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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5593 cluster # 5593       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5593#0 length = 781 sequences # 3  

consensusID : consensus_5593#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 781
fasta sequence
                              [CCACTAGTTAAGGTAGTGAACCTAATCCACCCTACAAATCTTCACGTGTGCTTGAAATGGGCCTGAGTTGGGTTGGATATGGAAAACCCGCCTTTCCACCAAAAAATATGGGCCTGGATTGGCTGCCAACGTGGGTCCTATACTTCCTTCATCGCCGGAGGCGCCGCCGTGCCGGTGACCGGCGGGCGGCGGCGATGGGGGCGAGGCGGAGGGGGAGGAGGGATCCCGCTCCAGTTCCGGCCATCACTCTCGCCGTACGTGCCCTTGCTCCGGCCAGAGGGGCTCCCCTCGCAGAGGCTTCTTCTCCGGGGGCCACCTTCCGTCGGGGGCAGCCCTAGCTCGATCCGCGGACGGAGCAGAGGCAGCGCGGCGCGGCGCGGCGCAGCTCGGCCGCATCACGGATGACCGCCGCGGCTGCCATTCCGGGGCGGCGAATCAGTCAGAGCCCGAGGGAGTTACGGATCCAAGCAAGGACCAAGAACCGCAAGACTTTGAGCAAGAGGTCGGAGATGAAGCTTCGGAGAATCCCTACGCTTACTACCAGGAGGGTGATGAAGACGATGGCGCCCAGTAGGTCTTAGTTACGGTCGTTGCCTGTGGCAATGGAGTGCCGCTGCCTTAACTCCGCTGCCTTACCTACTTCTGTTTTTGGAATGTATTCCGGACCGCTCGGTCCGATGATTTAAGACTGTGCCTGCGGGCTTATGATGTAATAATTCGTACTAGACTCTCGTGTATGTGCACTTGATATTTCAGCTATGAGTTCGTGTGTACCAAAAAA]

[+] EMBL AK062778             [CCACTAGTTAAGGTAGTGAACCTAATCCACCCTACAAATCTTCACGTGTGCTTGAAATGGGCCTGAGTTGGGTTGGATATGGAAAACCCGCCTTTCCACCAAAAAATATGGGCCTGGATTGGCTGCCAACGTGGGTCCTATACTTCCTTCATCGCCGGAGGCGCCGCCGTGCCGGTGACCGGCGGGCGGCGGCGATGGGGGCGAGGCGGAGGGGGAGGAGGGATCCCGCTCCAGTTCCGGCCATCACTCTCGCCGTACGTGCCCTTGCTCCGGCCAGAGGGGCTCCCCTCGCAGAGGCTTCTTCTCCGGGGGCCACCTTCCGTCGGGGGCAGCCCTAGCTCGATCCGCGGACGGAGCAGAGGCAGCGCGGCGCGGCGCGGCGCAGCTCGGCCGCATCACGGATGACCGCCGCGGCTGCCATTCCGGGGCGGCGAATCAGTCAGAGCCCGAGGGAGTTACGGATCCAAGCAAGGACCAAGAACCGCAAGACTTTGAGCAAGAGGTCGGAGATGAAGCTTCGGAGAATCCCTACGCTTACTACCAGGAGGGTGATGAAGACGATGGCGCCCAGTAGGTCTTAGTTACGGTCGTTGCCTGTGGCAATGGAGTGCCGCTGCCTTAACTCCGCTGCCTTACCTACTTCTGTTTTTGGAATGTATTCCGGACCGCTCGGTCCGATGATTTAAGACTGTGCCTGCGGGCTTATGATGTAATAATTCGTACTAGACTCTCGTGTATGTGCACTTGATATTTCAGCTATGA                   ]
[+] EMBL CF327277             [                                                                                                                                                                                                                                                                                                                                                                                         CGGCGCAGCTCGGCCGCATCACGGATGACCGCCGCGGCTGCCATTCCGGGGCGGCGAATCAGTCAGAGCCCGAGGGAGTTACGGATCCAAGCAAGGACCAAGAACCGCAAGACTTTGAGCAAGAGGTCGGAGATGAAGCTTCGGAGAATCCCTACGCTTACTACCAGGAGGGTGATGAAGACGATGGCGCCCAGTAGGTCTTAGTTACGGTCGTTGCCTGTGGCAATGGAGTGCCGCTGCCTTAACTCCGCTGCCTTACCTACTTCTGTTTTTGGAATGTATTCCGGACCGCTCGGTCCGATGATTTAAGACTGTGCCTGCGGGCTTATGATGTAATAATTCGTACTAGACTCTCGTGTATGTGCACTTGATATTTCAGCTATGAGTTCGTGTGTACCAAAAA ]
[-] EMBL CF327278             [                                                                                                                                                                                                                                                                                                                                                                                          GGCGCAGCTCGGCCGCATCACGGATGACCGCCGCGGCTGCCATTCCGGGGCGGCGAATCAGTCAGAGCCCGAGGGAGTTACGGATCCAAGCAAGGACCAAGAACCGCAAGACTTTGAGCAAGAGGTCGGAGATGAAGCTTCGGAGAATCCCTACGCTTACTACCAGGAGGGTGATGAAGACGATGGCGCCCAGTAGGTCTTAGTTACGGTCGTTGCCTGTGGCAATGGAGTGCCGCTGCCTTAACTCCGCTGCCTTACCTACTTCTGTTTTTGGAATGTATTCCGGACCGCTCGGTCCGATGATTTAAGACTGTGCCTGCGGGCTTATGATGTAATAATTCGTACTAGACTCTCGTGTATGTGCACTTGATATTTCAGCTATGAGTTCGTGTGTACCAAAAAA]


>consensus_5593#0 CCACTAGTTAAGGTAGTGAACCTAATCCACCCTACAAATCTTCACGTGTGCTTGAAATGG GCCTGAGTTGGGTTGGATATGGAAAACCCGCCTTTCCACCAAAAAATATGGGCCTGGATT GGCTGCCAACGTGGGTCCTATACTTCCTTCATCGCCGGAGGCGCCGCCGTGCCGGTGACC GGCGGGCGGCGGCGATGGGGGCGAGGCGGAGGGGGAGGAGGGATCCCGCTCCAGTTCCGG CCATCACTCTCGCCGTACGTGCCCTTGCTCCGGCCAGAGGGGCTCCCCTCGCAGAGGCTT CTTCTCCGGGGGCCACCTTCCGTCGGGGGCAGCCCTAGCTCGATCCGCGGACGGAGCAGA GGCAGCGCGGCGCGGCGCGGCGCAGCTCGGCCGCATCACGGATGACCGCCGCGGCTGCCA TTCCGGGGCGGCGAATCAGTCAGAGCCCGAGGGAGTTACGGATCCAAGCAAGGACCAAGA ACCGCAAGACTTTGAGCAAGAGGTCGGAGATGAAGCTTCGGAGAATCCCTACGCTTACTA CCAGGAGGGTGATGAAGACGATGGCGCCCAGTAGGTCTTAGTTACGGTCGTTGCCTGTGG CAATGGAGTGCCGCTGCCTTAACTCCGCTGCCTTACCTACTTCTGTTTTTGGAATGTATT CCGGACCGCTCGGTCCGATGATTTAAGACTGTGCCTGCGGGCTTATGATGTAATAATTCG TACTAGACTCTCGTGTATGTGCACTTGATATTTCAGCTATGAGTTCGTGTGTACCAAAAA A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)