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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5617#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1792 fasta sequence
[CGACTCAACCAAGCCAGGTTGAGGCGGCGCGGCGACCAAACCCCCACACCCGCAACCACCCACCACCCGCCGCCGATGCCCGGCGGGCCCTCCCGCGCCGCCGATGCGGACGACGACGACGACGACGAGCTCTCGCGCCTCCTCTCCCTGGCCGAGGCCGACCTCGAGGCCGGCCGCCTCCGCGCCGCGCACAAGCACGCCCGCCGCGCCGCCCGCCTCGACCCGGACTCCACCCGCGCCTCGCTCCTCCTCACCGCCGTCTCCGTCCTCGCCGCCGACGACTCCTCCCACCGCGCCACCCTCCTCCTCCCCGACTCCCCCCACTCCCAGGCCTCGCCCCTCTCACCCTCCGCCCTCCGCCGCCACTACAAATCCCTCTCCGAATCCCTCCGCTCCGCCCCGCCCTCCTCTTCCCCCGCCGTCTCCTCCGCCGTCAAGGAGGCGCTCCGCCGCGCCGCCGACGCCTACGCCGCGCTCGCCAACCAGGCCGCCGCCCCCGTCCCGCCCACCTTCTGGACGGCCTGCGCCGGCTGCCGCCTCCTCCATGAGTTCGACCGCAAGTACGTCGGATTCCGCCTCATGTGCCCCTCCTGCCGCCGCACCTTCCTCGCCTCCGAAGTGCCCCCTCCGCCGGAGGCTGAGGCGGAGGCGGAGCCAGACCCGCTGCCGCCGGCTAAGAAGAAGCCCAAAACCCAGAAGCGTGAGATGACGCTCGCCGAGATGTAGCTCCAGCTCTCCAAGAAAAGAGCAACCAACAACTCATCCAGACTCGACGAGGATGACGACGATGACAATGACGATGACGATGACGATGATGAGGGAGAGGAGCAGCAGCAGAACAACGACTCTGAGATGATGGATGTGGAGGACTCAGACTTCTACAACTTCGACGCCGACCGCTGCGAGAAGTGCTTCAAGAGAGGCCAGGTGTGGGCATTGTACGGTGATGATGACGGTATGCCTCGTCACTATGCGCTGGTGGAGATGATTACACCAGGGGGCCGATTCCGTGCACAGATAAGGTGGCTTGATCTCCAGCCAGATGGAGGGGAGGGGACGCCATGTGGGGAGTTCAAGGTCGGGAGAACGGTTACCGTGCATTCAGTGAACATCTTCTCGCATCAGGTCGCCTATGAGAGGGTGGCGAGGGAGGTGTACCGGATTTACCCCAAGAAGGGCTCGGTTTGGGCGCTCCATGGCGGAAAGGATGCCGATTCGGGGAGGCCAAAGTATGAGTTTGTGGTGTTCCTCAGTGGGTACAGTGACCTTTATGGTGCCAGCTTCGGCTACCTGGAGAAGGTGGAAGGTTTCAGGAGCATCTTTACCCGCCAGGATGTCGGTCGCGATGCTGTCCAGACC-CTTCACAAGGGAGATATGGGGAAACT-CTCGCATC-AGATTCCGGCGAGGAGAGCGCCCAAGGGTGAAGGCT-C-AACCCT-GCCTCCTACTGATTGCT-GGGAGCTTGACCCT-GC-ATCATT-GC-CTTCTGAGTTGCT-GC-AT-GACAAT-C-AGC-AGAAATAGCCGATGTGGTAACTTCGAGAAAGTATCTTAGCTGATAGGATTGTTCATACTGTAGAATTTGTCGGAGGTCATAGGTCTGTGGTGGTCTGCCTAGTGAAATGATCCGGTGATGCATTTGCTTCACCTGCTTTGGATGTATGTTCCTCCATGCTTATGGCTCCTCGTCAAGGTAGAGATTTAGATAGCGGGATACTTGTACCTGATGCTGTGTTCAATTCCACCATCAACAACTTTCAGTGCATGAAATGAATCATCTTTTGGTATGATGGTAAAAAAAAAA]
[+] EMBL AK063401 [CGACTCAACCAAGCCAGGTTGAGGCGGCGCGGCGACCAAACCCCCACACCCGCAACCACCCACCACCCGCCGCCGATGCCCGGCGGGCCCTCCCGCGCCGCCGATGCGGACGACGACGACGACGACGAGCTCTCGCGCCTCCTCTCCCTGGCCGAGGCCGACCTCGAGGCCGGCCGCCTCCGCGCCGCGCACAAGCACGCCCGCCGCGCCGCCCGCCTCGACCCGGACTCCACCCGCGCCTCGCTCCTCCTCACCGCCGTCTCCGTCCTCGCCGCCGACGACTCCTCCCACCGCGCCACCCTCCTCCTCCCCGACTCCCCCCACTCCCAGGCCTCGCCCCTCTCACCCTCCGCCCTCCGCCGCCACTACAAATCCCTCTCCGAATCCCTCCGCTCCGCCCCGCCCTCCTCTTCCCCCGCCGTCTCCTCCGCCGTCAAGGAGGCGCTCCGCCGCGCCGCCGACGCCTACGCCGCGCTCGCCAACCAGGCCGCCGCCCCCGTCCCGCCCACCTTCTGGACGGCCTGCGCCGGCTGCCGCCTCCTCCATGAGTTCGACCGCAAGTACGTCGGATTCCGCCTCATGTGCCCCTCCTGCCGCCGCACCTTCCTCGCCTCCGAAGTGCCCCCTCCGCCGGAGGCTGAGGCGGAGGCGGAGCCAGACCCGCTGCCGCCGGCTAAGAAGAAGCCCAAAACCCAGAAGCGTGAGATGACGCTCGCCGAGATGTAGCTCCAGCTCTCCAAGAAAAGAGCAACCAACAACTCATCCAGACTCGACGAGGATGACGACGATGACAATGACGATGACGATGACGATGATGAGGGAGAGGAGCAGCAGCAGAACAACGACTCTGAGATGATGGATGTGGAGGACTCAGACTTCTACAACTTCGACGCCGACCGCTGCGAGAAGTGCTTCAAGAGAGGCCAGGTGTGGGCATTGTACGGTGATGATGACGGTATGCCTCGTCACTATGCGCTGGTGGAGATGATTACACCAGGGGGCCGATTCCGTGCACAGATAAGGTGGCTTGATCTCCAGCCAGATGGAGGGGAGGGGACGCCATGTGGGGAGTTCAAGGTCGGGAGAACGGTTACCGTGCATTCAGTGAACATCTTCTCGCATCAGGTCGCCTATGAGAGGGTGGCGAGGGAGGTGTACCGGATTTACCCCAAGAAGGGCTCGGTTTGGGCGCTCCATGGCGGAAAGGATGCCGATTCGGGGAGGCCAAAGTATGAGTTTGTGGTGTTCCTCAGTGGGTACAGTGACCTTTATGGTGCCAGCTTCGGCTACCTGGAGAAGGTGGAAGGTTTCAGGAGCATCTTTACCCGCCAGGATGTCGGTCGCGATGCTGTCCAGACC CTTCACAAGGGAGATATGGGGAAACT CTCGCATC AGATTCCGGCGAGGAGAGCGCCCAAGGGTGAAGGCT C AACCCT GCCTCCTACTGATTGCT GGGAGCTTGACCCT GC ATCATT GC CTTCTGAGTTGCT GC AT GACAAT C AGC AGAAATAGCCGATGTGGTAACTTCGAGAAAGTATCTTAGCTGATAGGATTGTTCATACTGTAGAATTTGTCGGAGGTCATAGGTCTGTGGTGGTCTGCCTAGTGAAATGATCCGGTGATGCATTTGCTTCACCTGCTTTGGATGTATGTTCCTCCATGCTTATGGCTCCTCGTCAAGGTAGAGATTTAGATAGCGGGATACTTGTACCTGATGCTGTGTTCAATTCCACCATCAACAACTTTCAGTGCATGAAATGAATCATCTTTTGG ]
[+] EMBL BI802597 [ GGA GCCAAAGTATGAGTTT T GTGTTCCTCAGTGGGTACAGTGACCTTTATGGT CCAGCTTCGGCTACCTGGAGAAGGTGGAAGGTTTCAGGAGCATCTTTACCCGCCAGGATGTC GTCGCGATGCTGTCCAGACCACTTCACAAGGGAGATATGGGGAAACTGCTCGCATCAAGATTCCGGCGAGGAGAGCGCCCAAGGGTGAAGGCTGCAAACCCTGGCCTCCTACTGATTGCTGGGGAGCTTGACCCTGGCAATCATTGGCACTTCTGAGTTGCTGGCAATGGACAATGCAAGCAAGAAATAGCCGATGTGGTAACTTCGAGGAAGTATCTTAGCTGATAGGATTGTTCATACTGTAGAATTTGTCGGAGGTCATAGGTCTGTGGTGGTCTGCCTAGTGAAATGATCCGGTGATGCATTTGCTTCACCTGCTTTGGATGTATGTTCCTCCATGCTTATGGCTCCTCGTCCAAGTAGAGATTTAGATAGCGGGATACTTGTACCTGAT CTGTGTTCAATTCCACCATCAACAAC TCCAGTGCATGAAAGGAATCATCTTTTGGTATGATGGTAAAAAAAAAA]
[-] EMBL BU666976 [ TGCTGTCCAGACC CTTCACAAGGGAGATATGGGGAAACT CTCGCATC AGATTCCGGCGAGGAGAGCGCCCAAGGGTGAAGGCT C AACCCT GCCTCCTACTGATTGCT GGGAGCTTGACCCT GC ATCATT GC CTTCTGAGTTGCT GC AT GACAAT C AGC AGAAATAGCCGATGTGGTAACTTCGAGAAAGTATCTTAGCTGATAGGATTGTTCATACTGTAGAATTTGTCGGAGGTCATAGGTCTGTGGTGGTCTGCCTAGTGAAATGATCCGGTGATGCATTTGCTTCACCTGCTTTGGATGTATGTTCCTCCATGCTTATGGCTCCTCGTCAAGGTAGAGATTTAGATAGCGGGATACTTGTACCTGATGCTGTG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||