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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5478 cluster # 5478       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5478#0 length = 681 sequences # 3  

consensusID : consensus_5478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 681
fasta sequence
                              [TTTTCTCTCGTCTCCNCCCCCCTTTCCTTCTCTCGCAAGCCGCGG-CG-ATGGCGGCCGTGACCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCCACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCNGCGGCGGCGGCG-NGGTAGAGGCTGCGGCTGCGGGGGCGTCCGANGCCTCGGCCGCTG-CGCGGCTGGCGCGGGGGAGCAGCCGGCGCCG-CGCCGAAGCGGTGGGGCCTGC-TGAA-GTTTGGCGCCTTCGCGGCGGTGTNCGGGGCTCTCGGCGCCGCCGGGTACTCCAGCTACGCTTATACGCTTGAGGAGGTGGATCAGAAGACGCGGGAGTTCAGGAAGGCCATGACTACGCCGCGCCCCGTTGCGGAGGACGCCTCTGAATTTGAGGTAGTGTCATCTTAAGATATTCGGGGTACCAACTCCATGTATAAAGGAGTGATGGTTGCTTATTAATCCTATGATGCGATATTGTAACTTTGTAANAGTGTAACNCCGGGGTATGGGAAGGAGGGTTCTATTGGCACCTGAGCTGGGAATTTAAGTATTTTACCCTGAATATATTATTGTCAGCTCAGTTTGTTGTAATGCATGAAAGTAATATATCAAAAGTAAGGTCCCGAAGCAATTGCTAAAAAAAAAAAAAAAA]

[-] EMBL AU091943             [TTTTCTCTCGTCTCCNCCCCCCTTTCCTTCTCTCGCAAGCCGCGG CG ATGGCGGCCGTGACCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCCACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCNGCGGCGGCGGCG NGGTAGAGGCTGCGGCTGCGGGGGCGTCCGANGCCTCGGCCGCTG CGCGGCTGGCGCGGGGGAGCAGCCGGCGCCG CGCCGAAGCGGTGGGGCCTTCTTGAANTTTTGGCGCCTTCGCGGCGGTGTNCGG                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU108187             [                               ngncanAGCCGCGGTNGAATGGCGGCCGTGACCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCCACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCGGCGGCGGCGGCGCNGTTAGAGGCTGCGGCTGCGGGGGCGTCCGACGCCTCGGCCGCTGCCGCGGCTGGCGCGGGGGAGCAGCCGGCGCCGCCGCCGAAGCGGTGGGGCCTGC TGAA GTTTGGCGCCTTCGCGGCGGTGTNCGGGGCTCTCGGCGCCGCC                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU172781             [                                                                                                                                                                                                                                                                         CTGC TGAA GTTTGGCGCCTTCGCGGCGGTGTGCGGGGCTCTCGGCGCCGCCGGGTACTCCAGCTACGCTTATACGCTTGAGGAGGTGGATCAGAAGACGCGGGAGTTCAGGAAGGCCATGACTACGCCGCGCCCCGTTGCGGAGGACGCCTCTGAATTTGAGGTAGTGTCATCTTAAGATATTCGGGGTACCAACTCCATGTATAAAGGAGTGATGGTTGCTTATTAATCCTATGATGCGATATTGTAACTTTGTAANAGTGTAACNCCGGGGTATGGGAAGGAGGGTTCTATTGGCACCTGAGCTGGGAATTTAAGTATTTTACCCTGAATATATTATTGTCAGCTCAGTTTGTTGTAATGCATGAAAGTAATATATCAAAAGTAAGGTCCCGAAGCAATTGCTAAAAAAAAAAAAAAAA]


>consensus_5478#0 TTTTCTCTCGTCTCCNCCCCCCTTTCCTTCTCTCGCAAGCCGCGGCGATGGCGGCCGTGA CCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCC ACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCNGCGGCGGCGGCGNGGTAGAGGCTGC GGCTGCGGGGGCGTCCGANGCCTCGGCCGCTGCGCGGCTGGCGCGGGGGAGCAGCCGGCG CCGCGCCGAAGCGGTGGGGCCTGCTGAAGTTTGGCGCCTTCGCGGCGGTGTNCGGGGCTC TCGGCGCCGCCGGGTACTCCAGCTACGCTTATACGCTTGAGGAGGTGGATCAGAAGACGC GGGAGTTCAGGAAGGCCATGACTACGCCGCGCCCCGTTGCGGAGGACGCCTCTGAATTTG AGGTAGTGTCATCTTAAGATATTCGGGGTACCAACTCCATGTATAAAGGAGTGATGGTTG CTTATTAATCCTATGATGCGATATTGTAACTTTGTAANAGTGTAACNCCGGGGTATGGGA AGGAGGGTTCTATTGGCACCTGAGCTGGGAATTTAAGTATTTTACCCTGAATATATTATT GTCAGCTCAGTTTGTTGTAATGCATGAAAGTAATATATCAAAAGTAAGGTCCCGAAGCAA TTGCTAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)