cluster # 5645

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5645 cluster # 5645 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5645#0 length = 602 sequences # 3

consensusID : consensus_5645#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 602
fasta sequence

                              [GCTCCCCAAGATCGGTCCTCTGGGTCTGTCGTCCCAAGAAGGTCGGAGAAGATATTGCCAAGGCACACCGGCGACTGGAAGGGTCTCCGTGTCACCGTCAAGCTCACCATCCAGAACCGTCAGGCC-CCGTCTCGGTCGTGCCTACCGCCTCGTCGCTCATCATCAGGGCTCTCAAGGAGCCCCCACGTGACCGTAAGAAGGAGAAGAACATCAAGCACAATAAGTCGGTCGCCCTCGACGAGATCATTGAGATCGCTAGGACGATGAAGTTCAAGTCCTTCTCCAAGGACCTTGCTGGTGTCGTCAAGGAGATTCTCGGAACCGCCTACAGTGTCGGTTGC-CAGGTTGACGGAAAGAGCCCGCGTGAGATCACCGACGCCATCAATGCTGGCGAGATTGATATCCCCGAGGAGTAAGCGTTATGACACTGGGCGACTTGGTTTTTTTCTAGGGCATCGGTTGGAGTTCGGGCTTGCTTTGGGACTGAAATGTCCACCCGCGCCAAACAAAATGGGTTTCCTCACGACGTTTCGGGTTTCTGAAATAACGAATGCTGAACAGAACATGACCTGGTCCAGACAGGTTTTTGTGCCGAAAAAAAA]

[+] EMBL BM420098             [GCTCCCCAAGATCGGTCCTCTGGGTCTGTCGTCCCAAGAAGGTCGGAGAAGATATTGCCAAGGCACACCGGCGACTGGAAGGGTCTCCGTGTCACCGTCAAGCTCACCATCCAGAACCGTCA GCC CCGTCTCGGTCGTGCCTACCGCCTCGTCGCTCATCATCAGGGCTCTCAAGGAGCCCCCACGTGACCGTAAGAAGGAGAAGAACATCAAGCAC ATAAGTCGGTCGCCCTCGACGAGATCATTGAGATCGCTAGGACGATGAAGTTCAAGTCCTTCTCCAAGGACCTTGCTGGTGTCGTCAAGGAGATTCTCGGAACCGCCTACAGTGTCGGTTGCACAGGTTGACGGAAAGAGCCCGCGTGAGATCACCGACGCCATCAATGCTGGCGAGATTGATATCCCCGAGGAGTAAGCGTTATGACACTGGGCGACTTGGTTTTTTTCTAGGGCATCGGTTGGAGTTCGGGCTTGCTTTGGGACTGAAATGTCCACCCGCGCCAAACAAAATGGGTTTCCTCACGACGTTTCGGGTTTCTGAAATAACGAATGCTGAACAGAACATGACCTGGTCCAGACAGGTTTTTGTGCCGAAAAAAAA]
[+] EMBL BM420099             [                                                                            GGAAGGGTCTCCGTGTCACCGTCAAGCTCACCATCCAGAACCGTCAGGCCGCCGTCTCGGTCGTGCCTACCGCCTCGTCGCTCATCATCAGGGCTCTCAAGGAGCCCCCACGTGACCGTAAGAAGGAGAAGAACATCAAGCACAATAAGTCGGTCGCCCTCGACGAGATCATTGAGATCGCTAGGACGATGAAGTTCAAGTCCTTCTCCAAGGACCTTGCTGGTGTCGTCAAGGAGATTCTCGGAACCGCCTACAGTGTCGGTTGC CAGGTTGACGGAAAGAGCCCGCGTGAGATCACCGACGCCATCAATGCTGGCGAGATTGATATCCCCGAGGAGTAAGCGTTATGACACTGGGCGACTTGGTTTTTTTCTAGGGCATCGGTTGGAGTTCGGGCTTGCTTTGGGACTGAAATGTCCACCCGC    AAC AAATGGGTTTCCTCACGACGTTTCGGGTTTCTGAAATAACGAATGCTGAACAGAACATGACCTGGTCCAGACAGGTTTTTGTGCCGAAAAAAAA]
[+] EMBL BM420106             [                                                                                                       TCACCATCCAGAACCGTCAGGCC CCGTCTCGGTCGTGCCTACCGCCTCGTCGCTCATCATCAGGGCTCTCAAGGAGCCCCCACGTGACCGTAAGAAGGAGAAGAACATCAAGCACAATAAGTCGGTCGCCCTCGACGAGATCATTGAGATCGCTAGGACGATGAAGTTCAAGTCCTTCTCCAAGGACCTTGCTGGTGTCGTCAAGGAGATTCTCGGAACCGCCTACAGTGTCGGTTGC CAGGTTGACGGAAAGAGCCCGCGTGAGATCACCGACGCCATCAATGCTGGCGAGATTGATATCCCCGAGGAGTAAGCGTTATGACA TGGGCGACTTGGTTTTTTTCTAGGGCATCGGTTGGAGTTCGGGCTTGCTTTGGGACTGAAATGTCCAGCCGCGGCAAACAAAATGGGTTTCCTCACGACGTTTCGGGTTTCTGAAATAACGAATGCTGAACAGAACATGACCTGGTCCAGACAGGTTTTTGTGCCGAAAAAAAA]




>consensus_5645#0
GCTCCCCAAGATCGGTCCTCTGGGTCTGTCGTCCCAAGAAGGTCGGAGAAGATATTGCCA
AGGCACACCGGCGACTGGAAGGGTCTCCGTGTCACCGTCAAGCTCACCATCCAGAACCGT
CAGGCCCCGTCTCGGTCGTGCCTACCGCCTCGTCGCTCATCATCAGGGCTCTCAAGGAGC
CCCCACGTGACCGTAAGAAGGAGAAGAACATCAAGCACAATAAGTCGGTCGCCCTCGACG
AGATCATTGAGATCGCTAGGACGATGAAGTTCAAGTCCTTCTCCAAGGACCTTGCTGGTG
TCGTCAAGGAGATTCTCGGAACCGCCTACAGTGTCGGTTGCCAGGTTGACGGAAAGAGCC
CGCGTGAGATCACCGACGCCATCAATGCTGGCGAGATTGATATCCCCGAGGAGTAAGCGT
TATGACACTGGGCGACTTGGTTTTTTTCTAGGGCATCGGTTGGAGTTCGGGCTTGCTTTG
GGACTGAAATGTCCACCCGCGCCAAACAAAATGGGTTTCCTCACGACGTTTCGGGTTTCT
GAAATAACGAATGCTGAACAGAACATGACCTGGTCCAGACAGGTTTTTGTGCCGAAAAAA
AA

clustalw multiple alignements is not computed in this case