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Oryza sativa
cluster # 5446 cluster # 5446       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5446#0 length = 3374 sequences # 1  
 consensus_5446#1 length = 491 sequences # 2  
consensusID : consensus_5446#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3374
fasta sequence 
                              [CGGCGCAGATACGTACAGGGAGGGAGCTCCCACACGAATCGCCCCTCTCCTTCCACCGCCGCCGCCTCCTCCTCCTCCTCCTCCAAGCAAACTCCCAAACCCAACTCCGCCTGCCCCCCCCCTCCCTCCAAACCCATGGGAGCGCGGCCTCTCTAGGGTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCATGTTCGAGGATTTGGTGAGCAAGGTGCTCCCGGCCCTCCTCGGCCGCTACGTCAGCTTCCAGAAGGACCAGCTCACCATTAACATCTGGAATCAGGAAATAATATTGGTAGATGTAGAGCTGATTCTGGAAGCCTTCGACTACCTGCAGTTGCCATTCGCATTGAAGAAAGGACGGATTGGCAAACTAAGCGTCAGGATTCCATGGAAAACACTTGGGTGGGGTGCCATAATTATTGCCATAGAAGACGTGTTTATCTGTGCATGTCCACGGGAGGACTCTGAGTGGAGTTCAGATTCTCTGGATAAGAGAGAGTTAGATGGAAAATTGGCTAAACTTAAAGCTATTGAGCTTGCTAAGATTTCCAGAGGAATTACAGATAACCAAACGGGGCAATCACTTTTATCCTACATATTAGCAAAGATACTGGACAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATGCTGATAACTACAAAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGATACAAACGGATCCGAAGAAACAAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAGATGAAGTAAACAAGACAGTAGAGATATCCAATGTTGGCATTTACTGTCATCACTTGGATGAACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATGAATTGGCCCATCCAAGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGCTTGCTAACAAAGCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAACTGCTCTGATCCTATCGATTGATGAAATCCAGATTCAACAAATCTTGAATCTTTGTGATTACTTCTCCATCTGTGCTTTGCGAACAAAGTATGGCCGTTATCGTCCCTCTCAAAGTTCTTTATCTAAGAGACATAAAGGTTGGCAGAGGATGTGGTGGCACTATGCTCAGAGATCCGTTTTAGCAGATGTTCGCAGAGAACTGAGGAAAACTTCATGGAATTACTTGGGGCAACGACTGGACTGCCGTCGGAAATATGTCAATTTTTACAGAATGAAATTGGAGCTTTTGCAGAAAGGACAGCTTGTTAGTGAAGACATTCTACAAGAGCTGGAAAATATGGACAGAGAAGGCGATATAGATGATATACTTAACTACAGAACTATTGCAGAGCAGAAATTACAGGAAGCATTGGTGAAATCTACCAAAGATAATTTTTCTAGTCCAGGAAGTCCTCGAATTGATGATCAGTCAGCTGGGGCAGGCCAAGGATGGTTAAAGTGGCTTTCTCGTGGAATGCTTGGTGCTGGTGGAACAGCTGATACCAGCTCATTTGCTGATGTTTCAGATGACATTATTAAGGATATATACGAGGGAACGGAATTCCATCCTATTTCTTCTGCTGAAAATCATTTGACAAAAGAAAACCACTATTCTTTATTTGTTAGGTTATCTTTTTCTGAGATCCTTGTAAGCATCACCTCCAGGCAAGTGTTGCATACCTATATCACCGGTACTTCCACGTTATACTGTTGCAGACATTCCATTACCAATTATAATAAATTTTAGGTCAGCGCTGCTAATTTGCTAAATATTGCAGAAGCAACAAGCTAAGTAGTTAGTTTTTGGGCCACATTTAGTAAAGTAATTTCTATTATGAATTTGAAATGCAGTTGCTTACCTAGCTGAGTAAAACAAGAGTAGCCCAAAAGGGCCCTGTGTGATGAGCGCTCCCTGAGCTCATTTTGTTGTAAACAATCACAATAACAGCTTCAACCTTCATGAAACAATTAAATGTTAGTATTTATTAGATTCTGTTTGGATGGTGGTAACTCCTGATAAACTGCTGTCCATCCTAACGACTTAACCCCCCATGTACCATACTCACAAGCACCAAGAACACCATTTTTCCTTGAACTTAACTAAAACTTTTAGAGTCTACAGAAGTTCTTATCTCTGTAGTTTCTTGAAAGTCTTTCCTTGTTATACTTGCTGTTTTGTCAGATGGGTGTCTATTGGTGTGGTGGGCTTGTGGCAGTTAAAAAACCTGTAGCTCCTACTTCCTATAGTTTGGTTATTTGCTACTGATGATCAAGAGTTTTATTTCCTATTTGTTATGCAATGAACCTTATATGACAATGGGCCGATGGTCCAAAGTATTTATAACAGAGCTACAGACAAAAATACGCATAAATACCCTATGCTAGAAGATAAATGCAGAGCTATATGCATATGTGTGACACTGTTTACTTGGTTTCATTTATCTGGGGAAACATTTATTGTTGGTTAACTTCGCAAAATGTTTTATGGTTTAGGAAAATTGGCATGAAACTTGTAGATGCAATGTTCACTGGGCTTGGTGTTGAATGTAAAATATGGGATGATTCAACAACTATCCTTGCCTGTCTTGATTCACTTGAGATCATCAACCCATTAAATGAAAATAAAGTCTTGCTGGCTGAAAAGCACTGGTGATGGTCTGGGGACACCTGTTATCAGTGTTCAAGTTGACTGTCCTAAGTCAAACCATAGCCCAGAAGCTTTGACACGGGTTGTTGTCCAGGAATTCAGTGCCATATATGAACCAGTGTTCATCTATAATCTCATGCACATCTATGATTTGTTTTCCTCCTTCCAGTTTCAGCATGATAGGGTGAGTGTTCTATTGTACACCCATGTTCTATTGCTTGGGAGGATAAACATAAACATATTGATGCATTATGCATATTATGTGCTTCCCCCTGCACTAACGTTATCTCATTTTGTAATGAGTAAATTGCATTCACAGTGCATCAACTTGTCAGGTGGGTGCAATTTGGTGCAATAACTTGAAAAATGAGCGTTCTAGTGCAACAACTTGGCATGTATGTGCAATTTAATATGAGAACTTTATCAGTGATCGTATAAATTCAACAACTTGCAAGGTAGGTACGGTTTTGATACAATAAATTAAAAGGTTATGCAACAACTTAATTATTTGGAGCATTTTTTTTATATAAATTCAATTTTTAAGTACTACTTTTGACAATATACTAGCACGGATGTGTATAAGTATGTTTATATTTTTATGCTAATAACTGATAACTGAAAGCCAATTAAATTGGATGTAGAAATTATTATATTTCGATTGATATT]

[+] EMBL AK065511             [CGGCGCAGATACGTACAGGGAGGGAGCTCCCACACGAATCGCCCCTCTCCTTCCACCGCCGCCGCCTCCTCCTCCTCCTCCTCCAAGCAAACTCCCAAACCCAACTCCGCCTGCCCCCCCCCTCCCTCCAAACCCATGGGAGCGCGGCCTCTCTAGGGTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCATGTTCGAGGATTTGGTGAGCAAGGTGCTCCCGGCCCTCCTCGGCCGCTACGTCAGCTTCCAGAAGGACCAGCTCACCATTAACATCTGGAATCAGGAAATAATATTGGTAGATGTAGAGCTGATTCTGGAAGCCTTCGACTACCTGCAGTTGCCATTCGCATTGAAGAAAGGACGGATTGGCAAACTAAGCGTCAGGATTCCATGGAAAACACTTGGGTGGGGTGCCATAATTATTGCCATAGAAGACGTGTTTATCTGTGCATGTCCACGGGAGGACTCTGAGTGGAGTTCAGATTCTCTGGATAAGAGAGAGTTAGATGGAAAATTGGCTAAACTTAAAGCTATTGAGCTTGCTAAGATTTCCAGAGGAATTACAGATAACCAAACGGGGCAATCACTTTTATCCTACATATTAGCAAAGATACTGGACAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATGCTGATAACTACAAAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGATACAAACGGATCCGAAGAAACAAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAGATGAAGTAAACAAGACAGTAGAGATATCCAATGTTGGCATTTACTGTCATCACTTGGATGAACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATGAATTGGCCCATCCAAGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGCTTGCTAACAAAGCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAACTGCTCTGATCCTATCGATTGATGAAATCCAGATTCAACAAATCTTGAATCTTTGTGATTACTTCTCCATCTGTGCTTTGCGAACAAAGTATGGCCGTTATCGTCCCTCTCAAAGTTCTTTATCTAAGAGACATAAAGGTTGGCAGAGGATGTGGTGGCACTATGCTCAGAGATCCGTTTTAGCAGATGTTCGCAGAGAACTGAGGAAAACTTCATGGAATTACTTGGGGCAACGACTGGACTGCCGTCGGAAATATGTCAATTTTTACAGAATGAAATTGGAGCTTTTGCAGAAAGGACAGCTTGTTAGTGAAGACATTCTACAAGAGCTGGAAAATATGGACAGAGAAGGCGATATAGATGATATACTTAACTACAGAACTATTGCAGAGCAGAAATTACAGGAAGCATTGGTGAAATCTACCAAAGATAATTTTTCTAGTCCAGGAAGTCCTCGAATTGATGATCAGTCAGCTGGGGCAGGCCAAGGATGGTTAAAGTGGCTTTCTCGTGGAATGCTTGGTGCTGGTGGAACAGCTGATACCAGCTCATTTGCTGATGTTTCAGATGACATTATTAAGGATATATACGAGGGAACGGAATTCCATCCTATTTCTTCTGCTGAAAATCATTTGACAAAAGAAAACCACTATTCTTTATTTGTTAGGTTATCTTTTTCTGAGATCCTTGTAAGCATCACCTCCAGGCAAGTGTTGCATACCTATATCACCGGTACTTCCACGTTATACTGTTGCAGACATTCCATTACCAATTATAATAAATTTTAGGTCAGCGCTGCTAATTTGCTAAATATTGCAGAAGCAACAAGCTAAGTAGTTAGTTTTTGGGCCACATTTAGTAAAGTAATTTCTATTATGAATTTGAAATGCAGTTGCTTACCTAGCTGAGTAAAACAAGAGTAGCCCAAAAGGGCCCTGTGTGATGAGCGCTCCCTGAGCTCATTTTGTTGTAAACAATCACAATAACAGCTTCAACCTTCATGAAACAATTAAATGTTAGTATTTATTAGATTCTGTTTGGATGGTGGTAACTCCTGATAAACTGCTGTCCATCCTAACGACTTAACCCCCCATGTACCATACTCACAAGCACCAAGAACACCATTTTTCCTTGAACTTAACTAAAACTTTTAGAGTCTACAGAAGTTCTTATCTCTGTAGTTTCTTGAAAGTCTTTCCTTGTTATACTTGCTGTTTTGTCAGATGGGTGTCTATTGGTGTGGTGGGCTTGTGGCAGTTAAAAAACCTGTAGCTCCTACTTCCTATAGTTTGGTTATTTGCTACTGATGATCAAGAGTTTTATTTCCTATTTGTTATGCAATGAACCTTATATGACAATGGGCCGATGGTCCAAAGTATTTATAACAGAGCTACAGACAAAAATACGCATAAATACCCTATGCTAGAAGATAAATGCAGAGCTATATGCATATGTGTGACACTGTTTACTTGGTTTCATTTATCTGGGGAAACATTTATTGTTGGTTAACTTCGCAAAATGTTTTATGGTTTAGGAAAATTGGCATGAAACTTGTAGATGCAATGTTCACTGGGCTTGGTGTTGAATGTAAAATATGGGATGATTCAACAACTATCCTTGCCTGTCTTGATTCACTTGAGATCATCAACCCATTAAATGAAAATAAAGTCTTGCTGGCTGAAAAGCACTGGTGATGGTCTGGGGACACCTGTTATCAGTGTTCAAGTTGACTGTCCTAAGTCAAACCATAGCCCAGAAGCTTTGACACGGGTTGTTGTCCAGGAATTCAGTGCCATATATGAACCAGTGTTCATCTATAATCTCATGCACATCTATGATTTGTTTTCCTCCTTCCAGTTTCAGCATGATAGGGTGAGTGTTCTATTGTACACCCATGTTCTATTGCTTGGGAGGATAAACATAAACATATTGATGCATTATGCATATTATGTGCTTCCCCCTGCACTAACGTTATCTCATTTTGTAATGAGTAAATTGCATTCACAGTGCATCAACTTGTCAGGTGGGTGCAATTTGGTGCAATAACTTGAAAAATGAGCGTTCTAGTGCAACAACTTGGCATGTATGTGCAATTTAATATGAGAACTTTATCAGTGATCGTATAAATTCAACAACTTGCAAGGTAGGTACGGTTTTGATACAATAAATTAAAAGGTTATGCAACAACTTAATTATTTGGAGCATTTTTTTTATATAAATTCAATTTTTAAGTACTACTTTTGACAATATACTAGCACGGATGTGTATAAGTATGTTTATATTTTTATGCTAATAACTGATAACTGAAAGCCAATTAAATTGGATGTAGAAATTATTATATTTCGATTGATATT]




>consensus_5446#0
CGGCGCAGATACGTACAGGGAGGGAGCTCCCACACGAATCGCCCCTCTCCTTCCACCGCC
GCCGCCTCCTCCTCCTCCTCCTCCAAGCAAACTCCCAAACCCAACTCCGCCTGCCCCCCC
CCTCCCTCCAAACCCATGGGAGCGCGGCCTCTCTAGGGTCCTCCTCCTCCGCCGCCGCCG
CCGCCGCCATGTTCGAGGATTTGGTGAGCAAGGTGCTCCCGGCCCTCCTCGGCCGCTACG
TCAGCTTCCAGAAGGACCAGCTCACCATTAACATCTGGAATCAGGAAATAATATTGGTAG
ATGTAGAGCTGATTCTGGAAGCCTTCGACTACCTGCAGTTGCCATTCGCATTGAAGAAAG
GACGGATTGGCAAACTAAGCGTCAGGATTCCATGGAAAACACTTGGGTGGGGTGCCATAA
TTATTGCCATAGAAGACGTGTTTATCTGTGCATGTCCACGGGAGGACTCTGAGTGGAGTT
CAGATTCTCTGGATAAGAGAGAGTTAGATGGAAAATTGGCTAAACTTAAAGCTATTGAGC
TTGCTAAGATTTCCAGAGGAATTACAGATAACCAAACGGGGCAATCACTTTTATCCTACA
TATTAGCAAAGATACTGGACAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATG
CTGATAACTACAAAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGA
TACAAACGGATCCGAAGAAACAAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAG
ATGAAGTAAACAAGACAGTAGAGATATCCAATGTTGGCATTTACTGTCATCACTTGGATG
AACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATG
AATTGGCCCATCCAAGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGC
TTGCTAACAAAGCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAA
CTGCTCTGATCCTATCGATTGATGAAATCCAGATTCAACAAATCTTGAATCTTTGTGATT
ACTTCTCCATCTGTGCTTTGCGAACAAAGTATGGCCGTTATCGTCCCTCTCAAAGTTCTT
TATCTAAGAGACATAAAGGTTGGCAGAGGATGTGGTGGCACTATGCTCAGAGATCCGTTT
TAGCAGATGTTCGCAGAGAACTGAGGAAAACTTCATGGAATTACTTGGGGCAACGACTGG
ACTGCCGTCGGAAATATGTCAATTTTTACAGAATGAAATTGGAGCTTTTGCAGAAAGGAC
AGCTTGTTAGTGAAGACATTCTACAAGAGCTGGAAAATATGGACAGAGAAGGCGATATAG
ATGATATACTTAACTACAGAACTATTGCAGAGCAGAAATTACAGGAAGCATTGGTGAAAT
CTACCAAAGATAATTTTTCTAGTCCAGGAAGTCCTCGAATTGATGATCAGTCAGCTGGGG
CAGGCCAAGGATGGTTAAAGTGGCTTTCTCGTGGAATGCTTGGTGCTGGTGGAACAGCTG
ATACCAGCTCATTTGCTGATGTTTCAGATGACATTATTAAGGATATATACGAGGGAACGG
AATTCCATCCTATTTCTTCTGCTGAAAATCATTTGACAAAAGAAAACCACTATTCTTTAT
TTGTTAGGTTATCTTTTTCTGAGATCCTTGTAAGCATCACCTCCAGGCAAGTGTTGCATA
CCTATATCACCGGTACTTCCACGTTATACTGTTGCAGACATTCCATTACCAATTATAATA
AATTTTAGGTCAGCGCTGCTAATTTGCTAAATATTGCAGAAGCAACAAGCTAAGTAGTTA
GTTTTTGGGCCACATTTAGTAAAGTAATTTCTATTATGAATTTGAAATGCAGTTGCTTAC
CTAGCTGAGTAAAACAAGAGTAGCCCAAAAGGGCCCTGTGTGATGAGCGCTCCCTGAGCT
CATTTTGTTGTAAACAATCACAATAACAGCTTCAACCTTCATGAAACAATTAAATGTTAG
TATTTATTAGATTCTGTTTGGATGGTGGTAACTCCTGATAAACTGCTGTCCATCCTAACG
ACTTAACCCCCCATGTACCATACTCACAAGCACCAAGAACACCATTTTTCCTTGAACTTA
ACTAAAACTTTTAGAGTCTACAGAAGTTCTTATCTCTGTAGTTTCTTGAAAGTCTTTCCT
TGTTATACTTGCTGTTTTGTCAGATGGGTGTCTATTGGTGTGGTGGGCTTGTGGCAGTTA
AAAAACCTGTAGCTCCTACTTCCTATAGTTTGGTTATTTGCTACTGATGATCAAGAGTTT
TATTTCCTATTTGTTATGCAATGAACCTTATATGACAATGGGCCGATGGTCCAAAGTATT
TATAACAGAGCTACAGACAAAAATACGCATAAATACCCTATGCTAGAAGATAAATGCAGA
GCTATATGCATATGTGTGACACTGTTTACTTGGTTTCATTTATCTGGGGAAACATTTATT
GTTGGTTAACTTCGCAAAATGTTTTATGGTTTAGGAAAATTGGCATGAAACTTGTAGATG
CAATGTTCACTGGGCTTGGTGTTGAATGTAAAATATGGGATGATTCAACAACTATCCTTG
CCTGTCTTGATTCACTTGAGATCATCAACCCATTAAATGAAAATAAAGTCTTGCTGGCTG
AAAAGCACTGGTGATGGTCTGGGGACACCTGTTATCAGTGTTCAAGTTGACTGTCCTAAG
TCAAACCATAGCCCAGAAGCTTTGACACGGGTTGTTGTCCAGGAATTCAGTGCCATATAT
GAACCAGTGTTCATCTATAATCTCATGCACATCTATGATTTGTTTTCCTCCTTCCAGTTT
CAGCATGATAGGGTGAGTGTTCTATTGTACACCCATGTTCTATTGCTTGGGAGGATAAAC
ATAAACATATTGATGCATTATGCATATTATGTGCTTCCCCCTGCACTAACGTTATCTCAT
TTTGTAATGAGTAAATTGCATTCACAGTGCATCAACTTGTCAGGTGGGTGCAATTTGGTG
CAATAACTTGAAAAATGAGCGTTCTAGTGCAACAACTTGGCATGTATGTGCAATTTAATA
TGAGAACTTTATCAGTGATCGTATAAATTCAACAACTTGCAAGGTAGGTACGGTTTTGAT
ACAATAAATTAAAAGGTTATGCAACAACTTAATTATTTGGAGCATTTTTTTTATATAAAT
TCAATTTTTAAGTACTACTTTTGACAATATACTAGCACGGATGTGTATAAGTATGTTTAT
ATTTTTATGCTAATAACTGATAACTGAAAGCCAATTAAATTGGATGTAGAAATTATTATA
TTTCGATTGATATT

consensusID : consensus_5446#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 491
fasta sequence 
                              [CCGCAAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATGCTGATAACTAC-AAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGATACAACGGATCCGAAGAAACAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAGATGAAGTAAACAAGACAGTAGAGATATCC-ATGTTGGCATTTACTGTCATCACTTGGATGAACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATGAATTGGCCCATCC-AGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGCTTGCTAACAAGCCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAACTGCTCTGGTTCGTTTTGTTCTATTATTAGCACAGTGTAATTATGTTAAAATATTCTGGGAATGAATTGTTTATTGTCTCCTTAAAAAAAA]

[+] EMBL BI803452             [CCGCAAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATGCTGATAACTAC AAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGATACAACGGATCCGAAGAAACAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAGATGAAGTAAACAAGACAGTAGAGATATCC ATGTTGGCATTTACTGTCATCACTTGGATGAACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATGAATTGGCCCATCC AGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGCTTGCTAACAAGCCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAACTGCTCTGGTTCGTTTTGTTCTATTATTAGCACAGTGTAATTATGTTAAAATATTCTGGGAATGAATTGTTTATTGTCTCCTTAAAAAAAA]
[+] EMBL BI803245             [             AGTTTCTATACGAAATGTTCATATCACCTATGCTGATAACTACAAAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGATACAACGGATCCGAAGAAACAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAGATGAAGTAAACAAGACAGTAGAGATATCCAATGTTGGCATTTACTGTCATCACTTGGATGAACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATGAATTGGCCCATCCAAGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGCTTGCTAACAAG CTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAACTGCTCTGGTTCGTTTTGTTCTATTATTAGCCCAGTGTAATTATGTTAAAATATTCTGGGAATGAATTGTTTATTGTCTCCTTAAAAAAAA]




>consensus_5446#1
CCGCAAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATGCTGATAACTACAAGA
TCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGATACAACGGATCCGAAG
AAACAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAGATGAAGTAAACAAGACAG
TAGAGATATCCATGTTGGCATTTACTGTCATCACTTGGATGAACAGCAGGGTTCATGTGA
TACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATGAATTGGCCCATCCAGAGAT
GCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGCTTGCTAACAAGCCTGGAAAG
CTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAACTGCTCTGGTTCGTTTTGTT
CTATTATTAGCACAGTGTAATTATGTTAAAATATTCTGGGAATGAATTGTTTATTGTCTC
CTTAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5446#0      CGGCGCAGATACGTACAGGGAGGGAGCTCCCACACGAATCGCCCCTCTCCTTCCACCGCC 60
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GCCGCCTCCTCCTCCTCCTCCTCCAAGCAAACTCCCAAACCCAACTCCGCCTGCCCCCCC 120
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CCTCCCTCCAAACCCATGGGAGCGCGGCCTCTCTAGGGTCCTCCTCCTCCGCCGCCGCCG 180
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CCGCCGCCATGTTCGAGGATTTGGTGAGCAAGGTGCTCCCGGCCCTCCTCGGCCGCTACG 240
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TCAGCTTCCAGAAGGACCAGCTCACCATTAACATCTGGAATCAGGAAATAATATTGGTAG 300
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      ATGTAGAGCTGATTCTGGAAGCCTTCGACTACCTGCAGTTGCCATTCGCATTGAAGAAAG 360
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GACGGATTGGCAAACTAAGCGTCAGGATTCCATGGAAAACACTTGGGTGGGGTGCCATAA 420
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TTATTGCCATAGAAGACGTGTTTATCTGTGCATGTCCACGGGAGGACTCTGAGTGGAGTT 480
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CAGATTCTCTGGATAAGAGAGAGTTAGATGGAAAATTGGCTAAACTTAAAGCTATTGAGC 540
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TTGCTAAGATTTCCAGAGGAATTACAGATAACCAAACGGGGCAATCACTTTTATCCTACA 600
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TATTAGCAAAGATACTGGACAACATCCAAGTTTCTATACGAAATGTTCATATCACCTATG 660
consensus_5446#1      --------------CCGCA-AACATCCAAGTTTCTATACGAAATGTTCATATCACCTATG 45
                                    * * * ****************************************

consensus_5446#0      CTGATAACTACAAAGATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGA 720
consensus_5446#1      CTGATAACTACAA-GATCAGGGAAATTTCATGTTTGGTTTGGAATTCTCCAGTCTCTCGA 104
                      ************* **********************************************

consensus_5446#0      TACAAACGGATCCGAAGAAACAAAGTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAG 780
consensus_5446#1      TACAA-CGGATCCGAAGAAACAA-GTTTTGCCATGTCTTTGATGGTCATGTCAAGACAAG 162
                      ***** ***************** ************************************

consensus_5446#0      ATGAAGTAAACAAGACAGTAGAGATATCCAATGTTGGCATTTACTGTCATCACTTGGATG 840
consensus_5446#1      ATGAAGTAAACAAGACAGTAGAGATATCCA-TGTTGGCATTTACTGTCATCACTTGGATG 221
                      ****************************** *****************************

consensus_5446#0      AACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATG 900
consensus_5446#1      AACAGCAGGGTTCATGTGATACTGGTGGTCTTACTGAAACTAATTTCAGTTTCAGTCATG 281
                      ************************************************************

consensus_5446#0      AATTGGCCCATCCAAGAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGC 960
consensus_5446#1      AATTGGCCCATCCA-GAGATGCTTATCTTCTAAATCCATTTAACGTGACTATATTTGTGC 340
                      ************** *********************************************

consensus_5446#0      TTGCTAACAAAGCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAA 1020
consensus_5446#1      TTGCTAACAAGCCTGGAAAGCTTGATGGTGCACCTCGGTATAACATAACTGTAGAGCTAA 400
                      **********  ************************************************

consensus_5446#0      CTGCTCTGATCC-TATCGATTGATGAAATCCAGATTCAACAAATCTTGAATCTTTGTG-- 1077
consensus_5446#1      CTGCTCTGGTTCGTTTTGTTCTATTATTAGCACAGTGTAATTATGTTAAAATATTCTGGG 460
                      ******** * * * * * *  ** *    ** * *  *   ** ** **   ** **  

consensus_5446#0      -ATTACTTCTCCATCTGTGCTTTGCGAACAAAGTATGGCCGTTATCGTCCCTCTCAAAGT 1136
consensus_5446#1      AATGAATTGTTTATTGTCTCCTTAAAAAAAA----------------------------- 491
                       ** * ** *  **     * **   ** **                             

consensus_5446#0      TCTTTATCTAAGAGACATAAAGGTTGGCAGAGGATGTGGTGGCACTATGCTCAGAGATCC 1196
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GTTTTAGCAGATGTTCGCAGAGAACTGAGGAAAACTTCATGGAATTACTTGGGGCAACGA 1256
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CTGGACTGCCGTCGGAAATATGTCAATTTTTACAGAATGAAATTGGAGCTTTTGCAGAAA 1316
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GGACAGCTTGTTAGTGAAGACATTCTACAAGAGCTGGAAAATATGGACAGAGAAGGCGAT 1376
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      ATAGATGATATACTTAACTACAGAACTATTGCAGAGCAGAAATTACAGGAAGCATTGGTG 1436
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AAATCTACCAAAGATAATTTTTCTAGTCCAGGAAGTCCTCGAATTGATGATCAGTCAGCT 1496
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GGGGCAGGCCAAGGATGGTTAAAGTGGCTTTCTCGTGGAATGCTTGGTGCTGGTGGAACA 1556
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GCTGATACCAGCTCATTTGCTGATGTTTCAGATGACATTATTAAGGATATATACGAGGGA 1616
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      ACGGAATTCCATCCTATTTCTTCTGCTGAAAATCATTTGACAAAAGAAAACCACTATTCT 1676
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TTATTTGTTAGGTTATCTTTTTCTGAGATCCTTGTAAGCATCACCTCCAGGCAAGTGTTG 1736
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CATACCTATATCACCGGTACTTCCACGTTATACTGTTGCAGACATTCCATTACCAATTAT 1796
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AATAAATTTTAGGTCAGCGCTGCTAATTTGCTAAATATTGCAGAAGCAACAAGCTAAGTA 1856
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GTTAGTTTTTGGGCCACATTTAGTAAAGTAATTTCTATTATGAATTTGAAATGCAGTTGC 1916
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TTACCTAGCTGAGTAAAACAAGAGTAGCCCAAAAGGGCCCTGTGTGATGAGCGCTCCCTG 1976
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AGCTCATTTTGTTGTAAACAATCACAATAACAGCTTCAACCTTCATGAAACAATTAAATG 2036
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TTAGTATTTATTAGATTCTGTTTGGATGGTGGTAACTCCTGATAAACTGCTGTCCATCCT 2096
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AACGACTTAACCCCCCATGTACCATACTCACAAGCACCAAGAACACCATTTTTCCTTGAA 2156
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CTTAACTAAAACTTTTAGAGTCTACAGAAGTTCTTATCTCTGTAGTTTCTTGAAAGTCTT 2216
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TCCTTGTTATACTTGCTGTTTTGTCAGATGGGTGTCTATTGGTGTGGTGGGCTTGTGGCA 2276
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GTTAAAAAACCTGTAGCTCCTACTTCCTATAGTTTGGTTATTTGCTACTGATGATCAAGA 2336
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GTTTTATTTCCTATTTGTTATGCAATGAACCTTATATGACAATGGGCCGATGGTCCAAAG 2396
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TATTTATAACAGAGCTACAGACAAAAATACGCATAAATACCCTATGCTAGAAGATAAATG 2456
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CAGAGCTATATGCATATGTGTGACACTGTTTACTTGGTTTCATTTATCTGGGGAAACATT 2516
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TATTGTTGGTTAACTTCGCAAAATGTTTTATGGTTTAGGAAAATTGGCATGAAACTTGTA 2576
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GATGCAATGTTCACTGGGCTTGGTGTTGAATGTAAAATATGGGATGATTCAACAACTATC 2636
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      CTTGCCTGTCTTGATTCACTTGAGATCATCAACCCATTAAATGAAAATAAAGTCTTGCTG 2696
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GCTGAAAAGCACTGGTGATGGTCTGGGGACACCTGTTATCAGTGTTCAAGTTGACTGTCC 2756
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TAAGTCAAACCATAGCCCAGAAGCTTTGACACGGGTTGTTGTCCAGGAATTCAGTGCCAT 2816
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      ATATGAACCAGTGTTCATCTATAATCTCATGCACATCTATGATTTGTTTTCCTCCTTCCA 2876
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GTTTCAGCATGATAGGGTGAGTGTTCTATTGTACACCCATGTTCTATTGCTTGGGAGGAT 2936
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AAACATAAACATATTGATGCATTATGCATATTATGTGCTTCCCCCTGCACTAACGTTATC 2996
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TCATTTTGTAATGAGTAAATTGCATTCACAGTGCATCAACTTGTCAGGTGGGTGCAATTT 3056
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      GGTGCAATAACTTGAAAAATGAGCGTTCTAGTGCAACAACTTGGCATGTATGTGCAATTT 3116
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AATATGAGAACTTTATCAGTGATCGTATAAATTCAACAACTTGCAAGGTAGGTACGGTTT 3176
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TGATACAATAAATTAAAAGGTTATGCAACAACTTAATTATTTGGAGCATTTTTTTTATAT 3236
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      AAATTCAATTTTTAAGTACTACTTTTGACAATATACTAGCACGGATGTGTATAAGTATGT 3296
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TTATATTTTTATGCTAATAACTGATAACTGAAAGCCAATTAAATTGGATGTAGAAATTAT 3356
consensus_5446#1      ------------------------------------------------------------
                                                                                  

consensus_5446#0      TATATTTCGATTGATATT 3374
consensus_5446#1      ------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)