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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5462 cluster # 5462       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5462#0 length = 526 sequences # 3  

consensusID : consensus_5462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 526
fasta sequence
                              [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAAACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCCTTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT]

[+] EMBL BI306730             [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAAACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCCTTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT]
[+] EMBL BI305830             [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAAACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCCTTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT]
[+] EMBL BI305868             [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGc                                                                                                                                                                                              ]


>consensus_5462#0 CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAA CCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCC CTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAA ACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAA AATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGT TCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATT CAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAA ACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCC TTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)