cluster # 5476

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Oryza sativa
cluster # 5476 cluster # 5476 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5476#0 length = 2457 sequences # 3
consensusID : consensus_5476#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2457
fasta sequence
                              [TTCAACGGGCGAGGTTTTTTGAAACCCCTCCTCCTCCTCCTTCCCCAACACACAATCGAAGCCGCCGCGCCGCAACACCACCCCCAGACGGGCAGCCGCGCGCGCAGGAGGAGGAGAGGAGCTCGCTCCCTTTGCCCTGCCTAGGGTTTCGTGCCACCCCATCTCTCCTTCNCCCACNCCACCCGCTTCNTCGATTCGATCC-ACCGCTTCCCCCCGATCTNGGCGGCGGCGGCTTTGGCGGCGGAGGTGTTGATGAGGCGGTAGATCAATGGGCGCGATGCCGGCGGTGAAGGTGGAGGAGGAGGAGGAGGAGCGGAATCCGGTGGCGTCGAG-CCTTCGGTCTCGGAGGGGAGCGCGCACGCCGCCGCGCTGGCGTCGCCCACCGCGGCGGATTCCATCTTCGGTCGCAGGCGAAAAAGTGGGCCGGTAAGGAGAGCTAAGGGTGGCTGGACACCAGAAGAGGATGAAAAATTGCGGAAGGCAGTTGATATTTATAATGGCAAAAACTGGAAGAAGATAGAAGTACAATGTCTGCATAGATGGCAGAAAGTTCTTGATCCTGAACTATAAAAGGTCCATGGACCCAAGAGGAAGATGATGTCATCATCAATATGGTAAAGAAGCATGGATCAAAAAAATGGTCTGTTATAGCAAGGTCACTAAATGGTCGAATTGGTAAACAATGCCGAGAGAGGTGGCATAATCATTTGGACCCACAAATAAGGAAAGAAGCTTGGACTGTTGAAGAGGAGCGTGTGCTTGCCCGTGCTCATTGTATGTATGGGAATAAATGGGCAGAAATTGCTAAACTTCTTCCTGGAAGGACAGACAATTCTATAAAAAACCATTGGAACAGTTCATTAAGAAAAAAAATAGATGACTACAATACCAGAGATATTCTGCCAGTTCATCCACCAGTTGTTGGTGATGGTTTGAAACAGTTACCAAAGCGGCCACCTGCTGACAACCATTTTGACTTAAACAAAGAGCCAATTATCTGTTCAAGAGACCGCTTAGGAGTAGTTCATTCTGACCCTACCTCTCATCAACGGGCATCCAATTTGAAAGACTTTAAGGGCTGTGCAGATTACCTCTCACTTGGTCAGCCAGTAACTTCATGTGAGGCTTCTGCAGCTGATGATTCTGCTTTTGATCTAGCAACACAGGGAATGAGAATGGATTCTGTTCATGACAAGGGTACTGGGAACAATTTTGTTTGTGGGAAGGTTCAGGGAATCAATTTTCTTGGTGACAAGGGACTTAAAATTAATCAGATATCAGATAAAATGGGCTGTTCAAGACAAGCTAAGAGAGAAGGTGAAGCAGCCATTAATGGCGGCGGATCATCCTTGCAGAGTGAGGCTCACTCTGTTGGTTCTCTTTGTTATCAGATATCTAAGATGGAAGACATTGCTCCTGCCCAATCCCCAGTGTTTACAGCAAATTATGTACCGGAACACTCTAGGAACGTAATGCACTCACCCAATGGCTATACTACTCCACCCACTCATGGAAAAGGATCAGATCAGCTTAGTGTTGAATCCATATTGAGAAGTGCTGCTGAAAAATTCCATGGTACTCCCTCAATACTAAGAAGAAGAAAAAGAGATAAACCGACGCCTGCTGAAGATAATGATTTGAAGATTGGCAGATTAAGCAGTGATGACTTCCACACTCCCATAGGAAAGTGTACTACAGATAGCCCACAGTCATTCAAAACTGCAGCACTTTTGTCCTTGGGTCCTATGGATGAGCAAGGGAGTCTTGATGTTTCCCCTCCATATCGACTAAGGTCAAAAAGATTGGCTGTCCTGAAAACTGTTCAAAATCATCTGGATTTTTCATCTGATGAAATGAGCATTTGTGATACTACAATGAAATCTGCCTGCGGGAATTCTGATTGTGCTAATGCCAGTAGTGGTGTTTCAAGCATTCAAGGGAAGAAACTGGATGAGCATATGATTGGATTGGAAACTTTAACCATGAACTTTGCGCATACGACAAAGTTGGATGCTACCCAACCTAATTTGTAGCATTCAGAAACAGCTAGCGATGTGCTGAAGTGGGCGAGGAGACCTGATGCGTCTAAATTTAATGTTGTCACTCTTCCTAAAGGCAAATAGGAAACACATTTTCTTTTTTTTGCAGTTCGTTTGAATTACCAAGGTACAGGAGAGTCACCATTTACCAACCCTACCATCTCTCCTTGGTGGGCTGTACAAAGCCATCTCCATTTTCGACAGAAAATATGTTGCTACTGTAAGCTCACAGTTAGCAATTCAATTTTTAAAGGCTCACAACTCACATCTGTGTAGAAAGAACAATCAGTTATAGAAACTTATCAAAGTTTTTCCTTTTTTTGAACTGCAGAAACATTTAAAAAGTTTATCAAGATTCCACATACTTTTTTTTCCTTTATATCATCGTGGACTCTTATGAGCCTTGAAATGAGATGAT]

[+] EMBL AU070248             [TTCAACGGGCGAGGTTTTTTGAAACCCCTCCTCCTCCTCCTTCCCCAACACACAATCGAAGCCGCCGCGCCGCAACACCACCCCCAGACGGGCAGCCGCGCGCGCAGGAGGAGGAGAGGAGCTCGCTCCCTTTGCCCTGCCTAGGGTTTCGTGCCACCCCATCTCTCCTTCNCCCACNCCACCCGCTTCNTCGATTCGATCCNACCGCTTCCCCCCGATCTNGGCGGCGGCGGCTTTGGCGGCGGAGGTGTTGATGAGGCGGTAGATCAATGGGCGCGATGCCGGCGGTGAAGGTGGAGGAGGAGGAGGAGGAGCGGAATCCGGTGGCGTCGAG CCTTCGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK106756             [                                                              CGCCGCGCCGCAACACCACCCCCAGACGGGCAGCCGCGCGCGCAGGAGGAGGAGAGGAGCTCGCTCCCTTTGCCCTGCCTAGGGTTTCGTGCCACCCCATCTCTCCTTCCCCCACCCCACCCGCTTCCTCGATTCGATCC TCCGCTTCCCCCCGATCTGGGCGGCGGCGGCTTTGGCGGCGGAGGTGTTGATGAGGCGGTAGATCAATGGGCGCGATGCCGGCGGTGAAGGTGGAGGAGGAGGAGGAGGAGCGGAATCCGGTGGCGTCGAGCCCTTCGGTCTCGGAGGGGAGCGCGCACGCCGCCGCGCTGGCGTCGCCCACCGCGGCGGATTCCATCTTCGGTCGCAGGCGAAAAAGTGGGCCGGTAAGGAGAGCTAAGGGTGGCTGGACACCAGAAGAGGATGAAAAATTGCGGAAGGCAGTTGATATTTATAATGGCAAAAACTGGAAGAAGATAGAAGTACAATGTCTGCATAGATGGCAGAAAGTTCTTGATCCTGAACTATAAAAGGTCCATGGACCCAAGAGGAAGATGATGTCATCATCAATATGGTAAAGAAGCATGGATCAAAAAAATGGTCTGTTATAGCAAGGTCACTAAATGGTCGAATTGGTAAACAATGCCGAGAGAGGTGGCATAATCATTTGGACCCACAAATAAGGAAAGAAGCTTGGACTGTTGAAGAGGAGCGTGTGCTTGCCCGTGCTCATTGTATGTATGGGAATAAATGGGCAGAAATTGCTAAACTTCTTCCTGGAAGGACAGACAATTCTATAAAAAACCATTGGAACAGTTCATTAAGAAAAAAAATAGATGACTACAATACCAGAGATATTCTGCCAGTTCATCCACCAGTTGTTGGTGATGGTTTGAAACAGTTACCAAAGCGGCCACCTGCTGACAACCATTTTGACTTAAACAAAGAGCCAATTATCTGTTCAAGAGACCGCTTAGGAGTAGTTCATTCTGACCCTACCTCTCATCAACGGGCATCCAATTTGAAAGACTTTAAGGGCTGTGCAGATTACCTCTCACTTGGTCAGCCAGTAACTTCATGTGAGGCTTCTGCAGCTGATGATTCTGCTTTTGATCTAGCAACACAGGGAATGAGAATGGATTCTGTTCATGACAAGGGTACTGGGAACAATTTTGTTTGTGGGAAGGTTCAGGGAATCAATTTTCTTGGTGACAAGGGACTTAAAATTAATCAGATATCAGATAAAATGGGCTGTTCAAGACAAGCTAAGAGAGAAGGTGAAGCAGCCATTAATGGCGGCGGATCATCCTTGCAGAGTGAGGCTCACTCTGTTGGTTCTCTTTGTTATCAGATATCTAAGATGGAAGACATTGCTCCTGCCCAATCCCCAGTGTTTACAGCAAATTATGTACCGGAACACTCTAGGAACGTAATGCACTCACCCAATGGCTATACTACTCCACCCACTCATGGAAAAGGATCAGATCAGCTTAGTGTTGAATCCATATTGAGAAGTGCTGCTGAAAAATTCCATGGTACTCCCTCAATACTAAGAAGAAGAAAAAGAGATAAACCGACGCCTGCTGAAGATAATGATTTGAAGATTGGCAGATTAAGCAGTGATGACTTCCACACTCCCATAGGAAAGTGTACTACAGATAGCCCACAGTCATTCAAAACTGCAGCACTTTTGTCCTTGGGTCCTATGGATGAGCAAGGGAGTCTTGATGTTTCCCCTCCATATCGACTAAGGTCAAAAAGATTGGCTGTCCTGAAAACTGTTCAAAATCATCTGGATTTTTCATCTGATGAAATGAGCATTTGTGATACTACAATGAAATCTGCCTGCGGGAATTCTGATTGTGCTAATGCCAGTAGTGGTGTTTCAAGCATTCAAGGGAAGAAACTGGATGAGCATATGATTGGATTGGAAACTTTAACCATGAACTTTGCGCATACGACAAAGTTGGATGCTACCCAACCTAATTTGTAGCATTCAGAAACAGCTAGCGATGTGCTGAAGTGGGCGAGGAGACCTGATGCGTCTAAATTTAATGTTGTCACTCTTCCTAAAGGCAAATAGGAAACACATTTTCTTTTTTTTGCAGTTCGTTTGAATTACCAAGGTACAGGAGAGTCACCATTTACCAACCCTACCATCTCTCCTTGGTGGGCTGTACAAAGCCATCTCCATTTTCGACAGAAAATATGTTGCTACTGTAAGCTCACAGTTAGCAATTCAATTTTTAAAGGCTCACAACTCACATCTGTGTAGAAAGAACAATCAGTTATAGAAACTTATCAAAGTTTTTCCTTTTTTTGAACTGCAGAAACATTTAAAAAGTTTATCAAGATTCCACATACTTTTTTTTCCTTTATATCATCGTGGACTCTTATGAGCCTTGAAATGAGATGAT]
[+] EMBL CA763804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGTTTGTGGGAAGGTTCAGGGAATCAATTTTCTTGGTGACAAGGGACTTAAAATTAATCAGATATCAGATAAAATGGGCTGTTCAAGACAAGCTAAGAGAGAAGGTGAAGCAGCCATTAATGGCGGCGGATCATCCTTGCAGAGTGAGGCTCACTCTGTTGGTTCTCTTTGTTATCAGATACCTAAGATGGAAGACATTGCTCCTGCCCAATCCCCAGTGTTTACAGCAAATTATGTACCGGAACACTCTAGGAACGTAATGCACTCACCCAATGGCTATACTACTCCACCCACTCATGGAAAAGGATCAGATCAGCTTAGTGTTGAATCCATATTGAGAAGTGCTGCTGAAAAATTCCATGGTACTCCCTCAATACTAAGAAGAAGAAAAAGAGATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_5476#0
TTCAACGGGCGAGGTTTTTTGAAACCCCTCCTCCTCCTCCTTCCCCAACACACAATCGAA
GCCGCCGCGCCGCAACACCACCCCCAGACGGGCAGCCGCGCGCGCAGGAGGAGGAGAGGA
GCTCGCTCCCTTTGCCCTGCCTAGGGTTTCGTGCCACCCCATCTCTCCTTCNCCCACNCC
ACCCGCTTCNTCGATTCGATCCACCGCTTCCCCCCGATCTNGGCGGCGGCGGCTTTGGCG
GCGGAGGTGTTGATGAGGCGGTAGATCAATGGGCGCGATGCCGGCGGTGAAGGTGGAGGA
GGAGGAGGAGGAGCGGAATCCGGTGGCGTCGAGCCTTCGGTCTCGGAGGGGAGCGCGCAC
GCCGCCGCGCTGGCGTCGCCCACCGCGGCGGATTCCATCTTCGGTCGCAGGCGAAAAAGT
GGGCCGGTAAGGAGAGCTAAGGGTGGCTGGACACCAGAAGAGGATGAAAAATTGCGGAAG
GCAGTTGATATTTATAATGGCAAAAACTGGAAGAAGATAGAAGTACAATGTCTGCATAGA
TGGCAGAAAGTTCTTGATCCTGAACTATAAAAGGTCCATGGACCCAAGAGGAAGATGATG
TCATCATCAATATGGTAAAGAAGCATGGATCAAAAAAATGGTCTGTTATAGCAAGGTCAC
TAAATGGTCGAATTGGTAAACAATGCCGAGAGAGGTGGCATAATCATTTGGACCCACAAA
TAAGGAAAGAAGCTTGGACTGTTGAAGAGGAGCGTGTGCTTGCCCGTGCTCATTGTATGT
ATGGGAATAAATGGGCAGAAATTGCTAAACTTCTTCCTGGAAGGACAGACAATTCTATAA
AAAACCATTGGAACAGTTCATTAAGAAAAAAAATAGATGACTACAATACCAGAGATATTC
TGCCAGTTCATCCACCAGTTGTTGGTGATGGTTTGAAACAGTTACCAAAGCGGCCACCTG
CTGACAACCATTTTGACTTAAACAAAGAGCCAATTATCTGTTCAAGAGACCGCTTAGGAG
TAGTTCATTCTGACCCTACCTCTCATCAACGGGCATCCAATTTGAAAGACTTTAAGGGCT
GTGCAGATTACCTCTCACTTGGTCAGCCAGTAACTTCATGTGAGGCTTCTGCAGCTGATG
ATTCTGCTTTTGATCTAGCAACACAGGGAATGAGAATGGATTCTGTTCATGACAAGGGTA
CTGGGAACAATTTTGTTTGTGGGAAGGTTCAGGGAATCAATTTTCTTGGTGACAAGGGAC
TTAAAATTAATCAGATATCAGATAAAATGGGCTGTTCAAGACAAGCTAAGAGAGAAGGTG
AAGCAGCCATTAATGGCGGCGGATCATCCTTGCAGAGTGAGGCTCACTCTGTTGGTTCTC
TTTGTTATCAGATATCTAAGATGGAAGACATTGCTCCTGCCCAATCCCCAGTGTTTACAG
CAAATTATGTACCGGAACACTCTAGGAACGTAATGCACTCACCCAATGGCTATACTACTC
CACCCACTCATGGAAAAGGATCAGATCAGCTTAGTGTTGAATCCATATTGAGAAGTGCTG
CTGAAAAATTCCATGGTACTCCCTCAATACTAAGAAGAAGAAAAAGAGATAAACCGACGC
CTGCTGAAGATAATGATTTGAAGATTGGCAGATTAAGCAGTGATGACTTCCACACTCCCA
TAGGAAAGTGTACTACAGATAGCCCACAGTCATTCAAAACTGCAGCACTTTTGTCCTTGG
GTCCTATGGATGAGCAAGGGAGTCTTGATGTTTCCCCTCCATATCGACTAAGGTCAAAAA
GATTGGCTGTCCTGAAAACTGTTCAAAATCATCTGGATTTTTCATCTGATGAAATGAGCA
TTTGTGATACTACAATGAAATCTGCCTGCGGGAATTCTGATTGTGCTAATGCCAGTAGTG
GTGTTTCAAGCATTCAAGGGAAGAAACTGGATGAGCATATGATTGGATTGGAAACTTTAA
CCATGAACTTTGCGCATACGACAAAGTTGGATGCTACCCAACCTAATTTGTAGCATTCAG
AAACAGCTAGCGATGTGCTGAAGTGGGCGAGGAGACCTGATGCGTCTAAATTTAATGTTG
TCACTCTTCCTAAAGGCAAATAGGAAACACATTTTCTTTTTTTTGCAGTTCGTTTGAATT
ACCAAGGTACAGGAGAGTCACCATTTACCAACCCTACCATCTCTCCTTGGTGGGCTGTAC
AAAGCCATCTCCATTTTCGACAGAAAATATGTTGCTACTGTAAGCTCACAGTTAGCAATT
CAATTTTTAAAGGCTCACAACTCACATCTGTGTAGAAAGAACAATCAGTTATAGAAACTT
ATCAAAGTTTTTCCTTTTTTTGAACTGCAGAAACATTTAAAAAGTTTATCAAGATTCCAC
ATACTTTTTTTTCCTTTATATCATCGTGGACTCTTATGAGCCTTGAAATGAGATGAT
clustalw multiple alignements is not computed in this case