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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 547 cluster # 547       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_547#0 length = 867 sequences # 2  

consensusID : consensus_547#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 867
fasta sequence
                              [ATTATAGCCATTGAATTGAAATCCAGTAATTCCACTTTAGCAACAACTGAGCTTTTCTACATTTTAAACAGGAACAATATAGAGCGAAGAGAACAACGTGGGCATTGGATTTTGCCGATTGAATCATGAGCACATTTGCATAATCAGAAACCGAACGGTGCACCATTTCAGTAACATTGGCACATGGAAAACCCAAATTGCAGCATGCAATTGGAATTTGCACAGGAACAGCAGCACAACGCAGGGGACGCATGCCATTTGCCACCCTGACACCCAAATTTATCTGGGTAACTAGAT-CGCTCC--TCAAG-CCAGTGCA--ACCCATCATAATCC-TCATG-AAAACATGCAACTTAA-CAAGTGCTGACCACTCTGGTGATCT-TCAAATTCTCCGATCCCCATAAACAGTCAATGTAAA-CGCTAAGAAGCGATAGTAG-TTTAGCTTGGTTG-CCAGAT-CAGAACTTGTCCACAACAGTTTCGCTTGGTTG-CCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTG-ATTTGTATGACGCATGCATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGCCTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCCTCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGGTGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTATAACCTTCATCTTTCTAAGGGAAACAAGTTCATTCAAATCTTCTAGTGATGCTAGCCCATCACAGGATTCAATTCTCAATTCCTCCAAAGCTGTGTGGCAACCAGATT]

[+] EMBL CB675818             [ATTATAGCCATTGAATTGAAATCCAGTAATTCCACTTTAGCAACAACTGAGCTTTTCTACATTTTAAACAGGAACAATATAGAGCGAAGAGAACAACGTGGGCATTGGATTTTGCCGATTGAATCATGAGCACATTTGCATAATCAGAAACCGAACGGTGCACCATTTCAGTAACATTGGCACATGGAAAACCCAAATTGCAGCATGCAATTGGAATTTGCACAGGAACAGCAGCACAACGCAGGGGACGCATGCCATTTGCCACCCTGACACCCAAATTTATCTGGGTAACTAGAT CGCTCC  TCAAG CCAGTGCA  ACCCATCATAATCC TCATG AAAACATGCAACTTAA CAAGTGCTGACCACTCTGGTGATCT TCAAATTCTCCGATCCCCATAAACAGTCAATGTAAA CGCTAAGAAGCGATAGTAG TTTAGCTTGGTTG CCAGAT CAGAACTTGTCCACAACAGTTTCGCTTGGTTG CCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTG ATTTGTATGACGCATGCATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGCCTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCCTCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGGTGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTAT                                                                                                           ]
[-] EMBL C91895               [                                                                                                                                                                                                                                                                                                   CTAGATCCGCTCCCTTCAAGCCCANTGCACCCCCCTTCATAANCCTTCATGAAAAACATGCAACTTAACCAAGTGCTGNCCACTCTGGTGATCTCTCAAATTCTCCGATCCCCATAAACAGTCAATGTAAANCGCTAAGAAGCGATANTAGTTTTAGCTTGGTTGCCCAGATCCAGAACTTGTCCACAACAGTTTCGCTTGGTTGCCCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTGAATTTGTATGACGCATGCATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGCCTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCCTCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGGTGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTATAACCTTCATCTTTCTAAGGGAAACAAGTTCATTCAAATCTTCTAGTGATGCTAGCCCATCACAGGATTCAATTCTCAATTCCTCCAAAGCTGTGTGGCAACCAGATT]


>consensus_547#0 ATTATAGCCATTGAATTGAAATCCAGTAATTCCACTTTAGCAACAACTGAGCTTTTCTAC ATTTTAAACAGGAACAATATAGAGCGAAGAGAACAACGTGGGCATTGGATTTTGCCGATT GAATCATGAGCACATTTGCATAATCAGAAACCGAACGGTGCACCATTTCAGTAACATTGG CACATGGAAAACCCAAATTGCAGCATGCAATTGGAATTTGCACAGGAACAGCAGCACAAC GCAGGGGACGCATGCCATTTGCCACCCTGACACCCAAATTTATCTGGGTAACTAGATCGC TCCTCAAGCCAGTGCAACCCATCATAATCCTCATGAAAACATGCAACTTAACAAGTGCTG ACCACTCTGGTGATCTTCAAATTCTCCGATCCCCATAAACAGTCAATGTAAACGCTAAGA AGCGATAGTAGTTTAGCTTGGTTGCCAGATCAGAACTTGTCCACAACAGTTTCGCTTGGT TGCCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTGATTTGTATGACGCATGC ATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGC CTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCC TCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGG TGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTATAACCTTCATCTTTCTAAGGG AAACAAGTTCATTCAAATCTTCTAGTGATGCTAGCCCATCACAGGATTCAATTCTCAATT CCTCCAAAGCTGTGTGGCAACCAGATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)