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Oryza sativa
cluster # 5615 cluster # 5615       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5615#0 length = 1797 sequences # 1  
consensus_5615#1 length = 878 sequences # 2  

consensusID : consensus_5615#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1797
fasta sequence
                              [AGCGTGCTCCTCCTCTCCTCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCGATGGCCGGCAAGAACGGGAGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGACGCCGACCTGCGCACCGCCTACCGCAAGCTCGCCATGGTACGGTGCTGATTCCTCTGCTTTGCTCTGTTTTTTTTTTTTTTTGCCGATTTAACCGTCTCCCAGTGGCTGTTTGTCTCCGGGCAGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGGTAATTAAATCTCAGCCACCTTCTTCGTCTTCCTCTGCTTCTGACCAGTGCTCAGAGCACAAGCTGCCATTGATTTCGGACGCTGAGATTTTTTTTTAGCTTCTCGTTGATCGGTCTTCGCTGCTGTTACGGTCTGTCCGTTCCCGTTGTTTCACCATTCTGACAGCGACGTGGTTTTAACTGAACAGTGCTCTCCGATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATGTAACAGCATTTTCCGGCCTTTTTTATCTCTTTTTTTTGCACCAATCAATGATAAAGATATTTTGTGGCCGGCTTGTGTGCTGACTTGGTCGTGCCAATTCACGTGCAGGGCGCCGGTGAAATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCTACGGTAACAAACCTATCTGAATTCGAATTTCGACGTGAACTTTAAAAATTCGATGTAAATTCACACCCTGTTCATGCATGTTGGTGTGGTGAACGCGTGCGCAGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGCAGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGGCGCCGGCGCCGCCGACGTCGTCGTCGTTCCGGTCGGCGGTACGTGACTGTCGTGTCGTACACCACTGATTCCTCTGACTGATACGACGAGACACAGCAGTTACCTAGCTGTATGTCCTTTCTGATTAGTGACTAAACAGGCCATCTTTTTCTTCAGAAATTAACTTTCCCATTTTTTTTAGAGTGTGCGTCGCTTTCTCTGACAACTGTTTGCACACAAGCATGTCGGGAGAAGAGCACGAGCTGTCGTTTTATACGGCATGCAAATTACAGTAATGGTTAGGTGCATTGCATCCTCTTGCCTGCCCAAGCTTAGAGAAGATTATCCATAAACAGTTTGGTCGCTTAATTAATTATAAGCACAGAATAGGTTTTCTTGCGCTACATGGACACTGATTACGTACACAAGATTTAATAACCCTTGACTAACTCTGTATTTCTATCTGTGCCTGATAATCTGCAGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGAAGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCAACATTTTTGAATCTATTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATCAAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAGCCTGTAATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCGGGTGGCTATTAATTTGCCTAGCTAGAAATTGGCCAATTTAAAGTTTGGCCACACGTCAATTCTTATATGAATATGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAGTGAGG]

[+] EMBL AK069153             [AGCGTGCTCCTCCTCTCCTCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCGATGGCCGGCAAGAACGGGAGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGACGCCGACCTGCGCACCGCCTACCGCAAGCTCGCCATGGTACGGTGCTGATTCCTCTGCTTTGCTCTGTTTTTTTTTTTTTTTGCCGATTTAACCGTCTCCCAGTGGCTGTTTGTCTCCGGGCAGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGGTAATTAAATCTCAGCCACCTTCTTCGTCTTCCTCTGCTTCTGACCAGTGCTCAGAGCACAAGCTGCCATTGATTTCGGACGCTGAGATTTTTTTTTAGCTTCTCGTTGATCGGTCTTCGCTGCTGTTACGGTCTGTCCGTTCCCGTTGTTTCACCATTCTGACAGCGACGTGGTTTTAACTGAACAGTGCTCTCCGATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATGTAACAGCATTTTCCGGCCTTTTTTATCTCTTTTTTTTGCACCAATCAATGATAAAGATATTTTGTGGCCGGCTTGTGTGCTGACTTGGTCGTGCCAATTCACGTGCAGGGCGCCGGTGAAATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCTACGGTAACAAACCTATCTGAATTCGAATTTCGACGTGAACTTTAAAAATTCGATGTAAATTCACACCCTGTTCATGCATGTTGGTGTGGTGAACGCGTGCGCAGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGCAGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGGCGCCGGCGCCGCCGACGTCGTCGTCGTTCCGGTCGGCGGTACGTGACTGTCGTGTCGTACACCACTGATTCCTCTGACTGATACGACGAGACACAGCAGTTACCTAGCTGTATGTCCTTTCTGATTAGTGACTAAACAGGCCATCTTTTTCTTCAGAAATTAACTTTCCCATTTTTTTTAGAGTGTGCGTCGCTTTCTCTGACAACTGTTTGCACACAAGCATGTCGGGAGAAGAGCACGAGCTGTCGTTTTATACGGCATGCAAATTACAGTAATGGTTAGGTGCATTGCATCCTCTTGCCTGCCCAAGCTTAGAGAAGATTATCCATAAACAGTTTGGTCGCTTAATTAATTATAAGCACAGAATAGGTTTTCTTGCGCTACATGGACACTGATTACGTACACAAGATTTAATAACCCTTGACTAACTCTGTATTTCTATCTGTGCCTGATAATCTGCAGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGAAGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCAACATTTTTGAATCTATTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATCAAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAGCCTGTAATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCGGGTGGCTATTAATTTGCCTAGCTAGAAATTGGCCAATTTAAAGTTTGGCCACACGTCAATTCTTATATGAATATGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAGTGAGG]


>consensus_5615#0 AGCGTGCTCCTCCTCTCCTCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCG ATGGCCGGCAAGAACGGGAGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGAC GCCGACCTGCGCACCGCCTACCGCAAGCTCGCCATGGTACGGTGCTGATTCCTCTGCTTT GCTCTGTTTTTTTTTTTTTTTGCCGATTTAACCGTCTCCCAGTGGCTGTTTGTCTCCGGG CAGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAG GCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGGTAATTAAATCTCAGCC ACCTTCTTCGTCTTCCTCTGCTTCTGACCAGTGCTCAGAGCACAAGCTGCCATTGATTTC GGACGCTGAGATTTTTTTTTAGCTTCTCGTTGATCGGTCTTCGCTGCTGTTACGGTCTGT CCGTTCCCGTTGTTTCACCATTCTGACAGCGACGTGGTTTTAACTGAACAGTGCTCTCCG ATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATG TAACAGCATTTTCCGGCCTTTTTTATCTCTTTTTTTTGCACCAATCAATGATAAAGATAT TTTGTGGCCGGCTTGTGTGCTGACTTGGTCGTGCCAATTCACGTGCAGGGCGCCGGTGAA ATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCTACGGTAACAAACCTATCT GAATTCGAATTTCGACGTGAACTTTAAAAATTCGATGTAAATTCACACCCTGTTCATGCA TGTTGGTGTGGTGAACGCGTGCGCAGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGC AGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGGCGCCGGCGCCGCCGACGTCGTCGT CGTTCCGGTCGGCGGTACGTGACTGTCGTGTCGTACACCACTGATTCCTCTGACTGATAC GACGAGACACAGCAGTTACCTAGCTGTATGTCCTTTCTGATTAGTGACTAAACAGGCCAT CTTTTTCTTCAGAAATTAACTTTCCCATTTTTTTTAGAGTGTGCGTCGCTTTCTCTGACA ACTGTTTGCACACAAGCATGTCGGGAGAAGAGCACGAGCTGTCGTTTTATACGGCATGCA AATTACAGTAATGGTTAGGTGCATTGCATCCTCTTGCCTGCCCAAGCTTAGAGAAGATTA TCCATAAACAGTTTGGTCGCTTAATTAATTATAAGCACAGAATAGGTTTTCTTGCGCTAC ATGGACACTGATTACGTACACAAGATTTAATAACCCTTGACTAACTCTGTATTTCTATCT GTGCCTGATAATCTGCAGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGAAGA ACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCAACATTTTTGAATCTATTT CGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATCAAG AAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAGCCTGTAATC TCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCGGGTGGCTATTAATTTG CCTAGCTAGAAATTGGCCAATTTAAAGTTTGGCCACACGTCAATTCTTATATGAATATGT GCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAGTGAGG



consensusID : consensus_5615#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 878
fasta sequence
                              [TCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCGATGGCCGGCAAGAACGGGAGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGACGCCGACCTGCGCACCGCCTACCGCAAGCTCGCCATGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGTGCTCTCCGATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATGGCGCCGGTGAAATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCTACGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGCAGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGACGTCGTCGTCGTTCCGGTCGGCGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGAAGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCGAGATTTTTGAATCTATTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATCAAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAACCTGTAATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCAGGTGGCTATTAATTTGCCTAGCTAGAAATTGGCCAATTT-AAGTTTGGCCACACGTCAATTCTTATATGAATATGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAATGAGGGCTAATGATCAAAAAAAAAAGGAA]

[+] EMBL CB624094             [TCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCGATGGCCGGCAAGAACGGGAGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGACGCCGACCTGCGCACCGCCTACCGCAAGCTCGCCATGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGTGCTCTCCGATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATGGCGCCGGTGAAATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCTACGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGCAGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGACGTCGTCGTCGTTCCGGTCGGCGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGAAGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCGAGATTTTTGAATCTATTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATCAAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAACCTGTAATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCAGGTGGCTATTAATTTGCCTAGCTAGAAATTGGCCAATTT AAGTTTGGCCACACGTCAATTCTTATATGAATATGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAATGAGG                        ]
[-] EMBL CB624095             [                                                                                                                                               GCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGTGCTCTCCGATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATGGCGCCGGTGAAATTCTCGGCGACATTCTGGAGGCCATGAACAAAACCGGCCCTACGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGCAGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGACGTCGTCGTCGTTCCGGTCGGCGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGAAGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCGAGATTTTTGAATCTATTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATCAAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAACCTGTAATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCAGGTGGCTATTAATTTGCCTAGCTAGAAATTGGCCAATTTAAAGTTTGGCCACACGTCAATTCTTATATGAATATGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAATGAGGGCTAATGATCAAAAAAAAAAGGAA]


>consensus_5615#1 TCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCGATGGCCGGCAAGAACGGG AGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGACGCCGACCTGCGCACCGCC TACCGCAAGCTCGCCATGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCC GGCGGCGGTGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGTG CTCTCCGATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGAT GATGATGGCGCCGGTGAAATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCT ACGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGCAGAGGCAGTTCGAGGAGCTGTTC CTCCGGCCGCCGACGTCGTCGTCGTTCCGGTCGGCGCAAGAGGACGCTGGGAAGTCTTCA AAGAGAAGGGCCGGAAGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCG AGATTTTTGAATCTATTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAA TTAAGCTGATTGATCAAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTA GGGCAGTAACCTGTAATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATG CAGGTGGCTATTAATTTGCCTAGCTAGAAATTGGCCAATTTAAGTTTGGCCACACGTCAA TTCTTATATGAATATGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAAT GAAGAAAAATGAGGGCTAATGATCAAAAAAAAAAGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5615#0      AGCGTGCTCCTCCTCTCCTCCACACACAATCCGATCGGTAGCCGCGGGCTCGTTGTTGCG 60
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      ATGGCCGGCAAGAACGGGAGCCTCTACGCGGTGCTCGGCGTCGCCAGCGACTGCTCCGAC 120
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      GCCGACCTGCGCACCGCCTACCGCAAGCTCGCCATGGTACGGTGCTGATTCCTCTGCTTT 180
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      GCTCTGTTTTTTTTTTTTTTTGCCGATTTAACCGTCTCCCAGTGGCTGTTTGTCTCCGGG 240
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      CAGAAATGGCACCCGGACAAGTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGGTGCAGAG 300
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      GCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGGTAATTAAATCTCAGCC 360
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      ACCTTCTTCGTCTTCCTCTGCTTCTGACCAGTGCTCAGAGCACAAGCTGCCATTGATTTC 420
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      GGACGCTGAGATTTTTTTTTAGCTTCTCGTTGATCGGTCTTCGCTGCTGTTACGGTCTGT 480
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      CCGTTCCCGTTGTTTCACCATTCTGACAGCGACGTGGTTTTAACTGAACAGTGCTCTCCG 540
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      ATCCCAACAAGAGGATCCTCTATGACGTCGGAGCCTACGACAGCGACGGCGATGATGATG 600
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      TAACAGCATTTTCCGGCCTTTTTTATCTCTTTTTTTTGCACCAATCAATGATAAAGATAT 660
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      TTTGTGGCCGGCTTGTGTGCTGACTTGGTCGTGCCAATTCACGTGCAGGGCGCCGGTGAA 720
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      ATTCTCGGCGACATTCTCGAGGCCATGAACAAAACCGGCCCTACGGTAACAAACCTATCT 780
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      GAATTCGAATTTCGACGTGAACTTTAAAAATTCGATGTAAATTCACACCCTGTTCATGCA 840
consensus_5615#1      ------------------------------------------------------------
                                                                                  

consensus_5615#0      TGTTGGTGTGGTGAACGCGTGCGCAGGAGAATGGCAAGAACGAGAGCTTCGAAGACCTGC 900
consensus_5615#1      ---------------------------------------------TCCACACACAATCCG 15
                                                                    *  *  * *     

consensus_5615#0      AGAGGCAGTTCGAGGAGCTGTTCCTCCGGCCGCCGGCGCCGGCGCCGCCGACGTCGTCGT 960
consensus_5615#1      ATCGGTAGC-CGCGGGCTCGTTGTTGCGATGGCCGGC---AAGAACGGGAGCCTCTACGC 71
                      *  ** **  ** **    ***  * **   ******        **    * **  ** 

consensus_5615#0      CGTTCCGGTCGGCGGTACGTGACTGTCGTGTCGTACACCACTGATTCCTCTG--ACTGAT 1018
consensus_5615#1      GGTGCTCGGCGTCGCCA-GCGACTGCTCCGACGCCGACCTGCGCACCGCCTACCGCAAGC 130
                       ** *  * ** **  * * *****    * **   ***   *   *  **    *    

consensus_5615#0      ACGACGAGACACAGCAGTTACCTAGCTGTATGTCCTTTCTGATTAGTGACTAAACAGGCC 1078
consensus_5615#1      TCGCCATGAAATGGCACCCGGACAA--GTGCGGCGCCGCCGGGAGCTCAGCCGGCGGCGG 188
                       ** *  ** *  ***       *   **  * *    * *     * *     * *   

consensus_5615#0      ATCTTTTTCTTCAGAAATTAACTTTCCCATTTTTTTTAGAGTGTGCGTCGCTTTCTCTGA 1138
consensus_5615#1      TGCAGAGGCGGCCAAGGTGAGGTTCCAGAAGATCCAGGGAGCCTACGCCGTGCTCTCCGA 248
                        *     *  *  *  * *  ** *  *   *     ***  * ** **   **** **

consensus_5615#0      CAACTGTTTGCACACAAGCATGTCGGGAGAAGAGCACGAGCTGTCGTTTTATACGGCATG 1198
consensus_5615#1      T-----------CCCAA------CAAGAGGATCCTCTATGACGTCGGAGCCTACGACA-G 290
                                  * ***      *  *** *        *  ****     **** ** *

consensus_5615#0      CAAATTACAGTAATGGTTAGGTGCATTGCATCCTCTTGCCTGCCCAAGCTTAGAGAAGAT 1258
consensus_5615#1      CGA-CGGCGATGATGATGGCGCCGGTGAAATTCTCG-----GCGACATTCTCGAGG---- 340
                      * *    *  * *** *   *    *   ** ***      **   *   * ***     

consensus_5615#0      TATCCATAAACAGT-TTGGTCGCTTAATTAATTATAAGCACAGAATAGGTTTTCTTGCGC 1317
consensus_5615#1      ---CCATGAACAAAACCGGCCCTACGGAGAATGGCAAGAACGAGA---GCTTCGAAGACC 394
                         **** ****     ** *        ***   *** **   *   * **    *  *

consensus_5615#0      TACATGGACACTGATTACGTACACAAGATTTAATAACCCTTGACTAACTCTGTATTTCTA 1377
consensus_5615#1      TGCAGAGGCA--------GTTCG-AGGAGCTGTT--CCTCCGGCCGCCGACGTCGTCGT- 442
                      * **  * **        ** *  * **  *  *  **   * *   *   **  *  * 

consensus_5615#0      TCTGTGCCTGATAATCTGCAGCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGA 1437
consensus_5615#1      --CGTTCC----GGTCGGC-GCAAGAGGACGCTGGGAAGTCTTCAAAGAGAAGGGCCGGA 495
                         ** **      ** ** ****************************************

consensus_5615#0      AGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCAACATTTTTGAATCTA 1497
consensus_5615#1      AGAACGTAGAAGTACGTACTTTTGGCCGAAGATTTTTGTACTGCGAGATTTTTGAATCTA 555
                      ******************************************** * *************

consensus_5615#0      TTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATC 1557
consensus_5615#1      TTTCGTACGTGCAGTGCTCAAGACGACCGTCATTTGTGCTAATAATTAAGCTGATTGATC 615
                      ************************************************************

consensus_5615#0      AAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAGCCTGTA 1617
consensus_5615#1      AAGAAGAAAACGATTCAGATAATGATATGACGCACTGATGATCTAGGGCAGTAACCTGTA 675
                      ***************************************************** ******

consensus_5615#0      ATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCGGGTGGCTATTAAT 1677
consensus_5615#1      ATCTCAATAACACCTTTGGCAGACGTCATTCGGTTTGCATGTATGCAGGTGGCTATTAAT 735
                      ********************************************** *************

consensus_5615#0      TTGCCTAGCTAGAAATTGGCCAATTTAAAGTTTGGCCACACGTCAATTCTTATATGAATA 1737
consensus_5615#1      TTGCCTAGCTAGAAATTGGCCAATTTAA-GTTTGGCCACACGTCAATTCTTATATGAATA 794
                      **************************** *******************************

consensus_5615#0      TGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAGTGAGG 1797
consensus_5615#1      TGTGCAATATTGTCAAATCTGGGTACTTCTCCCTGATGAATTAAATGAAGAAAAATGAGG 854
                      ****************************************************** *****

consensus_5615#0      ------------------------
consensus_5615#1      GCTAATGATCAAAAAAAAAAGGAA 878
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)