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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5487 cluster # 5487       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5487#0 length = 842 sequences # 3  

consensusID : consensus_5487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 842
fasta sequence
                              [TTTTTTCTTTTTTTTTATAGTAATTATGTCTACAATTTATTTCATTCCAAAACTAAGCATACACATGCTAAATCATCATTCTCAAATCAATTTCGTAATATTTCAATCCAAATCATTTTGTCATTTCTCCAATATCTATCATATTTCCCGCAACAAAGCATGCGGTTACTTGTAGCTTCAAATGGTCTCACACAGTCCATCATGACAAAGCCGTCACTCGCCCTTCACCACCGGATTTTGTTCTTCGCGCCAAGCCCCTTGCTTGCCCTTCACCACCGCATGGTCCATCGTGACCGAGCATCGCTTGCCCTTCACCGTCTTGCCATAGTAGCCACTTCGTATCCCACATCTTCAATATCTTCACTTTGTCATCCTTGGTATCTTTAGGTGTAGTGATATCACTTGAGCATCAATACCTTTGCAATCCTTGGGGCCTATTTCTCTCATTCAACTCAATGAAATTATTAATCTCAATGATCCGGTTGTCAACCTCCACATGTTGACTAACCAATCGCATGTATAAAAGGATATGAATAAATGATGGGTATTAATCAACACCATAAGTGTCATATACTCAAATATATGCTCACATGTAAAAATCCCAATTAAATAAAAGTGAATAACTTGGATCAAGTACATGCATAACCAAGATATAGGATTTGCTCGCAAGACTATGCATAACAAAGATATGAAACATTGAGAGCTTATCCTATACAAGAATAGAAGGCATTTCTCAAATATGGATATTAAAATAAAAACACACCTTCATCATCTTCATGTTCTCAATGTAAATAGACTAAATAAGAGATAAGAATCNCACAAGACATTAGTCTCACACATGC]

[+] EMBL CB635942             [TTTTTTCTTTTTTTTTATAGTAATTATGTCTACAATTTATTTCATTCCAAAACTAAGCATACACATGCTAAATCATCATTCTCAAATCAATTTCGTAATATTTCAATCCAAATCATTTTGTCATTTCTCCAATATCTATCATATTTCCCACAACAAAGCATGCGGTTACTTGTAGCTTCAAATGGTCTCACACAGTCCATCATGACAAAGTCGTCACTCGCCCTTCACCACCGGATTTTGTTCTTCGCGCCAAGCCCCTTGCTTGCCCTTCACCACCGCATGGTCCATCGTGACCGAGCATCGCTTGCCCTTCACCATCTTGCCATAGTAGCCACTTCGTATCCCACATCTTCAATATCTTCACTTTGTCATCATTGGTATCTTTAGGTGTAGTGATATCACTTGAGCATCAATACCTTTGCAATCCTTGGGGCCTATTTCTCTCATTCAACTCAATGAAATTATTAGTCTCAATGATCCGGTTGTCAACCTCCACATGTTGACTAACCAATCGCATGTATAAAAGGATATGAATAAATGATGGGTATTAATCAATACCACAAGTGTCATATACTCAAATATATGCTCACATGTAAAAATCCCAATTAAATAAAAGTGAATAACTTGGATCAAGTACATGCATAACCAAGATATAGGATTTGCTCGCAAGACTATGCATAAC AAGATATGAAACATTGAGAGCTTATCCTATACAAGAATAGAAGGCATTTCTCAAATATGGATATTAAAATAAAAACACACCTTCATCATCTTCATGTTCTCAATGTAAATAGAC                                             ]
[+] EMBL CB676576             [                                                              cCATGCTAAATCATCATTCTCAAATCAATTTCCTAATATTTCAATCCAAATCATTTTGTCATTTCTCCAATATCTATCATATTTCCCGCAACAAAGCATGCGGTTACTTGTAGCTTCAAATGGTCTCACACAGTCCATCATGACAAAGCCGTCACTCGCCCTTCACCACCGGATTTTGTTCTTCGCGCCAAGCCCCTTGCTTGCCCTTCACCACCGCATGGTCCATCGTGACCGAGCATCGCTTGCCCTTCACCGTCTTGCCATAGTAGCCACTTCGTATCCCACATCTTCAATATCTTCACTTTGTCATCCTTGGTATCTTTAGGTGTAGTGATATCACTTGAGCATCAATACCTTTGCAATCCTTGGGGCCTATTTCTCTCATTCAACTCAATGAAATTATTAATCTCAATGATCCGGTTGTCAACCTCCACATGTTGACTAACCAATCGCATGTATAAAAGGATATGAATAAATGATGGGTATTAATCAACACCATAAGTGTCATATACTCAAATATATGCTCACATGTAAAAATCCCAATTAAATAAAAGTGAATAACTTGGATCAAGTACATGCATAACCAAGATATAGGATTTGCTCGCAAGACTATGCATAACAAAGATATGAAACATTGAGAGCTTATCCTATACAAGAATAGAAGGCATTTCTCAAATATGGATATTAAAATAAAAACACACCTTCATCATCTTCATGTTCTCAATGTAna                                                  ]
[+] EMBL CB676578             [                                                                     AAATCATCATTCTCAAATCAATTTCGTAATATTTCAATCCAAATCATTTTGTCATTTCTCCAATATCTATCATATTTCCCGCAACAAAGCATGCGGTTACTTGTAGCTTCAAATGGTCTCACACAGTCCATCATGACAAAGCCGTCACTCGCCCTTCACCACCGGATTTTGTTCTTCGCGCCAAGCCCCTTGCTTGCCCTTCACCACCGCATGGTCCATCGTGACCGAGCATCGCTTGCCCTTCACCGTCTTGCCATAGTAGCCACTTCGTATCCCACATCTTCAATATCTTCACTTTGTCATCCTTGGTATCTTTAGGTGTAGTGATATCACTTGAGCATCAATACCTTTGCAATCCTTGGGGCCTATTTCTCTCATTCAACTCAATGAAATTATTAATCTCAATGATCCGGTTGTCAACCTCCACATGTTGACTAACCAATCGCATGTATAAAAGGATATGAATAAATGATGGGTATTAATCAACACCATAAGTGTCATATACTCAAATATATGCTCACATGTAAAAATCCCAATTAAATAAAAGTGAATAACTTGGATCAAGTACATGCATAACCAAGATATAGGATTTGCTCGCAAGACTATGCATAACAAAGATATGAAACATTGAGAGCTTATCCTATACAAGAATAGAAGGCATTTCTCAAATATGGATATTAAAATAAAAACACACCTTCATCATCTTCATGTTCTCAATGTAAATAGACTAAATAAGAGATAAGAATCNCACAAGACATTAGTCTCACACATGC]


>consensus_5487#0 TTTTTTCTTTTTTTTTATAGTAATTATGTCTACAATTTATTTCATTCCAAAACTAAGCAT ACACATGCTAAATCATCATTCTCAAATCAATTTCGTAATATTTCAATCCAAATCATTTTG TCATTTCTCCAATATCTATCATATTTCCCGCAACAAAGCATGCGGTTACTTGTAGCTTCA AATGGTCTCACACAGTCCATCATGACAAAGCCGTCACTCGCCCTTCACCACCGGATTTTG TTCTTCGCGCCAAGCCCCTTGCTTGCCCTTCACCACCGCATGGTCCATCGTGACCGAGCA TCGCTTGCCCTTCACCGTCTTGCCATAGTAGCCACTTCGTATCCCACATCTTCAATATCT TCACTTTGTCATCCTTGGTATCTTTAGGTGTAGTGATATCACTTGAGCATCAATACCTTT GCAATCCTTGGGGCCTATTTCTCTCATTCAACTCAATGAAATTATTAATCTCAATGATCC GGTTGTCAACCTCCACATGTTGACTAACCAATCGCATGTATAAAAGGATATGAATAAATG ATGGGTATTAATCAACACCATAAGTGTCATATACTCAAATATATGCTCACATGTAAAAAT CCCAATTAAATAAAAGTGAATAACTTGGATCAAGTACATGCATAACCAAGATATAGGATT TGCTCGCAAGACTATGCATAACAAAGATATGAAACATTGAGAGCTTATCCTATACAAGAA TAGAAGGCATTTCTCAAATATGGATATTAAAATAAAAACACACCTTCATCATCTTCATGT TCTCAATGTAAATAGACTAAATAAGAGATAAGAATCNCACAAGACATTAGTCTCACACAT GC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)