCTTGCCGATTTGACTGCGAATAGGAGTAGATTTGACTGCCCGATTGATTGATAGATCCATTGTTTACCACAGAAACAATAATAATACTCTACTACTACTCCTACATAGTAGGAGTACCTTGCCTATTGTATGATACTAGAAGTAGTAAATTGATGGTACA-GGATAATACAGACTTATAAATTTCTTAAAAAAGCGATGGTACAGGATACTACTGGGAGTAGACTTTATAATTTTTGGCTGTGC]

[+] EMBL AU070902             [TGCGGCAGGGCGTGTGTGTGGTTTGAGGAGAAGGAATCTGATGGAGCGGGAAATTTGCAGAGGGAAGGTGAACTATATGTGGAAAACCTCTCTGCAAAAGAGAGATAAGGAGGTAGGGATGCAGAGAGGTGCTCCAGGGACCCGTATGCCGCCGGGTCACCGGATCTGCACCCCGCCGTCTTCCGTCTCCGCCTTCCGTTTCTGCACCGTAATGATGCTGCTTGCCGATTTGACTGCGAATAGGAGTAGATTTGACTGCCCGATTGATTGATAGATCCATTGTTTACCACAGAAACAATAATAATACTCTACTACTACTCCTACATAGTAGGAGTACCTTGCCTATTGTATGATACTAGAAGTAGTAAATTGATGGTACAGGGATAATACAGACTTATAAATTTCTTAAAAAA                                                   ]
[+] EMBL AK066871             [              TGTGTGGTTTGAGGAGAAGGAATCTGATGGAGCGGGAAATTTGCAGAGGGAAGGTGAACTATATGTGGAAAACCTCTCTGCAAAAGAGAGATAAGGAGGTAGGGATGCAGAGAGGTGCTCCAGGGACCCGTATGCCGCCGGGTCACCGGATCTGCACCCCGCCGTCTTCCGTCTCCGCCTTCCGTTTCTGCACCGTAATGATGCTGCTTGCCGATTTGACTGCGAATAGGAGTAGATTTGACTGCCCGATTGATTGATAGATCCATTGTTTACCACAGAAACAATAATAATACTCTACTACTACTCCTACATAGTAGGAGTACCTTGCCTATTGTATGATACTAGAAGTAGTAAATTGATGGTACA GGATAATACAGACTTATAA                                                                ]
[+] EMBL CB680160             [                                                 GAAATTTGCAGAGGGAAGGTGAACTATATGTGGAAAACCTCTCTGCAAAAGAGAGATAAGGAGGTAGGGATGCAGAGAGGTGCTCCAGGGACCCGTATGCCGCCGGGTCACCGGATCTGCACCCCGCCGTCTTCCGTCTCCGCCTTCCGTTTCTGCACCGTAATGATGCTGCTTGCCGATTTGACTGCGAATAGGAGTAGATTTGACTGCCCGATTGATTGATAGATCCATTGTTTACCACAGAAACAATAATAATACTCTACTACTACTCCTACATAGTAGGAGTACCTTGCCTATTGTATGATACTAGAAGTAGTAAATTGATGGTACA GGATAATACAGACTTATAAATTTCTTATTAGGGCGATGGTACAGGATACTACTGGGAGTAGACTTTATAATTTTTGGCTGTGC]


>consensus_5438#0 TGCGGCAGGGCGTGTGTGTGGTTTGAGGAGAAGGAATCTGATGGAGCGGGAAATTTGCAG AGGGAAGGTGAACTATATGTGGAAAACCTCTCTGCAAAAGAGAGATAAGGAGGTAGGGAT GCAGAGAGGTGCTCCAGGGACCCGTATGCCGCCGGGTCACCGGATCTGCACCCCGCCGTC TTCCGTCTCCGCCTTCCGTTTCTGCACCGTAATGATGCTGCTTGCCGATTTGACTGCGAA TAGGAGTAGATTTGACTGCCCGATTGATTGATAGATCCATTGTTTACCACAGAAACAATA ATAATACTCTACTACTACTCCTACATAGTAGGAGTACCTTGCCTATTGTATGATACTAGA AGTAGTAAATTGATGGTACAGGATAATACAGACTTATAAATTTCTTAAAAAAGCGATGGT ACAGGATACTACTGGGAGTAGACTTTATAATTTTTGGCTGTGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)