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Oryza sativa
cluster # 5519 cluster # 5519       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5519#0 length = 3085 sequences # 1  
 consensus_5519#1 length = 763 sequences # 2  
consensusID : consensus_5519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3085
fasta sequence 
                              [TGCCATGGCCGGCGACGAGGTGGATGCGCCGAAGGCTCTCCTCCCACCCAGACCGGCCATCCTCGTGGCGAGCGCCGGTCAGCATCTACCAAGGTCCAAGGGCAAATGGTACGCGCCGCCATCGTACGGTCGATCTCGTCGTGCGCGTCCTGTTCGATGCCCCGACGCCGCTCGCCGCCCGTCCTCGCGGACGCCGCCGGAGCCGGAGCCACCGGTTGGTTTGGTAGACTTGTCCCCCTTCGCCTGCCTCCGCTTCACCTCGTCGACGCCTCACCCCACTTCGATTCCCACCACCACTCCACCAGCCGTCCATACACCCCGATCCCCAATCCCCAGTTCCAGTGAGGTCCACTGCCACTTGCAGCTCGCCGGAGAGAAAACGCGACAGGTTGGAACTGCAAGGTGGCGACCTGGAGGTCAGGGCAAGTCTCAGTGATCATCCGGTCATCGTGGATGCGTTGCAGGAGCGAGTTAATCCTGCTGCTCCGCTGCTCGCCAGTGCGGCGCTGCTTCTGCCTGGTGATCTCATCTAGCTTTGCAAATCAAGCATGTGTTCCTGCACCGATAAATCATTGGTCTTGAAGCTGGAGCGATGGGGATGGAACCATCAAGGTTTTCCTTCCACGTGACCAGCATCGTCTTGGTAGACTCATCAGGATGGCACCATACCACTGAAGTTGTTGTGTGATAAGTCAAGGACCTCAAGATAACATTGGGTACATATAGAACTTGGTATATGACCACTTATTTTATTCCTGGAAAAGCTAAGATAGTAGACGTTTCGAAGATACCTGCCGAAGTCACGAGTAATTGAAGAGAAGCTGTTGCTAGAGTAATCCAAGAGAACACCACCATCTCTAGTAGTTGTCAGTGGTATAGGTACGTTACCATGCAGTCTGTTGGAACTAAGATTGAGTCTATCTAAAGTGTGCAAGGGAAGAACAGATGGATTATTTTCCAAGCTAGTGAACATGTTGTTAGAGAGTACTAACACGGACAAGCTATTCTTCCAGTTATCCCATATCCAGCTTGGTATTACTCCATTTATTCTGTTGTTTGAAAGGTCCAAGTAAGACATACCTTTTATATCTCTCAATGCGCCTGGAATTTTTGTAAGGTTGCAAGATGCTAGTCCCAGGTATTTGATTGTAGGGAAGTAATGAAATGGATAGCCATCTTCTCGATCTATCACCGACAACATATTGTTAGAGATAATTAATGATTCTAGTTTCTCCATCTTCCAAAGAAGGTTAATTTCCAGTGTACCATTCAATTGATTTGATTGAAGCACGAGATTTGTTAGTCTTCTAAGATCAAAGAACGATTTGGGTATGTAGCCTGTAAGGTGGTTATAGCTTAAGTCGATGAATTCTAACAACGAGGAAAACGGGTCTGAAATGTCTTCTAGATGTCCAGAAAGTTGGTTTGATCGCAGATCTAGCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCTGTGTGGATGAGGGACAGAGAGAGAACAACAGTCAAAGTTTGTTCAAAAAAGAAAAGCACAGAATGTCAGAAGTCCTGATATATGTACTCAAATGTGTGTTCTTACCGCTGAGGCTGTTAAGTGAAAGTTCCAAATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGGCCCATAGAAGCTGCAATTAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGGAGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACAGTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTATGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATTTGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTGTCCTCTGAAGATTTAGTGATTCCAAATATTTTCCAGGTGGGAAATCCGGAAGTTGGACAAAAAGAGTAGGATTGAAAGATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAAAATTATTGTTCGAGAGAGCAAGGTCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAACCCTTCCAGAAATTCCATTGTAGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAAATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAGGGAGAGAGTGTGCTAAAGCAACGGACCAGGTTGGTTCACTAGTAATGCGCACTTGATCAAGATAGAGCTCTCTCAAATTGCTCAGGTTTGCTACAATGGTTTGAAAACTCGGTTCTTGAAAAAACAGATAATTGAAGGAAAGATCAAGAGCACGCAAATTCTTGAGATGTGCAATTCCAATGGGTATCTGACCAAAGAAGCCTGCTTCTGACAAATCGAGCCTGAGGAGTTTGGTGAGCCGCTGAAACCCGAAACTAGGAAGAACGGTCCGGTTGAAATCGTTACCAGCAAGGCTGAGGTTTCTCAGAGTGGTGAGGTTGAAGACCGCTGGGTCTAGGCCACCGGGGCTCTGGAGATTATAGTAACTGAGGTCCAACGCTGTTACCTGCCCAGAGGATGTGTCGCAGGTGACACCCTCCCAGTGGCAACAGTCGGTGTTCAGTTTCCATGACGAGAGGTTTGGATTAATGAAGGAGCTCTTCAGCTGGAGAAGCGCTTCAGCTTGGTGAGGATGGCAATGAACTGGGATGGTGGTGTTGGCAACAGTTTGGATGGAGCAGTACAATGTGAGTAGCAGCAGTATGAGGAGAAGCTGTGGTAGTGTGGATGCCATCTCTGTATTGGTTTGCCACTACACATAACCACTTGGGTGGGTGGTTCTCAAGGTAATATATGTAGGTTAATTACATAGGAAAAACAGTAGGTTTTAATTAAAAAGAAAAGGGAAAAGGCTGGCCTGTACATCATTAAATTTTTATATTTGTTAGTATTTCCTCAATATGTTGCGTTCAATCATCAATATAACC]

[+] EMBL AK065680             [TGCCATGGCCGGCGACGAGGTGGATGCGCCGAAGGCTCTCCTCCCACCCAGACCGGCCATCCTCGTGGCGAGCGCCGGTCAGCATCTACCAAGGTCCAAGGGCAAATGGTACGCGCCGCCATCGTACGGTCGATCTCGTCGTGCGCGTCCTGTTCGATGCCCCGACGCCGCTCGCCGCCCGTCCTCGCGGACGCCGCCGGAGCCGGAGCCACCGGTTGGTTTGGTAGACTTGTCCCCCTTCGCCTGCCTCCGCTTCACCTCGTCGACGCCTCACCCCACTTCGATTCCCACCACCACTCCACCAGCCGTCCATACACCCCGATCCCCAATCCCCAGTTCCAGTGAGGTCCACTGCCACTTGCAGCTCGCCGGAGAGAAAACGCGACAGGTTGGAACTGCAAGGTGGCGACCTGGAGGTCAGGGCAAGTCTCAGTGATCATCCGGTCATCGTGGATGCGTTGCAGGAGCGAGTTAATCCTGCTGCTCCGCTGCTCGCCAGTGCGGCGCTGCTTCTGCCTGGTGATCTCATCTAGCTTTGCAAATCAAGCATGTGTTCCTGCACCGATAAATCATTGGTCTTGAAGCTGGAGCGATGGGGATGGAACCATCAAGGTTTTCCTTCCACGTGACCAGCATCGTCTTGGTAGACTCATCAGGATGGCACCATACCACTGAAGTTGTTGTGTGATAAGTCAAGGACCTCAAGATAACATTGGGTACATATAGAACTTGGTATATGACCACTTATTTTATTCCTGGAAAAGCTAAGATAGTAGACGTTTCGAAGATACCTGCCGAAGTCACGAGTAATTGAAGAGAAGCTGTTGCTAGAGTAATCCAAGAGAACACCACCATCTCTAGTAGTTGTCAGTGGTATAGGTACGTTACCATGCAGTCTGTTGGAACTAAGATTGAGTCTATCTAAAGTGTGCAAGGGAAGAACAGATGGATTATTTTCCAAGCTAGTGAACATGTTGTTAGAGAGTACTAACACGGACAAGCTATTCTTCCAGTTATCCCATATCCAGCTTGGTATTACTCCATTTATTCTGTTGTTTGAAAGGTCCAAGTAAGACATACCTTTTATATCTCTCAATGCGCCTGGAATTTTTGTAAGGTTGCAAGATGCTAGTCCCAGGTATTTGATTGTAGGGAAGTAATGAAATGGATAGCCATCTTCTCGATCTATCACCGACAACATATTGTTAGAGATAATTAATGATTCTAGTTTCTCCATCTTCCAAAGAAGGTTAATTTCCAGTGTACCATTCAATTGATTTGATTGAAGCACGAGATTTGTTAGTCTTCTAAGATCAAAGAACGATTTGGGTATGTAGCCTGTAAGGTGGTTATAGCTTAAGTCGATGAATTCTAACAACGAGGAAAACGGGTCTGAAATGTCTTCTAGATGTCCAGAAAGTTGGTTTGATCGCAGATCTAGCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCTGTGTGGATGAGGGACAGAGAGAGAACAACAGTCAAAGTTTGTTCAAAAAAGAAAAGCACAGAATGTCAGAAGTCCTGATATATGTACTCAAATGTGTGTTCTTACCGCTGAGGCTGTTAAGTGAAAGTTCCAAATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGGCCCATAGAAGCTGCAATTAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGGAGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACAGTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTATGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATTTGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTGTCCTCTGAAGATTTAGTGATTCCAAATATTTTCCAGGTGGGAAATCCGGAAGTTGGACAAAAAGAGTAGGATTGAAAGATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAAAATTATTGTTCGAGAGAGCAAGGTCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAACCCTTCCAGAAATTCCATTGTAGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAAATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAGGGAGAGAGTGTGCTAAAGCAACGGACCAGGTTGGTTCACTAGTAATGCGCACTTGATCAAGATAGAGCTCTCTCAAATTGCTCAGGTTTGCTACAATGGTTTGAAAACTCGGTTCTTGAAAAAACAGATAATTGAAGGAAAGATCAAGAGCACGCAAATTCTTGAGATGTGCAATTCCAATGGGTATCTGACCAAAGAAGCCTGCTTCTGACAAATCGAGCCTGAGGAGTTTGGTGAGCCGCTGAAACCCGAAACTAGGAAGAACGGTCCGGTTGAAATCGTTACCAGCAAGGCTGAGGTTTCTCAGAGTGGTGAGGTTGAAGACCGCTGGGTCTAGGCCACCGGGGCTCTGGAGATTATAGTAACTGAGGTCCAACGCTGTTACCTGCCCAGAGGATGTGTCGCAGGTGACACCCTCCCAGTGGCAACAGTCGGTGTTCAGTTTCCATGACGAGAGGTTTGGATTAATGAAGGAGCTCTTCAGCTGGAGAAGCGCTTCAGCTTGGTGAGGATGGCAATGAACTGGGATGGTGGTGTTGGCAACAGTTTGGATGGAGCAGTACAATGTGAGTAGCAGCAGTATGAGGAGAAGCTGTGGTAGTGTGGATGCCATCTCTGTATTGGTTTGCCACTACACATAACCACTTGGGTGGGTGGTTCTCAAGGTAATATATGTAGGTTAATTACATAGGAAAAACAGTAGGTTTTAATTAAAAAGAAAAGGGAAAAGGCTGGCCTGTACATCATTAAATTTTTATATTTGTTAGTATTTCCTCAATATGTTGCGTTCAATCATCAATATAACC]




>consensus_5519#0
TGCCATGGCCGGCGACGAGGTGGATGCGCCGAAGGCTCTCCTCCCACCCAGACCGGCCAT
CCTCGTGGCGAGCGCCGGTCAGCATCTACCAAGGTCCAAGGGCAAATGGTACGCGCCGCC
ATCGTACGGTCGATCTCGTCGTGCGCGTCCTGTTCGATGCCCCGACGCCGCTCGCCGCCC
GTCCTCGCGGACGCCGCCGGAGCCGGAGCCACCGGTTGGTTTGGTAGACTTGTCCCCCTT
CGCCTGCCTCCGCTTCACCTCGTCGACGCCTCACCCCACTTCGATTCCCACCACCACTCC
ACCAGCCGTCCATACACCCCGATCCCCAATCCCCAGTTCCAGTGAGGTCCACTGCCACTT
GCAGCTCGCCGGAGAGAAAACGCGACAGGTTGGAACTGCAAGGTGGCGACCTGGAGGTCA
GGGCAAGTCTCAGTGATCATCCGGTCATCGTGGATGCGTTGCAGGAGCGAGTTAATCCTG
CTGCTCCGCTGCTCGCCAGTGCGGCGCTGCTTCTGCCTGGTGATCTCATCTAGCTTTGCA
AATCAAGCATGTGTTCCTGCACCGATAAATCATTGGTCTTGAAGCTGGAGCGATGGGGAT
GGAACCATCAAGGTTTTCCTTCCACGTGACCAGCATCGTCTTGGTAGACTCATCAGGATG
GCACCATACCACTGAAGTTGTTGTGTGATAAGTCAAGGACCTCAAGATAACATTGGGTAC
ATATAGAACTTGGTATATGACCACTTATTTTATTCCTGGAAAAGCTAAGATAGTAGACGT
TTCGAAGATACCTGCCGAAGTCACGAGTAATTGAAGAGAAGCTGTTGCTAGAGTAATCCA
AGAGAACACCACCATCTCTAGTAGTTGTCAGTGGTATAGGTACGTTACCATGCAGTCTGT
TGGAACTAAGATTGAGTCTATCTAAAGTGTGCAAGGGAAGAACAGATGGATTATTTTCCA
AGCTAGTGAACATGTTGTTAGAGAGTACTAACACGGACAAGCTATTCTTCCAGTTATCCC
ATATCCAGCTTGGTATTACTCCATTTATTCTGTTGTTTGAAAGGTCCAAGTAAGACATAC
CTTTTATATCTCTCAATGCGCCTGGAATTTTTGTAAGGTTGCAAGATGCTAGTCCCAGGT
ATTTGATTGTAGGGAAGTAATGAAATGGATAGCCATCTTCTCGATCTATCACCGACAACA
TATTGTTAGAGATAATTAATGATTCTAGTTTCTCCATCTTCCAAAGAAGGTTAATTTCCA
GTGTACCATTCAATTGATTTGATTGAAGCACGAGATTTGTTAGTCTTCTAAGATCAAAGA
ACGATTTGGGTATGTAGCCTGTAAGGTGGTTATAGCTTAAGTCGATGAATTCTAACAACG
AGGAAAACGGGTCTGAAATGTCTTCTAGATGTCCAGAAAGTTGGTTTGATCGCAGATCTA
GCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCTGTGTGGATGAGGG
ACAGAGAGAGAACAACAGTCAAAGTTTGTTCAAAAAAGAAAAGCACAGAATGTCAGAAGT
CCTGATATATGTACTCAAATGTGTGTTCTTACCGCTGAGGCTGTTAAGTGAAAGTTCCAA
ATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGGCCCATAGAAGCTGCAATT
AAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGGA
GAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACAG
TGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTAT
GAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATTT
GAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTGTCCTCTGAAGATTTAGTGA
TTCCAAATATTTTCCAGGTGGGAAATCCGGAAGTTGGACAAAAAGAGTAGGATTGAAAGA
TACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAAA
ATTATTGTTCGAGAGAGCAAGGTCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAAC
CCTTCCAGAAATTCCATTGTAGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAAA
TGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAGG
GAGAGAGTGTGCTAAAGCAACGGACCAGGTTGGTTCACTAGTAATGCGCACTTGATCAAG
ATAGAGCTCTCTCAAATTGCTCAGGTTTGCTACAATGGTTTGAAAACTCGGTTCTTGAAA
AAACAGATAATTGAAGGAAAGATCAAGAGCACGCAAATTCTTGAGATGTGCAATTCCAAT
GGGTATCTGACCAAAGAAGCCTGCTTCTGACAAATCGAGCCTGAGGAGTTTGGTGAGCCG
CTGAAACCCGAAACTAGGAAGAACGGTCCGGTTGAAATCGTTACCAGCAAGGCTGAGGTT
TCTCAGAGTGGTGAGGTTGAAGACCGCTGGGTCTAGGCCACCGGGGCTCTGGAGATTATA
GTAACTGAGGTCCAACGCTGTTACCTGCCCAGAGGATGTGTCGCAGGTGACACCCTCCCA
GTGGCAACAGTCGGTGTTCAGTTTCCATGACGAGAGGTTTGGATTAATGAAGGAGCTCTT
CAGCTGGAGAAGCGCTTCAGCTTGGTGAGGATGGCAATGAACTGGGATGGTGGTGTTGGC
AACAGTTTGGATGGAGCAGTACAATGTGAGTAGCAGCAGTATGAGGAGAAGCTGTGGTAG
TGTGGATGCCATCTCTGTATTGGTTTGCCACTACACATAACCACTTGGGTGGGTGGTTCT
CAAGGTAATATATGTAGGTTAATTACATAGGAAAAACAGTAGGTTTTAATTAAAAAGAAA
AGGGAAAAGGCTGGCCTGTACATCATTAAATTTTTATATTTGTTAGTATTTCCTCAATAT
GTTGCGTTCAATCATCAATATAACC

consensusID : consensus_5519#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 763
fasta sequence 
                              [AGATCTAGCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCGCTGAGGCTGTTAAGTGAAAGTTCCAAATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGACCCATAGAAGCTGCAATTAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGGAGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACAGTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTATGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATTTGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTATCCTCTGAAGATTTAGTGATTCCAAATATTTTCCAGGTGGGAAATCTGGAAGTTGGACAAAAAGAGTAGGATTGAAAGATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAAAATTATTGTTCGAGAGAGCAAGGGCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAACCCTTCCAGAAATTCTATTGTGGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAAATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAGGGAGAGAGTGTGCTAAAGCAGCGG]

[-] EMBL CB620466             [AGATCTAGCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCGCTGAGGCTGTTAAGTGAAAGTTCCAAATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGACCCATAGAAGCTGCAATTAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGGAGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACAGTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTATGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATTTGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTATCCTCTGAAGATTTAGTGATTCCAAATATTTTCCAGGTGGGAAATCTGGAAGTTGGACAAAAAGAGTAGGATTGAAAGATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAAAATTATTGTTCGAGAGAGCAAGGGCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAACCCTTCCAGAAATTCTATTGTGGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAAATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAGGGAGAGAGTGTGCTAAAGCAGCGG]
[-] EMBL CB618793             [                                                                                                                                                                                                                                                                ACAGTGGGTTCTCTATGCGTGATCCAGAGAGCCATAATGTATGTAGAGATGGAAGGCTAGGTATGAAAGTAGCAACCTGCTTGGGAGATCATACGTTGGTAAGGCCCAAAAATTTCAATGATTTGAGGTGGATAAACGAGGTTGGCATGTTACCAGAAAAGTTTATCCTCTGAAGATTTAGTGATTCCAAATATTTTCCAGGTGGGAAATGTGGAAGTTGGACAAAAAGAGTAGGATTGAAAGATACATCAGGAGACCTCAAATTTTGTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAAAATTATTGTTCGAGAGAGCAAGGGCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAACCCTTCCAGAAATTCTATTGTGGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAAATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAGGGAG                    ]




>consensus_5519#1
AGATCTAGCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCGCTGAGG
CTGTTAAGTGAAAGTTCCAAATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATT
GACCCATAGAAGCTGCAATTAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATC
CAAGGGGGTATTGGACTGGAGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATT
GTTCCAATCCAAGATAACAGTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCT
AGAGATGGAAGGCTAGGTATGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGG
CCCAAAAATTTCAATGATTTGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTT
ATCCTCTGAAGATTTAGTGATTCCAAATATTTTCCAGGTGGGAAATCTGGAAGTTGGACA
AAAAGAGTAGGATTGAAAGATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTT
GTGGGAAATTGCCCTTCAAAATTATTGTTCGAGAGAGCAAGGGCACTCAAGAAAAAGAAG
TCTGCAAAGAACTCAGGAACCCTTCCAGAAATTCTATTGTGGTTGAGGTTGATCACCACT
AGAGAGCGGAGTTGGGAAAATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAA
CTAAGATTCTGCAGCAGAGGGAGAGAGTGTGCTAAAGCAGCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5519#0      TGCCATGGCCGGCGACGAGGTGGATGCGCCGAAGGCTCTCCTCCCACCCAGACCGGCCAT 60
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      CCTCGTGGCGAGCGCCGGTCAGCATCTACCAAGGTCCAAGGGCAAATGGTACGCGCCGCC 120
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ATCGTACGGTCGATCTCGTCGTGCGCGTCCTGTTCGATGCCCCGACGCCGCTCGCCGCCC 180
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GTCCTCGCGGACGCCGCCGGAGCCGGAGCCACCGGTTGGTTTGGTAGACTTGTCCCCCTT 240
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      CGCCTGCCTCCGCTTCACCTCGTCGACGCCTCACCCCACTTCGATTCCCACCACCACTCC 300
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ACCAGCCGTCCATACACCCCGATCCCCAATCCCCAGTTCCAGTGAGGTCCACTGCCACTT 360
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GCAGCTCGCCGGAGAGAAAACGCGACAGGTTGGAACTGCAAGGTGGCGACCTGGAGGTCA 420
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GGGCAAGTCTCAGTGATCATCCGGTCATCGTGGATGCGTTGCAGGAGCGAGTTAATCCTG 480
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      CTGCTCCGCTGCTCGCCAGTGCGGCGCTGCTTCTGCCTGGTGATCTCATCTAGCTTTGCA 540
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AATCAAGCATGTGTTCCTGCACCGATAAATCATTGGTCTTGAAGCTGGAGCGATGGGGAT 600
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GGAACCATCAAGGTTTTCCTTCCACGTGACCAGCATCGTCTTGGTAGACTCATCAGGATG 660
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GCACCATACCACTGAAGTTGTTGTGTGATAAGTCAAGGACCTCAAGATAACATTGGGTAC 720
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ATATAGAACTTGGTATATGACCACTTATTTTATTCCTGGAAAAGCTAAGATAGTAGACGT 780
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TTCGAAGATACCTGCCGAAGTCACGAGTAATTGAAGAGAAGCTGTTGCTAGAGTAATCCA 840
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AGAGAACACCACCATCTCTAGTAGTTGTCAGTGGTATAGGTACGTTACCATGCAGTCTGT 900
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TGGAACTAAGATTGAGTCTATCTAAAGTGTGCAAGGGAAGAACAGATGGATTATTTTCCA 960
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AGCTAGTGAACATGTTGTTAGAGAGTACTAACACGGACAAGCTATTCTTCCAGTTATCCC 1020
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ATATCCAGCTTGGTATTACTCCATTTATTCTGTTGTTTGAAAGGTCCAAGTAAGACATAC 1080
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      CTTTTATATCTCTCAATGCGCCTGGAATTTTTGTAAGGTTGCAAGATGCTAGTCCCAGGT 1140
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ATTTGATTGTAGGGAAGTAATGAAATGGATAGCCATCTTCTCGATCTATCACCGACAACA 1200
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TATTGTTAGAGATAATTAATGATTCTAGTTTCTCCATCTTCCAAAGAAGGTTAATTTCCA 1260
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GTGTACCATTCAATTGATTTGATTGAAGCACGAGATTTGTTAGTCTTCTAAGATCAAAGA 1320
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ACGATTTGGGTATGTAGCCTGTAAGGTGGTTATAGCTTAAGTCGATGAATTCTAACAACG 1380
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AGGAAAACGGGTCTGAAATGTCTTCTAGATGTCCAGAAAGTTGGTTTGATCGCAGATCTA 1440
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GCATTTCCAACGATTGATGAGCGAAAAGAAGCTTCGGGATTCTACCTGTGTGGATGAGGG 1500
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      ACAGAGAGAGAACAACAGTCAAAGTTTGTTCAAAAAAGAAAAGCACAGAATGTCAGAAGT 1560
consensus_5519#1      ----------------------------------------AGATCTAGCATTTCCAACGA 20
                                                              *     ** ** **  * * 

consensus_5519#0      CCTGATATATGTACTCAAATGT-GTGTTCTTACCGCTGAGGCTGTTAAGTGAAAGTTCCA 1619
consensus_5519#1      T-TGATGAGCGAAAAGAAGCTTCGGGATTCTACCGCTGAGGCTGTTAAGTGAAAGTTCCA 79
                        ****    * *   **   * * * *  ******************************

consensus_5519#0      AATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGGCCCATAGAAGCTGCAAT 1679
consensus_5519#1      AATAGATAAGCTTAGTCAAGTTCCCAATCCATGATGGTATTGACCCATAGAAGCTGCAAT 139
                      ****************************************** *****************

consensus_5519#0      TAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGG 1739
consensus_5519#1      TAAAGAGCACTAAAGATTCCAAACTTGTACAGTTTCTGATCCAAGGGGGTATTGGACTGG 199
                      ************************************************************

consensus_5519#0      AGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACA 1799
consensus_5519#1      AGAAATTATAGCCTTCGAGCATCAAGTCTCTCAGTTTAATTGTTCCAATCCAAGATAACA 259
                      ************************************************************

consensus_5519#0      GTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTA 1859
consensus_5519#1      GTGGCTTCTCTATGCCTGATCCAGAGAGCCATAATGTATCTAGAGATGGAAGGCTAGGTA 319
                      ************************************************************

consensus_5519#0      TGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATT 1919
consensus_5519#1      TGAAAGTAGCAACCTGCTTGGGAGATCCTACGTTGCTAAGGCCCAAAAATTTCAATGATT 379
                      ************************************************************

consensus_5519#0      TGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTGTCCTCTGAAGATTTAGTG 1979
consensus_5519#1      TGAGGTGGATAAACGAGGCTGGCATGTTACCAGAAAAGTTTATCCTCTGAAGATTTAGTG 439
                      ***************************************** ******************

consensus_5519#0      ATTCCAAATATTTTCCAGGTGGGAAATCCGGAAGTTGGACAAAAAGAGTAGGATTGAAAG 2039
consensus_5519#1      ATTCCAAATATTTTCCAGGTGGGAAATCTGGAAGTTGGACAAAAAGAGTAGGATTGAAAG 499
                      **************************** *******************************

consensus_5519#0      ATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAA 2099
consensus_5519#1      ATACATCAAGAGACCTCAAATTTTCTACCTGGAATATCTTTGTGGGAAATTGCCCTTCAA 559
                      ************************************************************

consensus_5519#0      AATTATTGTTCGAGAGAGCAAGGTCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAA 2159
consensus_5519#1      AATTATTGTTCGAGAGAGCAAGGGCACTCAAGAAAAAGAAGTCTGCAAAGAACTCAGGAA 619
                      *********************** ************************************

consensus_5519#0      CCCTTCCAGAAATTCCATTGTAGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAA 2219
consensus_5519#1      CCCTTCCAGAAATTCTATTGTGGTTGAGGTTGATCACCACTAGAGAGCGGAGTTGGGAAA 679
                      *************** ***** **************************************

consensus_5519#0      ATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAG 2279
consensus_5519#1      ATGAACGATGAATAGTTCCACCTAGGTCACATTGGGACAAACTAAGATTCTGCAGCAGAG 739
                      ************************************************************

consensus_5519#0      GGAGAGAGTGTGCTAAAGCAACGGACCAGGTTGGTTCACTAGTAATGCGCACTTGATCAA 2339
consensus_5519#1      GGAGAGAGTGTGCTAAAGCAGCGG------------------------------------ 763
                      ******************** ***                                    

consensus_5519#0      GATAGAGCTCTCTCAAATTGCTCAGGTTTGCTACAATGGTTTGAAAACTCGGTTCTTGAA 2399
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AAAACAGATAATTGAAGGAAAGATCAAGAGCACGCAAATTCTTGAGATGTGCAATTCCAA 2459
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TGGGTATCTGACCAAAGAAGCCTGCTTCTGACAAATCGAGCCTGAGGAGTTTGGTGAGCC 2519
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GCTGAAACCCGAAACTAGGAAGAACGGTCCGGTTGAAATCGTTACCAGCAAGGCTGAGGT 2579
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TTCTCAGAGTGGTGAGGTTGAAGACCGCTGGGTCTAGGCCACCGGGGCTCTGGAGATTAT 2639
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AGTAACTGAGGTCCAACGCTGTTACCTGCCCAGAGGATGTGTCGCAGGTGACACCCTCCC 2699
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AGTGGCAACAGTCGGTGTTCAGTTTCCATGACGAGAGGTTTGGATTAATGAAGGAGCTCT 2759
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TCAGCTGGAGAAGCGCTTCAGCTTGGTGAGGATGGCAATGAACTGGGATGGTGGTGTTGG 2819
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      CAACAGTTTGGATGGAGCAGTACAATGTGAGTAGCAGCAGTATGAGGAGAAGCTGTGGTA 2879
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      GTGTGGATGCCATCTCTGTATTGGTTTGCCACTACACATAACCACTTGGGTGGGTGGTTC 2939
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TCAAGGTAATATATGTAGGTTAATTACATAGGAAAAACAGTAGGTTTTAATTAAAAAGAA 2999
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      AAGGGAAAAGGCTGGCCTGTACATCATTAAATTTTTATATTTGTTAGTATTTCCTCAATA 3059
consensus_5519#1      ------------------------------------------------------------
                                                                                  

consensus_5519#0      TGTTGCGTTCAATCATCAATATAACC 3085
consensus_5519#1      --------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)