cluster # 5613

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Oryza sativa
cluster # 5613 cluster # 5613 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5613#0 length = 1479 sequences # 3
consensusID : consensus_5613#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1479
fasta sequence
                              [CTCTCTTCTCCTCTTCTCTTCTCCCTCTTCCTCTTCTCCACCCTCCTATCCGTTCTAGCGAAGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCCCTCTTCCAGCGTGATTTCCAGGATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTGAACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGCCGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCGCGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTGCACTTCTTGGAGGAGAGGGATGAGGAGATGCTGTCCAGGAGGTTGATCAAGCTCAGCCAGTCCAACAAGGTCAGGAGTGCCACCGAGCTGTTCGATTCAATGCGTGCCTCAGGCTTGCAGCCGAGCGCGCATGCCTGTAACTCCCTTCTGGCTTGTTTTGTGCGAAGGGGTTCTTTCGCCGATGCGATGAAGGTATTCGAGTTCATGAAGGGGAAAGGAATGGCAACCGGGCATTCGTACACCTTGATACTCAAGGCTGTTGCCACTACTGAGGGCTACTTTGCAGCCCTGAAAATGTTTGATGAAATTGAAGAGAGCGATAAGAAGAATGTCGATGTGATCGTTTACAACACGGTGATATCTGTGTGCGGAAGAGCAAAAGACTGGAGGCAGGTGGAGAGACTTTGGAGAAGGCTAGGGGAGAATTCTTTGAGTGGAACCTTGATGACTTATGATTTGTTAGTTAGCACATTTGTCCAGTGTGGGCAGTCTGAGTTAGCAGTTGATGCTTATCAGGAAATGTTCAAAAGTGGTATTGATCCAAGTGAAGATATACTGAAGGCCATCATTGCATCATGTACAAAAGAAGGGAAATGGGAGTTTGCGCTTACCACATTCAGGAGAATGTTGAGTGCTGGAATGAAACCTAGTATCATTGTGTTCAATTCCATAATCAACTCACTTGGTAAGGCCGGTGAAGATGAACTTGCCTTTAGGATGTATCATCTGCTAACATCTTCAGGCCTTAAGCCTGATCAATATACATGGAGTGCTTTACTGTCAGCGTTATATAGGTCTGGTCGTTGTTGGGATGTCCTAGATCTTTTTCAAGGAATTAAGACCA]

[+] EMBL AK059620             [CTCTCTTCTCCTCTTCTCTTCTCCCTCTTCCTCTTCTCCACCCTCCTATCCGTTCTAGCGAGGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCCCTCTTCCAGCGTGATTTCCAGAATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTGAACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGCCGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCGCGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTGCACTTCTTGGAGGAGAGGGATGAGGAGATGCTGTCCAGGAGGTTGATCAAGCTCAGCCAGTCCAACAAGGTCAGGAGTGCCACCGAGCTGTTCGATTCAATGCGTGCCTCAGGCTTGCAGCCGAGCGCGCATGCCTGTAACTCCCTTCTGGCTTGTTTTGTGCGAAGGGGTTCTTTCGCCGATGCGATGAAGGTATTCGAGTTCATGAAGGGGAAAGGAATGGCAACCGGGCATTCGTACACCTTGATACTCAAGGCTGTTGCCACTACTGAGGGCTACTTTGCAGCCCTGAAAATGTTTGATGAAATTGAAGAGAGCGATAAGAAGAATGTCGATGTGATCGTTTACAACACGGTGATATCTGTGTGCGGAAGAGCAAAAGACTGGAGGCAGGTGGAGAGACTTTGGAGAAGGCTAGGGGAGAATTCTTTGAGTGGAACCTTGATGACTTATGATTTGTTAGTTAGCACATTTGTCCAGTGTGGGCAGTCTGAGTTAGCAGTTGATGCTTATCAGGAAATGTTCAAAAGTGGTATTGATCCAAGTGAAGATATACTGAAGGCCATCATTGCATCATGTACAAAAGAAGGGAAATGGGAGTTTGCGCTTACCACATTCAGGAGAATGTTGAGTGCTGGAATGAAACCTAGTATCATTGTGTTCAATTCCATAATCAACTCACTTGGTAAGGCCGGTGAAGATGAACTTGCCTTTAGGATGTATCATCTGCTAACATCTTCAGGCCTTAAGCCTGATCAATATACATGGAGTGCTTTACTGTCAGCGTTATATAGGTCTGGTCGTTGTTGGGATGTCCTAGATCTTTTTCAAGGAATTAAGACCA]
[+] EMBL CB623603             [                                   CTCCACCCTCCTATCCGTTCTAGCGAAGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCCCTCTTCCAGCGTGATTTCCAGGATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTGAACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGCCGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCGCGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTGCACTTCTTGGAGGAGAGGGATGAGGAGATGCTGTCCAGGAGGTTGATCAAGCTCAGCCAGTCCAACAAGGTCAGGAGTGCCACCGAGCTGTTCGATTCAATGCGTGCCTCAGGCTTGCAGCCGAGCGCGCATGCCTGTAACTCCCTTCTGGCTTGTTTTGTGCGAAGGGGNTCTTTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB623449             [                                   CTCCACCCTCCTATCCGTTCTAGCGAAGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCCCTCTTCCAGCGTGATTTCCAGGATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTGAACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGCCGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCGCGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_5613#0
CTCTCTTCTCCTCTTCTCTTCTCCCTCTTCCTCTTCTCCACCCTCCTATCCGTTCTAGCG
AAGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCC
CTCTTCCAGCGTGATTTCCAGGATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGT
TTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCA
GCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATC
CATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCG
TGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTG
AACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGC
CGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTG
CTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCG
CGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTGCACTTCTTGGAGGAGAGGGATGAGG
AGATGCTGTCCAGGAGGTTGATCAAGCTCAGCCAGTCCAACAAGGTCAGGAGTGCCACCG
AGCTGTTCGATTCAATGCGTGCCTCAGGCTTGCAGCCGAGCGCGCATGCCTGTAACTCCC
TTCTGGCTTGTTTTGTGCGAAGGGGTTCTTTCGCCGATGCGATGAAGGTATTCGAGTTCA
TGAAGGGGAAAGGAATGGCAACCGGGCATTCGTACACCTTGATACTCAAGGCTGTTGCCA
CTACTGAGGGCTACTTTGCAGCCCTGAAAATGTTTGATGAAATTGAAGAGAGCGATAAGA
AGAATGTCGATGTGATCGTTTACAACACGGTGATATCTGTGTGCGGAAGAGCAAAAGACT
GGAGGCAGGTGGAGAGACTTTGGAGAAGGCTAGGGGAGAATTCTTTGAGTGGAACCTTGA
TGACTTATGATTTGTTAGTTAGCACATTTGTCCAGTGTGGGCAGTCTGAGTTAGCAGTTG
ATGCTTATCAGGAAATGTTCAAAAGTGGTATTGATCCAAGTGAAGATATACTGAAGGCCA
TCATTGCATCATGTACAAAAGAAGGGAAATGGGAGTTTGCGCTTACCACATTCAGGAGAA
TGTTGAGTGCTGGAATGAAACCTAGTATCATTGTGTTCAATTCCATAATCAACTCACTTG
GTAAGGCCGGTGAAGATGAACTTGCCTTTAGGATGTATCATCTGCTAACATCTTCAGGCC
TTAAGCCTGATCAATATACATGGAGTGCTTTACTGTCAGCGTTATATAGGTCTGGTCGTT
GTTGGGATGTCCTAGATCTTTTTCAAGGAATTAAGACCA
clustalw multiple alignements is not computed in this case