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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5453 cluster # 5453       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5453#0 length = 1024 sequences # 3  

consensusID : consensus_5453#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1024
fasta sequence
                              [GGGGGGGTCACACGGAAGTTGTCAAATTGTTACTAGAACTAGATGATTTTGGATTGGTGGAAATGGCTAAAGATAATGGGAAAAATTCCTTGCATTTTGCTGCTCGACAAGGGCACGTTGAAATTGTTAAAGCATTACTCGAGAAAGATCCTCAGCTAGCAAGAAGAAATGACAAGAAAGGTCAAACAGCCTTGCATATGGCTGTAAAAGGAACAAACTGTGATGTGCTTAGAGCACTTGTCGACGCTGATCCAGCAATTGTAATGCTGCCAGACAAAAATGGAAACACCGCCTTGCATGTAGCAACAAGGAAAAAGCGAGCAGAGATAGTTGCTGTTCTCTTGCGATTACCAGATACCCATGTCAATGCACTAACCAGAGACCACAAGACTGCGTATGATATAGCTGAAGCCTTGCCACTCTGTGAGGAGTCTTCTGAAATAAAGGATATTTTATCTCAGCATGGCGCACTCAGATCTAGGGAGCTGAATCAGCCTCGAGATGAGCTCCGAAAAACAGTGACAGAGATCAAGAAAGATGTCCACACACAGCTGGAACAGACAAGAAAAACGAACAAAAATGTGCATGGGATTGCTAAGGAACTCAGAAAGTTGCACAGAGAAGGCATCAATAATGCAACGAACTCTGTAACTGTTGTTGCAGTACTTTTTGCCATGGTAGCCTTTGCAGCCATATTCACTGTGCCTGGTGGGAATGCCAACAATGGAGTTGCGGTTGNTGNTCAAGCAGCCTCCTTCAGAATTTTCTTCATCTTCAATGCTATAGCTCTGTTTACATCATTGGCGGTGGTCGTAGTTCAGATAACGGTTGTCAGGGGAGAAACTAAGTCTGAGAGGAAGGTTGTTGAGGTGATCAACAAGCTTATGTGGCTGGCATCAGTTTGCACTACCATTTCTTTCATTGCCTCTTGCTATATTGTGCTAGGCCGCCATTTCCAATGGGCAGCACTACTAGTTAGTTTGATAGGTGGCATCACAATGGCTGGTGTTCTGGGTACCTCGGC]

[+] EMBL CA766136             [GGGGGGGTCACACGGAAGTTGTCAAATTGTTACTAGAACTAGATGATTTTGGATTGGTGGAAATGGCTAAAGATAATGGGAAAAATTCCTTGCATTTTGCTGCTCGACAAGGGCACGTTGAAATTGTTAAAGCATTACTCGAGAAAGATCCTCAGCTAGCAAGAAGAAATGACAAGAAAGGTCAAACAGCCTTGCATATGGCTGTAAAAGGAACAAACTGTGATGTGCTTAGAGCACTTGTCGACGCTGATCCAGCAATTGTAATGCTGCCAGACAAAAATGGAAACACCGCCTTGCATGTAGCAACAAGGAAAAAGCGAGCAGAGATAGTTGCTGTTCTCTTGCGATTACCAGATACCCATGTCAATGCACTAACCAGAGACCACAAGACTGCGTATGATATAGCTGAAGCCTTGCCACTCTGTGAGGAGTCTTCTGAAATAAAGGATATTTTATCTCAGCATGGCGCACTCAGATCTAGGGAGCTGAATCAGCCTCGAGATGAGCTCCGAAAAACAGTGACAGAGATCAAGAAAGATGTCCACACACAGCTGGAACAGACAAGAAAAACGAACAAAAATGTGCATGGGATTGCTAAGGAACTCAGAAAGTTGCACAGAGAAGGCATCAATAATGCAACGAACTCTGTAACTGTTGTTGCAGTACTTTTTGCCATGGTAGCCTTTGCAGCCATATTCACTGTGCCTGGTGGGAATGCCAACAATGGAGTTGCGGTTGNTGNTCAAGCAGCCTCCTTCAGAATTTTCTTCATCTTCAAT                                                                                                                                                                                                                                                     ]
[-] EMBL BF889467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCACGGTAGCCTTTGCAGCCATATTCACTGTGCCTGGTGGAAATGCCAACAATGGAGTTGCGGTTGTTGTTCAGGCAGCCTCCTTTAGAATTTTCTTCATCTTCAATGCTATAGCTCTGTTTACATCATTGGCGGTGGTCGTAGTTCAGATAACGGTTGTCAGGGGAGAAACTAAGTCTGAGAGGAAGGTTGTTGAGGTGATCAACAAGCTTATGTGGCTGGCATCAGTTTGCACTACCATTTCTTTCATTGCCTCTTGCTATATTGTGCTAGGCCGCCATTTCCAATGGGCAGCACTACTAGTTAGTTTGATAGGTGGCATCACAATGGCTGGTGT               ]
[+] EMBL AW070114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGATCAACAAGCTTATGTGGCTGGCATCAGTTTGCACTACCATTTCTTTCATTGCCTCCTGCTATATTGTGCTAGGCCGCCATTTCCAATGGGCAGCACTACTAGTTAGTTTGATAGGTGGCATCACAATGGCTGGTGTTCTGGGTACCTCGGC]


>consensus_5453#0 GGGGGGGTCACACGGAAGTTGTCAAATTGTTACTAGAACTAGATGATTTTGGATTGGTGG AAATGGCTAAAGATAATGGGAAAAATTCCTTGCATTTTGCTGCTCGACAAGGGCACGTTG AAATTGTTAAAGCATTACTCGAGAAAGATCCTCAGCTAGCAAGAAGAAATGACAAGAAAG GTCAAACAGCCTTGCATATGGCTGTAAAAGGAACAAACTGTGATGTGCTTAGAGCACTTG TCGACGCTGATCCAGCAATTGTAATGCTGCCAGACAAAAATGGAAACACCGCCTTGCATG TAGCAACAAGGAAAAAGCGAGCAGAGATAGTTGCTGTTCTCTTGCGATTACCAGATACCC ATGTCAATGCACTAACCAGAGACCACAAGACTGCGTATGATATAGCTGAAGCCTTGCCAC TCTGTGAGGAGTCTTCTGAAATAAAGGATATTTTATCTCAGCATGGCGCACTCAGATCTA GGGAGCTGAATCAGCCTCGAGATGAGCTCCGAAAAACAGTGACAGAGATCAAGAAAGATG TCCACACACAGCTGGAACAGACAAGAAAAACGAACAAAAATGTGCATGGGATTGCTAAGG AACTCAGAAAGTTGCACAGAGAAGGCATCAATAATGCAACGAACTCTGTAACTGTTGTTG CAGTACTTTTTGCCATGGTAGCCTTTGCAGCCATATTCACTGTGCCTGGTGGGAATGCCA ACAATGGAGTTGCGGTTGNTGNTCAAGCAGCCTCCTTCAGAATTTTCTTCATCTTCAATG CTATAGCTCTGTTTACATCATTGGCGGTGGTCGTAGTTCAGATAACGGTTGTCAGGGGAG AAACTAAGTCTGAGAGGAAGGTTGTTGAGGTGATCAACAAGCTTATGTGGCTGGCATCAG TTTGCACTACCATTTCTTTCATTGCCTCTTGCTATATTGTGCTAGGCCGCCATTTCCAAT GGGCAGCACTACTAGTTAGTTTGATAGGTGGCATCACAATGGCTGGTGTTCTGGGTACCT CGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)