cluster # 5654

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Oryza sativa
cluster # 5654 cluster # 5654 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5654#0 length = 927 sequences # 3

consensusID : consensus_5654#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 927
fasta sequence

                              [AAGGCCTACAACCCCCAACACTGCATCCTCTCCCCTATCCGTCTTCATACTAACAAGAGTACGTNCAAGATTTCGTATCGATCGTATAGAGAGATCGAAGTCAGANAGAGAGAAGAGATTATAAGTNAATTTCGCCATGAGCAGCAGAAGGACTAGCGCA-NTAATCTTCTTGCGGTTGCCCTGCTGATCATCTCCTTGCTGTTGTTGCCTCTTCTTCACCTTCCCGTTGCCCATGCTCGCCATGTTGCTGTNCTGAAGGCTACTGACAGTNCTAGTGCCANCAGCATCAGATCGGGACATGTGGAGCCCACNCCGGCGAGCGGAGCAGTGCAGAGGAGGCCAGCTAGCTCCGGTGCAAGTAACCGCGGCGGCGGCGGGCGGCGGCGGCGAGCGGCGGCAAGCAGCAGGAGTACGGTGGAGATGCGCGCGTCGGCGTGGGCGAAGCACCACCGCGACGAGGTCGCCAGGATGCACGAGATGCTGAAGAGGGACTACGCGTCCAAGGCGCGCCGCCGCTCGCCGATCAACAACGGCGAGCCGTCGCTGGAGGAGGAGGACCTGCCCTAACTAAGCTTCAGCTGCATATTCGTAGTGTAGTGTAGCGTAGCTTAGCTATAGCTCCTCTGAAAGATCTGAACTGACACACATAGGTAGTACATACAGTTATTACTAGAGCTGCTCTTTTAGTTAGCAAATTAGCAGGCAGGATAGTGTAGTTACTCCTATGGAATAACAGCCTTTGGTTTAGTATAGCATCCAAGCTGGGGCGTCATTTGTTAGCCCTGAGAGTCAGAGAGCCATGAACAAACAGTCTGAAACTGGGCAGTTTTGTCCCTGATGATGCTCATGCTTGGTGCTAGCTAAAGCTTTTAGCTAGCTTCACCCTGTAACATACATAAATGTGCACCAGTGTGTCAGGTTTGCAGT]

[+] EMBL AU032298             [AAGGCCTACAACCCCCAACACTGCATCCTCTCCCCTATCCGTCTTCATACTAACAAGAGTACGTNCAAGATTTCGTATCGATCGTATAGAGAGATCGAAGTCAGANAGAGAGAAGAGATTATAAGTNAATTTCGCCATGAGCAGCAGAAGGACTAGCGCA NTAATCTTCTTGCGGTTGCCCTGCTGATCATCTCCTTGCTGTTGTTGCCTCTTCTTCACCTTCCCGTTGCCCATGCTCGCCATGTTGCTGTNCTGAAGGCTACTGACAGTNCTAGTGCCANCAGCATCAGATCGGGACATGTGGAGCCCACNCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK073154             [                                      CCGTCTTCATACTAACAAGAGTACGTACAAGATTTCGTATCGATCGTATAGAGAGATCGAAGTCAGAAAGAGAGAAGAGATTATAAGTTAATTTCGCCATGAGCAGCAGAAGGACTAGCGCAGCTAATCTTCTTGCGGTTGCCCTGCTGATCATCTCCTTGCTGTTGTTGCCTCTTCTTCACCTTCCCGTTGCCCATGCTCGCCATGTTGCTGTGCTGAAGGCTACTGACAGTTCTAGTGCCATCAGCATCAGATCGGGACATGTGGAGCCCACCCCGGCGAGCGGAGCAGTGCAGAGGAGGCCAGCTAGCTCCGGTGCAAGTAACCGCGGCGGCGGCGGGCGGCGGCGGCGAGCGGCGGCAAGCAGCAGGAGTACGGTGGAGATGCGCGCGTCGGCGTGGGCGAAGCACCACCGCGACGAGGTCGCCAGGATGCACGAGATGCTGAAGAGGGACTACGCGTCCAAGGCGCGCCGCCGCTCGCCGATCAACAACGGCGAGCCGTCGCTGGAGGAGGAGGACCTGCCCTAACTAAGCTTCAGCTGCATATTCGTAGTGTAGTGTAGCGTAGCTTAGCTATAGCTCCTCTGAAAGATCTGAACTGACACACATAGGTAGTACATACAGTTATTACTAGAGCTGCTCTTTTAGTTAGCAAATTAGCAGGCAGGATAGTGTAGTTACTCCTATGGAATAACAGCCTTTGGTTTAGTATAGCATCCAAGCTGGGGCGTCATTTGTTAGCCCTGAGAGTCAGAGAGCCATGAACAAACAGTCTGAAACTGGGCAGTTTTGTCCCTGATGATGCTCATGCTTGGTGCTAGCTAAAGCTTTTAGCTAGCTTCACCCTGTAACATACATAAATGTGCACCAGTGTGTCAGGTTTGCAGT]
[+] EMBL AU032299             [                                                                                                                                                                                                                                                                                                                                                                                                    CGAGCGGCGGCAAGCAGCAGGAGTACGGTGGAGATGCGCGCGTCGGCNTGGGCGAAGCACCACCGCGACGAGGTCGCCAGGATGCACGAGATGCTGAAGAGGGACTACGCGTCCAAGGCGCGCCGCCGCTCGCCGATCAACAACGGCGAGCCGTCGCTGGAGGAGGAGGACCTGCCCTAACTAAGCTTCAGCTGCATATTCGTAGTGTAGTGTAGCGTAGCTTAGCTATAGCTCCTCTGAAAGATCTGAACTGACACACATAGGTAGTACATACAGTTATTACTAGAGCTGCTCTTTTAGTTAGCAAATTAGCAGGCAGGATAGTGTAGTTACTCCTATGGAATAACAGCCTTTGGTTTAGTATAGCATCCAAGCTGGGNNGTCATTTGTTAGCCCTGAGAGTCAGAGAGCCATGAACAAACAGTCTGAAACTGGGCAGTTTTGTCCCTGATGATGCTCATGCTTGGTGCTANNTAAAGCTTTTAGCTANNTTCACCCTG AACATAaaaa                             ]




>consensus_5654#0
AAGGCCTACAACCCCCAACACTGCATCCTCTCCCCTATCCGTCTTCATACTAACAAGAGT
ACGTNCAAGATTTCGTATCGATCGTATAGAGAGATCGAAGTCAGANAGAGAGAAGAGATT
ATAAGTNAATTTCGCCATGAGCAGCAGAAGGACTAGCGCANTAATCTTCTTGCGGTTGCC
CTGCTGATCATCTCCTTGCTGTTGTTGCCTCTTCTTCACCTTCCCGTTGCCCATGCTCGC
CATGTTGCTGTNCTGAAGGCTACTGACAGTNCTAGTGCCANCAGCATCAGATCGGGACAT
GTGGAGCCCACNCCGGCGAGCGGAGCAGTGCAGAGGAGGCCAGCTAGCTCCGGTGCAAGT
AACCGCGGCGGCGGCGGGCGGCGGCGGCGAGCGGCGGCAAGCAGCAGGAGTACGGTGGAG
ATGCGCGCGTCGGCGTGGGCGAAGCACCACCGCGACGAGGTCGCCAGGATGCACGAGATG
CTGAAGAGGGACTACGCGTCCAAGGCGCGCCGCCGCTCGCCGATCAACAACGGCGAGCCG
TCGCTGGAGGAGGAGGACCTGCCCTAACTAAGCTTCAGCTGCATATTCGTAGTGTAGTGT
AGCGTAGCTTAGCTATAGCTCCTCTGAAAGATCTGAACTGACACACATAGGTAGTACATA
CAGTTATTACTAGAGCTGCTCTTTTAGTTAGCAAATTAGCAGGCAGGATAGTGTAGTTAC
TCCTATGGAATAACAGCCTTTGGTTTAGTATAGCATCCAAGCTGGGGCGTCATTTGTTAG
CCCTGAGAGTCAGAGAGCCATGAACAAACAGTCTGAAACTGGGCAGTTTTGTCCCTGATG
ATGCTCATGCTTGGTGCTAGCTAAAGCTTTTAGCTAGCTTCACCCTGTAACATACATAAA
TGTGCACCAGTGTGTCAGGTTTGCAGT

clustalw multiple alignements is not computed in this case