cluster # 5572

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Oryza sativa
cluster # 5572 cluster # 5572 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5572#0 length = 1782 sequences # 3
consensusID : consensus_5572#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1782
fasta sequence
                              [CACCTCCACCTCTCCTCTTCCTTCCCCTCGCCGCCGCCGCCTTCTCGTCGACGCAGCCATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTGGCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCCGACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCGACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCCTCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTGCTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTCCGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTCATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCCACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGCAAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTTGGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCGGCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTGGATTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTCCGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCTGGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAAGAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAGCAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAGGTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAGAGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAGAAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAGAAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAGGTTTTATTCTCTATCTCCTGAGAGATGCTTGTGATATTGGTTGATCGACAGTGTCGTGATGTTCATCGTGTTGATTAGCTGGGCTAATCTGATAGTTTATCTGCTGGCAGAAGAACTATGCCACTGTCAAGTTTTTGGTAGCCTTGTAGTACTTTATAAGATCTCCAATCTACCGCAGAATGTTCTACTTTTGTGTGCACTAGAGGTGTCTTCAAAAGTTGTATCTTTTGTTTTTGTTAGCTTACTAGCCTGACTGCCTGAGCCTTCAGGTTAAAGATAGTATGGTAAAACTGTTTCTGGCTTCATGTGGTTCGCATCAATTTTGTGATCATCTAAGAATATGTCTCAGTTGTTGTCTTCCCTGAATTACTCATCTAGCATATGCTGTACACTTGGAACCCAGTTTCAATAGGAGCTGGGCTGGGCCATTTGTACTCTCTTACTTTGCATGACTTGTGAGGCGATGGAATGGAATT]

[+] EMBL AK073857             [CACCTCCACCTCTCCTCTTCCTTCCCCTCGCCGCCGCCGCCTTCTCGTCGACGCAGCCATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTGGCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCCGACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCGACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCCTCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTGCTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTCCGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTCATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCCACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGCAAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTTGGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCGGCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTGGATTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTCCGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCTGGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAAGAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAGCAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAGGTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAGAGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAGAAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAGAAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAGGTTTTATTCTCTATCTCCTGAGAGATGCTTGTGATATTGGTTGATCGACAGTGTCGTGATGTTCATCGTGTTGATTAGCTGGGCTAATCTGATAGTTTATCTGCTGGCAGAAGAACTATGCCACTGTCAAGTTTTTGGTAGCCTTGTAGTACTTTATAAGATCTCCAATCTACCGCAGAATGTTCTACTTTTGTGTGCACTAGAGGTGTCTTCAAAAGTTGTATCTTTTGTTTTTGTTAGCTTACTAGCCTGACTGCCTGAGCCTTCAGGTTAAAGATAGTATGGTAAAACTGTTTCTGGCTTCATGTGGTTCGCATCAATTTTGTGATCATCTAAGAATATGTCTCAGTTGTTGTCTTCCCTGAATTACTCATCTAGCATATGCTGTACACTTGGAACCCAGTTTCAATAGGAGCTGGGCTGGGCCATTTGTACTCTCTTACTTTGCATGACTTGTGAGGCGATGGAATGGAATT]
[+] EMBL CB621336             [            TCCTCTTCCTTCCCCTCGCCGCCGCCGCCTTCTCGTCGACGCAGCCATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTGGCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCCGACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCGACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCCTCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTGCTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTCCGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTCATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCCACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGCAAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTTGGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCGGCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTGGATTCAGTTGCATTACCAATTTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB621337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTGATTTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTCCGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCTGGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAAGAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAGCAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAGGTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAGAGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAGAAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAGAAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAGGTTTTATTCTCTATCTCCTGAGAGATGCTTGTGATATTGGTTGATCGACAGTGTCGTGATGTTCATTGTGTTGATTAGCTGGGCTAATCTGATAGTTTATCTGCTGGCAGAAGAACTATGCCACTGTCAAGTTTTTGGTAGCCTTGTAGTACTTTATAAGATCTCCAATCTACCGCAGAATGTTCTACTTTTGTGTGCACTAAAGGTGTCTTCAAAAGTTGTATCTTTTGTTTTTGTTAGCTTACTAGCCTGACTGCCTGAGCCTTCAGGTTAAAGATAGTATGGTAAAACTGTTTCTGGCTGCATGTGGTTCGCATCAATTTTGTGATCATCTAAAAAaaaga                                                                                                                                    ]




>consensus_5572#0
CACCTCCACCTCTCCTCTTCCTTCCCCTCGCCGCCGCCGCCTTCTCGTCGACGCAGCCAT
GTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTGGC
CGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCCGA
CGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCGAC
GACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCCTC
CATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTGCT
CGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTCCG
CACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTCAT
CGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCCAC
CAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGCAA
GGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTTGG
GAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCGGC
CGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTGGA
TTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTCCG
GTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCTGG
AGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAAGA
AGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAGCA
ACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAGGT
GAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAGAG
CAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAGAA
AAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAGAA
ATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAGGTTTTATTCTCTAT
CTCCTGAGAGATGCTTGTGATATTGGTTGATCGACAGTGTCGTGATGTTCATCGTGTTGA
TTAGCTGGGCTAATCTGATAGTTTATCTGCTGGCAGAAGAACTATGCCACTGTCAAGTTT
TTGGTAGCCTTGTAGTACTTTATAAGATCTCCAATCTACCGCAGAATGTTCTACTTTTGT
GTGCACTAGAGGTGTCTTCAAAAGTTGTATCTTTTGTTTTTGTTAGCTTACTAGCCTGAC
TGCCTGAGCCTTCAGGTTAAAGATAGTATGGTAAAACTGTTTCTGGCTTCATGTGGTTCG
CATCAATTTTGTGATCATCTAAGAATATGTCTCAGTTGTTGTCTTCCCTGAATTACTCAT
CTAGCATATGCTGTACACTTGGAACCCAGTTTCAATAGGAGCTGGGCTGGGCCATTTGTA
CTCTCTTACTTTGCATGACTTGTGAGGCGATGGAATGGAATT
clustalw multiple alignements is not computed in this case