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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4092 fasta sequence
[CCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCGCTAACCCTAGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGCACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACGATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCAAGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGGATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTGGGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAGTCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTCCAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTATTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGCACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAAAGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAGCAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATAATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATCCTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACAGAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACGTTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGAAACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTCGCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTGAAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCTGTTTGAGCTAGTTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGAATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGACAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATGCAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATTGCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGCATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCAACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTAAGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGGGTGCAACTATTCGGACGGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTGAACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACATTTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAGTTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAGGCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAGATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTGCAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAAAAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATGCAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGGATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGAAGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAAAAAAGAGGCTCGGATTGACA-GCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGATGCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTTATGTAGCTAACC-AGTTTTGCTCCACCA-TGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTTGTAGCTCCCA-GGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACA-GTTGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTCAGCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCGTTCTGCTCCCAAAAAAAA]
[+] EMBL AK101050 [CCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCGCTAACCCTAGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGCACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACGATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCAAGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGGATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTGGGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAGTCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTCCAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTATTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGCACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAAAGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAGCAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATAATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATCCTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACAGAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACGTTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGAAACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTCGCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTGAAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCTGTTTGAGCTAGTTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGAATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGACAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATGCAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATTGCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGCATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCAACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTAAGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGGGTGCAACTATTCGGACGGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTGAACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACATTTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAGTTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAGGCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAGATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTGCAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAAAAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATGCAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGGATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGAAGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAAAAAAGAGGCTCGGATTGACA GCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGATGCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTTATGTAGCTAACC AGTTTTGCTCCACCA TGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTTGTAGCTCCCA GGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACA GTTGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTCAGCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCG ]
[+] EMBL BM420060 [ AGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGC AAAGAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAAAAAAGAGGCTCGGATTGACANGCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGATGCAGAACAACTTGGTATAATCTGCGCCGGATTCAACTAGTAGCGTCTTTTTTATGCAGCTAACCAAGTTTTGCTCCACCACTGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTTGTAGCTCCCACGGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACACGTTGCCCATTTTCAGCCCTATTATAATTCTGGAGCTAGGGGACACTGAGTTGTCACCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCGTTCTGCTCCCAAAAAAAA]
consensusID : consensus_5648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1378 fasta sequence
[TGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATCCTTTCTTACATTTTTGAATGTTTTTTTTCTTTTGTTTGTTGTCAAATAATTTGCTATCATTTAAAAGGGGAATTGCT]
[+] EMBL AK060242 [TGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATCCTTTCTTACATTTTTGAATGTTTTTTTTCTTTTGTTTGTTGTCAAATAATTTGCTATCATTTAAAAGGGGAATTGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5648#0 CCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCGCTAACCCT 60
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGC 120
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACG 180
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCA 240
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGG 300
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTG 360
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAG 420
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTC 480
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTA 540
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGC 600
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAA 660
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAG 720
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATA 780
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATC 840
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACA 900
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAG 960
consensus_5648#1 ----------------------------TGGCTACCTTCGTGGCTGTAACATGAAAAGAG 32
********************************
consensus_5648#0 GGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGG 1020
consensus_5648#1 GGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGG 92
************************************************************
consensus_5648#0 CAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGC 1080
consensus_5648#1 CAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGC 152
************************************************************
consensus_5648#0 TGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATA 1140
consensus_5648#1 TGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATA 212
************************************************************
consensus_5648#0 TAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAA 1200
consensus_5648#1 TAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAA 272
************************************************************
consensus_5648#0 AGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGAT 1260
consensus_5648#1 AGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGAT 332
************************************************************
consensus_5648#0 ATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTG 1320
consensus_5648#1 ATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTG 392
************************************************************
consensus_5648#0 CTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAG 1380
consensus_5648#1 CTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAG 452
************************************************************
consensus_5648#0 AAGCAGATGGTAATAACATATGCAACGCAAACACGTTGGAGAGCAATGATCATTCTTATT 1440
consensus_5648#1 AAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATT 512
********************************** *************************
consensus_5648#0 CTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATG 1500
consensus_5648#1 CTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATG 572
************************************************************
consensus_5648#0 AAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTAT 1560
consensus_5648#1 AAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTAT 632
************************************************************
consensus_5648#0 CAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTG 1620
consensus_5648#1 CAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTG 692
************************************************************
consensus_5648#0 AAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTG 1680
consensus_5648#1 AAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTG 752
************************************************************
consensus_5648#0 ATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACAC 1740
consensus_5648#1 ATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACAC 812
************************************************************
consensus_5648#0 TGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGG 1800
consensus_5648#1 TGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGG 872
************************************************************
consensus_5648#0 ATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAG 1860
consensus_5648#1 ATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAG 932
************************************************************
consensus_5648#0 GACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATT 1920
consensus_5648#1 GACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATT 992
************************************************************
consensus_5648#0 ACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCA 1980
consensus_5648#1 ACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCA 1052
************************************************************
consensus_5648#0 TTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAA 2040
consensus_5648#1 TTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAA 1112
************************************************************
consensus_5648#0 ATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTG 2100
consensus_5648#1 ATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTG 1172
************************************************************
consensus_5648#0 AGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAG 2160
consensus_5648#1 AGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAG 1232
************************************************************
consensus_5648#0 ATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATG 2220
consensus_5648#1 ATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATG 1292
************************************************************
consensus_5648#0 CAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGA 2280
consensus_5648#1 CAGAATATCCTTTCTTACATTTTT-------GAATGTTTTTTTTCTTTTGTTTGTTGTCA 1345
******** * * ** * * * * *** * * *
consensus_5648#0 AACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTC 2340
consensus_5648#1 AATAATTTGCTATCATTTAAAAGGGGAATTGCT--------------------------- 1378
** * * * * * * *** *** *
consensus_5648#0 GCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTG 2400
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCTGTTTGAGCTAG 2460
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGA 2520
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGA 2580
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATG 2640
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATT 2700
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGC 2760
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCA 2820
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTA 2880
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGG 2940
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GTGCAACTATTCGGACGGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTG 3000
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACAT 3060
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAG 3120
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAG 3180
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAG 3240
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTG 3300
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAA 3360
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATG 3420
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGG 3480
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGA 3540
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAG 3600
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 CCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCT 3660
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAA 3720
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AAAAGAGGCTCGGATTGACAGCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGAT 3780
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTTATGTAGCT 3840
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 AACCAGTTTTGCTCCACCATGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTT 3900
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 GTAGCTCCCAGGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACAGT 3960
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTCAGCATTGG 4020
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 ATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCGTTCTGC 4080
consensus_5648#1 ------------------------------------------------------------
consensus_5648#0 TCCCAAAAAAAA 4092
consensus_5648#1 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||