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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5599 cluster # 5599       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5599#0 length = 504 sequences # 3  

consensusID : consensus_5599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 504
fasta sequence
                              [CTCCTGCTCGTTCGCATCTCGGTAGCCGAGCGTCGCCACCTCCTCCGATCCTTGCCCCTTTGCTGCCCATCGACCTCCCTCCTTGCCGATGCGCTGGACCCGATGGGCCGCGGTCGAGCTTGCTGGCGCAGCGCTCGAGTTGTACGTCCCACCTCCGCTCCAGTTCGCCCCCTCCACATAGAAGCAGGGGAGCAGGTGCCGGCGACGCGGATGGCATGAGAGGAGACGGAGGCGTACGCGCGGGACTGGCCGGCAGTGGGATGCAAGATATCGAAGATGAAAATTGCTGCCGCGTGCTCGAAATCATCACCTCCGGCATTTAAATGTGTGAAAGACTGGTTCTTAAATTTATTTTTGCTTTCACTGTAACTACATTGTTGTGCTTCTTCTTTGTTCCATAGCTAGAAGCTAGACTGGAAACAACTGTGGCTGTTTCAGGCTTTTTTTTTATCTTGGTGAATTAATGTAAATATATTTAGTTATGGTTATATCCGGTTTTCGATG]

[+] EMBL AK062494             [CTCCTGCTCGTTCGCATCTCGGTAGCCGAGCGTCGCCACCTCCTCCGATCCTTGCCCCTTTGCTGCCCATCGACCTCCCTCCTTGCCGATGCGCTGGACCCGATGGGCCGCGGTCGAGCTTGCTGGCGCAGCGCTCGAGTTGTACGTCCCACCTCCGCTCCAGTTCGCCCCCTCCACATAGAAGCAGGGGAGCAGGTGCCGGCGACGCGGATGGCATGAGAGGAGACGGAGGCGTACGCGCGGGACTGGCCGGCAGTGGGATGCAAGATATCGAAGATGAAAATTGCTGCCGCGTGCTCGAAATCATCACCTCCGGCATTTAAATGTGTGAAAGACTGGTTCTTAAATTTATTTTTGCTTTCACTGTAACTACATTGTTGTGCTTCTTCTTTGTTCCATAGCTAGAAGCTAGACTGGAAACAACTGTGGCTGTTTCAGGCTTTTTTTTTATCTTGGTGAATTAATGTAAATATATTTAGTTATGGTTATATCCGGTTTTCGATG]
[+] EMBL CF301426             [                     GTAGCCGAGCGTCGCCACCTCCTCCGATCCTTGCCCCTTTGCTGCCCATCGACCTCCCTCCTTGCCGATGCGCTGGACCCGATGGGCCGCGGTCGAGCTTGCTGGCGCAGCGCTCGAGTTGTACGTCCCACCTCCGCTCCAGTTCGCCCCCTCCACATATAAGCAGGGGAGCAGGTGCCGGCGACGCGGATGGCATGAGAGGAGACGGAGGCGTACGCGCGGGACTGGCCGGCAGTGGGATGCAAGATATCGAAGATGAAAATTGCTGCCGCGTGCTCCAAATCATCACCTGCGGCATTTAAATGTGTGAAAGACT                                                                                                                                                                       ]
[-] EMBL CF301427             [                                                                                                                            GGCGCAGCGCTCGAGTTGTACGTCCCACCTCCGCTCCAGTTCGCCCCCTCCACATAGAAGCAGGGGAGCAGGTGCCGGCGACGCGGATGGCATGAGAGGAGACGGAGGCGTACGCGCGGGACTGGCCGGCAGTGGGATGCAAGATATCGAAGATGAAAATTGCTGCCGCGTGCTCGAAATCATCACCTCCGGCATTTAAATGTGTGAAAGACTGGTTCTTAAATTTATTTTTGCTTTCACTGTAACTACATTGTTGTGCTTCTTCTTTGTTCCATAGCTAGAAGCTAGACTGGAAACAACTGTGGCTGTTTCAGGC TTTTTTTTATCTTGGTGAATTAATGTAAATATATTTAGTTATGGTTAaaaaa           ]


>consensus_5599#0 CTCCTGCTCGTTCGCATCTCGGTAGCCGAGCGTCGCCACCTCCTCCGATCCTTGCCCCTT TGCTGCCCATCGACCTCCCTCCTTGCCGATGCGCTGGACCCGATGGGCCGCGGTCGAGCT TGCTGGCGCAGCGCTCGAGTTGTACGTCCCACCTCCGCTCCAGTTCGCCCCCTCCACATA GAAGCAGGGGAGCAGGTGCCGGCGACGCGGATGGCATGAGAGGAGACGGAGGCGTACGCG CGGGACTGGCCGGCAGTGGGATGCAAGATATCGAAGATGAAAATTGCTGCCGCGTGCTCG AAATCATCACCTCCGGCATTTAAATGTGTGAAAGACTGGTTCTTAAATTTATTTTTGCTT TCACTGTAACTACATTGTTGTGCTTCTTCTTTGTTCCATAGCTAGAAGCTAGACTGGAAA CAACTGTGGCTGTTTCAGGCTTTTTTTTTATCTTGGTGAATTAATGTAAATATATTTAGT TATGGTTATATCCGGTTTTCGATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)