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Oryza sativa
cluster # 5508 cluster # 5508       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5508#0 length = 822 sequences # 3  

consensusID : consensus_5508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 822
fasta sequence
                              [TGGGGCGCCTTGGAGCTCTCGCGGCGGCCATTGGAGAGGGAGGGGGGAGGCGCAAACCCTAGCTGCCACCGTCCCTGAGGCCTCGCCATGGAGGTGGACCCGCCGCCGCCTCCGCCGCCGCCGATGGCGAACTACTTCGACCCGGAGTCGTCCGGCCGCCGGGAGGAGTACCGCCGCTACAGAAAGAGATTATCTTCTTCAAATGCCTCTCCACTGTTGGGTACTGCGGTCTCCAAATTTTCAGAAGCAAGGCTGTTCTGTGATGGAAACAGCATACAGAGGCGGCCCAATGCTGGTCTACTCCTTGAAGATATCAAGCAGGAGGCTGCTGATATTTCTGATTTTGATAGCCTGGATGAATCTAAGCTGTTTGGATCAGGAAAAAAAAGGGCATCATTGGATGCCTCAGATGCAGGTTTCAGTTCAGGTAGGCAGGCAGTGCGGTCGGCATTGAAATCAGTCAAACTGGAGGAGGATATGCCACATGAAGGAGAAACAACTTCTACAATTTTTGCATCCCTCCTTGATTCTGCAATCCAAGGATTGATGCCCTTCTCGGATGTGATTTTACAATTTGAGAGGACATGTCGAAATGCTTCAGAGTCGATAAGGTCCGCTGGGACAGGAAAGCTTCGGATGGTGGAGGATAGACTTATGCAGCAAAAAGCGCAATTGTTACTGGATGAGGCTGCTTCTTGGTCACTTCTTTGGTACCTCTATGGGAAAGGAAATGACGAGCTTCCTGGAGAGCTATTTGTGGCACCGACTACTTCCCATCAAGAAGCTTGCCGCTTTGTTGTAACAGACCTTACGGCACAGTTA]

[+] EMBL CB632734             [TGGGGCGCCTTGGAGCTCTCGCGGCGGCCATTGGAGAGGGAGGGGGGAGGCGCAAACCCTAGCTGCCACCGTCCCTGAGGCCTCGCCATGGAGGTGGACCCGCCGCCGCCTCCGCCGCCGCCGATGGCGAACTACTTCGACCCGGAGTCGTCCGGCCGCCGGGAGGAGTACCGCCGCTACAGAAAGAGATTATCTTCTTCAAATGCCTCTCCACTGTTGGGTACTGCGGTCTCCAAATTTTCAGAAGCAAGGCTGTTCTGTGATGGAAACAGCATACAGAGGCGGCCCAATGCTGGTCTACTCCTTGAAGATATCAAGCAGGAGGCTGCTGATATTTCTGATTTTGATAGCCTGGATGAATCTAAGCTGTTTGGATCAGGAAAAAAAAGGGCATCATTGGATGCCTCAGATGCAGGTTTCAGTTCAGGTAGGCAGGCAGTGCGGTCGGCATTGAAATCAGTCAAACTGGAGGAGGATATGCCACATGAAGGAGAAACAACTTCTACAATTTTTGCATCCCTCCTTGATTCTGCAATCCAAGGATTGATGCCCTTCTCGGATGTGATTTTACAATTTGAGAGGACATGTCGAAATGCTTCAGAGTCGATAAGGTCCGCTGGGACAGGAAAGCTTCGGATGGTGGAGGATAGACTTATGCAGCAAAAAGCGCAATTGTTACTGGATGAGGCTGCTTCTTGGTCACTTCTTTGGTACCTCTATGGGAAAGGAAATGAGGAGCTTCCTGGAGAGCTATTTGTGGCACCGACTACTTCCCATCAAGAAGCTTGCCGCTTTGTTGTAACAGACCTTACGGCACAGTT ]
[+] EMBL CB634140             [TGGGG GTC TGGAGCTCTCGCGGCGGCCATTGGAGAGGGAGGGGGGAGGCGCAAACCCTAGCTGCCACCGTCCCTGAGGCCTCGCCATGGAGGTGGACCCGCCGCCGCCTCCGCCGCCGCCGATGGCGAACTACTTCGACCCGGAGTCGTCCGGCCGCCGGGAGGAGTACCGCCGCTACAGAAAGAGATTATCTTCTTCAAATGCCTCTCCACTGTTGGGTACTGCGGTCTCCAAATTTTCAGAAGCAAGGCTGTTCTGTGATGGAAACAGCATACAGAGGCGGCCCAATGCTGGTCTACTCCTTGAAGATATCAAGCAGGAGGCTGCTGATATTTCTGATTTTGATAGCCTGGATGAATCTAAGCTGTTTGGATCAGGAAAAAAAAGGGCATCATTGGATGCCTCAGATGCAGGTTTCAGTTCAGGTAGGCAGGCAGTGCGGTCGGCATTGAAATCAGTCAAACTGGAGGAGGATATGCCACATGAAGGAGAAACAACTTCTACAATTTTTGCATCCCTCCTTGATTCTGCAATCCAAGGATTGATGCCCTTCTCGGATGTGATTTTACAATTTGAGAGGACATGTCGAAATGCTTCAGAGTCTATAAGGTCCGCTGGGACAGGAAAGCTTCGGATGGTGGAGGATAGACTTATGCAGCAAAAAGCGCAATTGTTACTGGATGAGGCTGCTTCTTGGTCACTTCTTTGGTACCTCTATGGGAAAGGAAATGACGAGCTTCCTGGAGAGCTATTTGTGGCACCGACTACTTCCCATCAAGAAACTTGCCGCTTTGTTGTAACAGACCTTACGGCACAGTTA]
[+] EMBL CB627713             [                                                                        ccccgcctCCTCGCCATGGAGGTGGACCCGCCGCCGCCTCCGCCGCCGCCGATGGCGAACTACTTCGACCCGGAGTCGTCCGGCCGCCGGGAGGAGTACCGCCGCTACAGAAAGAGATTATCTTCTTCAAATGCCTCTCCACTGTTGGGTACTGCGGTCTCCAAATTTTCAGAAGCAAGGCTGTTCTGTGATGGAAACAGCCTACAGAGGCGGCCCAATGCTGGTCTACTCCTTGAAGATATCAAGCAGGAGGCTGCTGATATTTCTGATTTTGATAGCCTGGATGAATCTAAGCTGTTTGGATCAGGAAAAAAAAGGGCATCATTGGATGCCTCAGATGCAGGTTTCAGTTCAGGTAGGCAGGCAGTGCGGTCGGCATTGAAATCAGTCAAACTGGAGGAGGATATGCCACATGAAGGAGAAACAACTTCTACAATTTTTGCATCCCTCCTTGATTCTGCAATCCAAGGATTGATGCCCTTCTCGGATGTGATTTTACAATTTGAGAGGACATGTCGAAATGCTTCATAGTCGATAAGGTCCGCTGGGACAGGAAAGCTTCGGATGGTGGAGGATAGACTTATGCAGCAAAAAGCGCAATTGTTACTGGATGAGGCTGCTTCTTGGTCACTTCTTTGGTACCTCTATGGGAAAGGAAATGACGAGCTTCCTGGAGAGCTATTTGTGGCACCGACTACTTCCCATCAAGAAGCTTGCCGCTTTGTTGTAACAG                 ]


>consensus_5508#0 TGGGGCGCCTTGGAGCTCTCGCGGCGGCCATTGGAGAGGGAGGGGGGAGGCGCAAACCCT AGCTGCCACCGTCCCTGAGGCCTCGCCATGGAGGTGGACCCGCCGCCGCCTCCGCCGCCG CCGATGGCGAACTACTTCGACCCGGAGTCGTCCGGCCGCCGGGAGGAGTACCGCCGCTAC AGAAAGAGATTATCTTCTTCAAATGCCTCTCCACTGTTGGGTACTGCGGTCTCCAAATTT TCAGAAGCAAGGCTGTTCTGTGATGGAAACAGCATACAGAGGCGGCCCAATGCTGGTCTA CTCCTTGAAGATATCAAGCAGGAGGCTGCTGATATTTCTGATTTTGATAGCCTGGATGAA TCTAAGCTGTTTGGATCAGGAAAAAAAAGGGCATCATTGGATGCCTCAGATGCAGGTTTC AGTTCAGGTAGGCAGGCAGTGCGGTCGGCATTGAAATCAGTCAAACTGGAGGAGGATATG CCACATGAAGGAGAAACAACTTCTACAATTTTTGCATCCCTCCTTGATTCTGCAATCCAA GGATTGATGCCCTTCTCGGATGTGATTTTACAATTTGAGAGGACATGTCGAAATGCTTCA GAGTCGATAAGGTCCGCTGGGACAGGAAAGCTTCGGATGGTGGAGGATAGACTTATGCAG CAAAAAGCGCAATTGTTACTGGATGAGGCTGCTTCTTGGTCACTTCTTTGGTACCTCTAT GGGAAAGGAAATGACGAGCTTCCTGGAGAGCTATTTGTGGCACCGACTACTTCCCATCAA GAAGCTTGCCGCTTTGTTGTAACAGACCTTACGGCACAGTTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)