cluster # 5503

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Oryza sativa
cluster # 5503 cluster # 5503 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5503#0 length = 844 sequences # 3

consensusID : consensus_5503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 844
fasta sequence

                              [CTCTTCGCTTCCAAATTCGCGCCGCTGATCCCCCGGCTCCGCCGCCTCTCCACCGCGGCGGCGGCGGCGACGGCGACGGCCGCCGGGGAGGACCCGAAGCTGTCGCGCATAGCGGACCAGCTCCTGGAACTCTCCCCTGCCGAGCTCGACGACTACTCGGCGCTCCTGCGGCTCAAGCTCCGCCTCTCGCTCACGTCGAGCGCCGCATCGGGGGCCGCGGCCACTGGCGCGGCCGGAGACGCCGCCTCCGGCTCCGCCGGCGCGGAGGAGGCCGCGGCGGTGAAGACGTCGTTCGATGTCAAGATCGAGAAGTACGAGGCGGCGGCGAAGATAAAGATCATCAAGGAGGTGCGCGCGGTGACGGACCTGGGGCTGAAGGAGGCGAAGGAGCTCGTGGAGAAGGCGCCGGTCGTGGTGCGATCCGGGCTTCCCAAGGAGGAGGCCGAGGCGCTCGCCGCCAAGCTCAAGGCCGCCGGCGCCGCCGTCGCGCTCGAGTGATCCCGAGCGGAAGAACGGGTTCGCCCTTTTTATTTTTGGTTCCTACTGTTATCCTTAGATCGAAG-ATGCTACGCTTGTGGGTGCCTTGGTTTGTTTGGATTGAAATTCGATGCAATTGGGGCAATTGATCAGGTGTATAAGAAGATGCAGGTCTTGATTGCATTGTTGTAGCTTGCCTAGTTACTGATTTATCTTGTTGAATCACGCAATAATGTCTATTTTAGTGGTCTGGGATCACTGGATGGTATATCTGATTAGCTGAATTGACTTGTCTGGGGGGGCTTACAGAGATACAATTGTAGTTGGCTCTACTGTATCGAGTGATTCGCATATGGTTAGCTTCAGT]

[+] EMBL AK062899             [CTCTTCGCTTCCAAATTCGCGCCGCTGATCCCCCGGCTCCGCCGCCTCTCCACCGCGGCGGCGGCGGCGACGGCGACGGCCGCCGGGGAGGACCCGAAGCTGTCGCGCATAGCGGACCAGCTCCTGGAACTCTCCCCTGCCGAGCTCGACGACTACTCGGCGCTCCTGCGGCTCAAGCTCCGCCTCTCGCTCACGTCGAGCGCCGCATCGGGGGCCGCGGCCACTGGCGCGGCCGGAGACGCCGCCTCCGGCTCCGCCGGCGCGGAGGAGGCCGCGGCGGTGAAGACGTCGTTCGATGTCAAGATCGAGAAGTACGAGGCGGCGGCGAAGATAAAGATCATCAAGGAGGTGCGCGCGGTGACGGACCTGGGGCTGAAGGAGGCGAAGGAGCTCGTGGAGAAGGCGCCGGTCGTGGTGCGATCCGGGCTTCCCAAGGAGGAGGCCGAGGCGCTCGCCGCCAAGCTCAAGGCCGCCGGCGCCGCCGTCGCGCTCGAGTGATCCCGAGCGGAAGAACGGGTTCGCCCTTTTTATTTTTGGTTCCTACTGTTATCCTTAGATCGAAG ATGCTACGCTTGTGGGTGCCTTGGTTTGTTTGGATTGAAATTCGATGCAATTGGGGCAATTGATCAGGTGTATAAGAAGATGCAGGTCTTGATTGCATTGTTGTAGCTTGCCTAGTTACTGATTTATCTTGTTGAATCACGCAATAATGTCTATTTTAGTGGTCTGGGATCACTGGATGGTATATCTGATTAGCTGAATTGACTTGTCTGGGGGGGCTTACAGAGATACAATTGTAGTTGGCTCTACTGTATCGAGTGATTCGCATATGGTTAGCTTCAGT]
[+] EMBL AU172964             [                                         CCGCCTCTCCACCGCGGCGGCGGCGGCGACGGCGACGGCCGCCGGGGAGGACCCGAAGCTGTCGCGCATAGCGGACCAGCTCCTGGAACTCTCCCCTGCCGAGCTCGACGACTACTCGGCGCTCCTGCGGCTCAAGCTCCGCCTCTCGCTCACGTCGAGCGCCGCATCGGGGGCCGCGGCCACTGGCGCGGCCGGAGACGCCGCCTCCGGCTCCGCCGGCGCGGAGGAGGCCGCGGCGGTGAAGACGTCGTTCGATGTCAAGATCGAGAAGTACGAGGCGGCGGCGAAGATAAAGATCATCAAGGAGGTGCGCGCGGTGACGGACCTGGGGCTGAAGGAGGCGAAGGAGCTCGTGGAGAAGGCGCCGGTCGTGGTGCGATCCGGGCTTCCCAAGGAGGAGGCCGAGGCGCTCGCCGCCAAGCTCAAGGCC                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU058363             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTATTTTTGGTTCCTACTGTTATCCTTAGATCGAAGTAT NTACGCTTGTGGGTGCCTTGGTTTGTTTGGATTGANATTCGATGCAATTGGGGCAATTGATCAGGTGTNTAAGAAGATGCAGGTCTTGATTNCATTGTTGTAGCTTGCCTANTTACTGATTTATCTTGTTGAATCACGCAATAATGTCTATTTTAGTGGTCTGGGNTCNCTGGNTGGTnaaaan                                                                                              ]




>consensus_5503#0
CTCTTCGCTTCCAAATTCGCGCCGCTGATCCCCCGGCTCCGCCGCCTCTCCACCGCGGCG
GCGGCGGCGACGGCGACGGCCGCCGGGGAGGACCCGAAGCTGTCGCGCATAGCGGACCAG
CTCCTGGAACTCTCCCCTGCCGAGCTCGACGACTACTCGGCGCTCCTGCGGCTCAAGCTC
CGCCTCTCGCTCACGTCGAGCGCCGCATCGGGGGCCGCGGCCACTGGCGCGGCCGGAGAC
GCCGCCTCCGGCTCCGCCGGCGCGGAGGAGGCCGCGGCGGTGAAGACGTCGTTCGATGTC
AAGATCGAGAAGTACGAGGCGGCGGCGAAGATAAAGATCATCAAGGAGGTGCGCGCGGTG
ACGGACCTGGGGCTGAAGGAGGCGAAGGAGCTCGTGGAGAAGGCGCCGGTCGTGGTGCGA
TCCGGGCTTCCCAAGGAGGAGGCCGAGGCGCTCGCCGCCAAGCTCAAGGCCGCCGGCGCC
GCCGTCGCGCTCGAGTGATCCCGAGCGGAAGAACGGGTTCGCCCTTTTTATTTTTGGTTC
CTACTGTTATCCTTAGATCGAAGATGCTACGCTTGTGGGTGCCTTGGTTTGTTTGGATTG
AAATTCGATGCAATTGGGGCAATTGATCAGGTGTATAAGAAGATGCAGGTCTTGATTGCA
TTGTTGTAGCTTGCCTAGTTACTGATTTATCTTGTTGAATCACGCAATAATGTCTATTTT
AGTGGTCTGGGATCACTGGATGGTATATCTGATTAGCTGAATTGACTTGTCTGGGGGGGC
TTACAGAGATACAATTGTAGTTGGCTCTACTGTATCGAGTGATTCGCATATGGTTAGCTT
CAGT

clustalw multiple alignements is not computed in this case