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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5634 cluster # 5634       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5634#0 length = 913 sequences # 3  

consensusID : consensus_5634#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 913
fasta sequence
                              [TTTTTTGATATGAATGATATTTTTATTTTAAATGATATCATAAACACTCTGGGTCTTTTAGAACTCCCTATTAAAGTTTTAGAACTCCCTATTAAAGGAAGAGCCTTTACTTGGAGTAATATGCAACAATATCCCCTTTTGGAACAACTGGATTGATTCTTTACCTCTCCAAATTGGACTCTTCTTATCCTAATACAACAGTCATTCCTTTGCCAAGAGTAATTTATGACCATGTCCCTTGTGTTGTTAAGATCAAAACAAAAATCCCGAAGTGTAATATTTTCCGTTTTGAGAATTATTGGGTTGATGTTGATGGTTTCTTTGAAAGAGTGGCTTCTATTTGGTCGATTGATCCTGGTTTTAAAGATCTTGCAAAATGCATCTCGTATAAGGCCCTTTCCAAATGGAGTAAAAATCTTTTGCTCCTCAATAAGTTGATAGAAAACAGCTGTAGAGTGATTCACTTCATGGACCTTGCTCCAACGCAAATAAATCCGAGATAGGCAACCTGATTATCCGATTCTCGAAATAT-ACAGGCTGTCAATGCTTTTCCTTTTTCTTTTCTTTTTCTCTCTCCTTCTCTCGTCTTCTTCTTCCTCTCTTCTTCTCCTTCTTCCTGCCGGTTACAGAGGAGAGGGAGAGAGTGGGCGCCGGTTTTCCGGCGGTTGGAAGGCGGCGACGTCAGCGGCCACACATGTTCCCGAGCAAGACACACCCGGGGAGGGCGGTGGCTGTTGGAGAGAGTGAAGGAGTTGGCCGGAACGGCGCAGTCAAGAGCTTGTCTTCGGCGGCAAAGAGAGGTGGCAGTGGTGGTTGCTATGGGGTGGGGGAGAAGGGGGAAACAGGAAAAATGGGCTCGCCGGAGCGAGGCGAAGCCGATGTTGCAAGGAAACTAGGAGGGAAGCTATAGGGG]

[+] EMBL CF317049             [TTTTTTGATATGAATGATATTTTTATTTTAAATGATATCATAAACACTCTGGGTCTTTTAGAACTCCCTATTAAAGTTTTAGAACTCCCTATTAAAGGAAGAGCCTTTACTTGGAGTAATATGCAACAATATCCCCTTTTGGAACAACTGGATTGATTCTTTACCTCTCCAAATTGGACTCTTCTTATCCTAATACAACAGTCATTCCTTTGCCAAGAGTAATTTATGACCATGTCCCTTGTGTTGTTAAGATCAAAACAAAAATCCCGAAGTGTAATATTTTCCGTTTTGAGAATTATTGGGTTGATGTTGATGGTTTCTTTGAAAGAGTGGCTTCTATTTGGTCGATTGATCCTGGTTTTAAAGATCTTGCAAAATGCATCTCGTATAAGGCCCTTTCCAAATGGAGTAAAAATCTTTTGCTCCTCAATAAGTTGATAGAAAACAGCTGTAGAGTGATTCACTTCATGGACCTTGCTCCAACGCAAATAAATCCGAGATAGGCAACCTGATTATCCGATTCTCGAAATAT ACAGGCTGTCAATGCTTTTCCTTT                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF317048             [                                                                                                                                                                                                                                                                                                                                                                                          GCATCTCGTATAAGGCCCTTTCCAAATGGAGTAAAAATCTTTTGCTCCTCAATAAGTTGATAGAAAACAGCTGTAGAGTGATTCACTTCATGGACCTTGCTCCAACGCAAATAAATCCGAGATAGGCAACCTGATTATCCGATTCTCGAAATATCACAGGCTGTCAATGCTTTTCCTTTTTCTTTTCTTTTTCTCTCTCCTTCTCTCGTCTTCTTCTTCCTCTCTTCTTCTCCTTCTTCCTGCCGGTTACAGAGGAGAGGGAGAGAGTGGGCGCCGGTTTTCCGGCGGTTGGAAGGCGGCGACGTCAGCGGCCACACATGTTCCCGAGCAAGACACACCCGGGGAGGGCGGTGGCTGTTGGAGAGAGTGAAGGAGTTGGCCGGAACGGCGCAGTCAAGAGCTTGTCTTCGGCGGCAAAGAGAGGTGGCAGTGGTGGTTGCTATGGGGTGGGGGAGAAGGGGGAAACAGGAAAAATGGGCTCGCCGGAGCGAGGCGAAGCCGATGTTGCAAGGAAACTAGGAGGGAAGCTATAGGGG]
[-] EMBL CF318503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGAGCAAAACACACCCGGGGAGGGCGGTGGCTGTTGAATAGAGTGAAGGAGTTGGCCGGAACGGCGCAGTCAAGAGCTTGTCTTCGGCGGCAAAGAGAGGTGGCAGTGGTGGTTGCTATGGGGTGGGGGAGAAGGGGGAAACAGGAAAAATGGGCTCGCCGGAGCGAGGCGAAGCCGATGTTGCAAGGAAACTAGGAGGGAAGCTATAGGGG]


>consensus_5634#0 TTTTTTGATATGAATGATATTTTTATTTTAAATGATATCATAAACACTCTGGGTCTTTTA GAACTCCCTATTAAAGTTTTAGAACTCCCTATTAAAGGAAGAGCCTTTACTTGGAGTAAT ATGCAACAATATCCCCTTTTGGAACAACTGGATTGATTCTTTACCTCTCCAAATTGGACT CTTCTTATCCTAATACAACAGTCATTCCTTTGCCAAGAGTAATTTATGACCATGTCCCTT GTGTTGTTAAGATCAAAACAAAAATCCCGAAGTGTAATATTTTCCGTTTTGAGAATTATT GGGTTGATGTTGATGGTTTCTTTGAAAGAGTGGCTTCTATTTGGTCGATTGATCCTGGTT TTAAAGATCTTGCAAAATGCATCTCGTATAAGGCCCTTTCCAAATGGAGTAAAAATCTTT TGCTCCTCAATAAGTTGATAGAAAACAGCTGTAGAGTGATTCACTTCATGGACCTTGCTC CAACGCAAATAAATCCGAGATAGGCAACCTGATTATCCGATTCTCGAAATATACAGGCTG TCAATGCTTTTCCTTTTTCTTTTCTTTTTCTCTCTCCTTCTCTCGTCTTCTTCTTCCTCT CTTCTTCTCCTTCTTCCTGCCGGTTACAGAGGAGAGGGAGAGAGTGGGCGCCGGTTTTCC GGCGGTTGGAAGGCGGCGACGTCAGCGGCCACACATGTTCCCGAGCAAGACACACCCGGG GAGGGCGGTGGCTGTTGGAGAGAGTGAAGGAGTTGGCCGGAACGGCGCAGTCAAGAGCTT GTCTTCGGCGGCAAAGAGAGGTGGCAGTGGTGGTTGCTATGGGGTGGGGGAGAAGGGGGA AACAGGAAAAATGGGCTCGCCGGAGCGAGGCGAAGCCGATGTTGCAAGGAAACTAGGAGG GAAGCTATAGGGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)