cluster # 5462

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Oryza sativa
cluster # 5462 cluster # 5462 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5462#0 length = 526 sequences # 3

consensusID : consensus_5462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 526
fasta sequence

                              [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAAACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCCTTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT]

[+] EMBL BI306730             [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAAACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCCTTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT]
[+] EMBL BI305830             [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAAACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCCTTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT]
[+] EMBL BI305868             [CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAACCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGc                                                                                                                                                                                              ]




>consensus_5462#0
CATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAACTCAAGACTGATAGAAGAGAGAA
CCGATGGGCAGATAAAGAATACAAAAAGAAACACTTAGGAACTGCCTTCAAATCTAACCC
CTTTGGAGGAGCTTCCCACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAA
ACAACCTAACTCTGCTATTCGAAAATGTGTCAGAGTTCAACTCATTAAAAACGGTAAAAA
AATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATGAAAACGACGAAGT
TCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTCGGAGATATTCCAGGAGTACGATT
CAAGATTGTTAAAGTTGCTGGAGTATCCCTCCTTGCTTTGTTTAAAGAAAAGAAAGAAAA
ACCCAAACATTAATTTTCTTGCGAATTTATTCTATTTGTGAAAAACAATAAATTATCCCC
TTAAAAAAAAAAAAAAAAAACAGAGCGGCCGGTCCAACATCAGAAT

clustalw multiple alignements is not computed in this case