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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5668 cluster # 5668       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5668#0 length = 987 sequences # 3  

consensusID : consensus_5668#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 987
fasta sequence
                              [GCGCACCGGTGGGTTGGCCCCGCGCGGAGCATCTCGCAGCTCGTCAAGACCAACGGCCGCCGCGCCTTCCTCGTCGACACCCTCGCCCTGGTGAGGAAGCTGGAGTCGCAGGGCGTGCCCACGAAGCAGGCGGAGGCGATCACCTCCGCGATCACGGAGGTCCTCAACGACAGCCTCGAGAGCATCTCCGAGTCCTTCGTCTCCAAGGCCGAGATGCAGAAGGCTGAGATGCTGCAGGAGTCCAATATCTCCAAGTTCAAGTCGCAAGTGCAGAGCTCGCAGGAAAACCATTTCTCTTTGTTGCAGCGTGAGACTGAGAAACTCCGTGGAGATATTGATAAGATGAGGAGTGAACTGAAGTATGAGATTGACAAGGTCACTGCAGGTCAGCGGCTGGATCTAAACCTCGAAAGAGGGCGCATCCGTGATGAACTCGCCAAGCAGAATGAGGAAACTACAGAACTCACCACAAAGCTAGACAAGGAAATTCACTCACTGAAAGCCCAGCTCGAGGCAGCAAAGTATGATGTCATCAAGTACTGCATAGGTACCATTGTTTCGATATCAGCTGTTGGACTCGCCGTGCTCCGCATTGTGATGTGAAGCACAGATACGTTCTTTCCTTTACCCATTCATCCATGGAAACTGCAAGAAAGAGGATAGGTTGTGATTCTGTTCCTAGTTTTTTTGGAGGGGACAAAACGTGGTCAGGGGAAATGTTGTACCATCATCCTATTAGGGAGGAGAAAAGAGGTGGTTCCTCAAAACTTGTAAAAATAGATCGACCCGCAGGAGAAATGCAGCAACCAAAAATGATTCTTTTACCTTTGTGTTTGTTGGAGCTTCTGATATTTGGTCAACATATGCTTCCTTTGTCTGTGAGACAGTGGGAGCCCNCTTGTCCCCTTAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK072606             [GCGCACCGGTGGGTTGGCCCCGCGCGGAGCATCTCGCAGCTCGTCAAGACCAACGGCCGCCGCGCCTTCCTCGTCGACACCCTCGCCCTGGTGAGGAAGCTGGAGTCGCAGGGCGTGCCCACGAAGCAGGCGGAGGCGATCACCTCCGCGATCACGGAGGTCCTCAACGACAGCCTCGAGAGCATCTCCGAGTCCTTCGTCTCCAAGGCCGAGATGCAGAAGGCTGAGATGCTGCAGGAGTCCAATATCTCCAAGTTCAAGTCGCAAGTGCAGAGCTCGCAGGAAAACCATTTCTCTTTGTTGCAGCGTGAGACTGAGAAACTCCGTGGAGATATTGATAAGATGAGGAGTGAACTGAAGTATGAGATTGACAAGGTCACTGCAGGTCAGCGGCTGGATCTAAACCTCGAAAGAGGGCGCATCCGTGATGAACTCGCCAAGCAGAATGAGGAAACTACAGAACTCACCACAAAGCTAGACAAGGAAATTCACTCACTGAAAGCCCAGCTCGAGGCAGCAAAGTATGATGTCATCAAGTACTGCATAGGTACCATTGTTTCGATATCAGCTGTTGGACTCGCCGTGCTCCGCATTGTGATGTGAAGCACAGATACGTTCTTTCCTTTACCCATTCATCCATGGAAACTGCAAGAAAGAGGATAGGTTGTGATTCTGTTCCTAGTTTTTTTGGAGGGGACAAAACGTGGTCAGGGGAAATGTTGTACCATCATCCTATTAGGGAGGAGAAAAGAGGTGGTTCCTCAAAACTTGTAAAAATAGATCGACCCGCAGGAGAAATGCAGCAACCAAAAATGATTCTTTTACCTTTGTGTTTGTTGGAGCTTCTGATA                                                                                                                                        ]
[+] EMBL CB000121             [                                                                                                                              CAGGCGGAGGCGATCACCTCCGCGATCACGGACCCTTTCAACGACAGCCTCGAGAGCATCTCCGAGTCCTTCGTCTCCAAGGCCGAGATGCAGAAGGCTGAGATGCTGCAGGAGTCCAATATCTCCAAGTTCAAGTCGCAAGTGCAGAGCTCGCAGGAAAACCATTTCTCTTTGTTGCAGCGTGAGACTGAGAAACTCCGTGGAGATATTGATAAGATGAGGAGTGAACTGAAGTATGAGATTGACAAGGTCACTGCAGGTCAGCGGCTGGATCTAAACCTTGAAAGAGGGCGCATCCGTGATGAACTCGCCAAGCAGAATGAGGAAACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU092770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAACCAAAAATGATTCTTTTNCCTTTGTGTTTGTTGGNGCTTCTGATATTTGGTCAACATATGCTTCCTTTGTCTGTGAGACAGTGGGAGCCCNCTTGTCCCCTTAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_5668#0 GCGCACCGGTGGGTTGGCCCCGCGCGGAGCATCTCGCAGCTCGTCAAGACCAACGGCCGC CGCGCCTTCCTCGTCGACACCCTCGCCCTGGTGAGGAAGCTGGAGTCGCAGGGCGTGCCC ACGAAGCAGGCGGAGGCGATCACCTCCGCGATCACGGAGGTCCTCAACGACAGCCTCGAG AGCATCTCCGAGTCCTTCGTCTCCAAGGCCGAGATGCAGAAGGCTGAGATGCTGCAGGAG TCCAATATCTCCAAGTTCAAGTCGCAAGTGCAGAGCTCGCAGGAAAACCATTTCTCTTTG TTGCAGCGTGAGACTGAGAAACTCCGTGGAGATATTGATAAGATGAGGAGTGAACTGAAG TATGAGATTGACAAGGTCACTGCAGGTCAGCGGCTGGATCTAAACCTCGAAAGAGGGCGC ATCCGTGATGAACTCGCCAAGCAGAATGAGGAAACTACAGAACTCACCACAAAGCTAGAC AAGGAAATTCACTCACTGAAAGCCCAGCTCGAGGCAGCAAAGTATGATGTCATCAAGTAC TGCATAGGTACCATTGTTTCGATATCAGCTGTTGGACTCGCCGTGCTCCGCATTGTGATG TGAAGCACAGATACGTTCTTTCCTTTACCCATTCATCCATGGAAACTGCAAGAAAGAGGA TAGGTTGTGATTCTGTTCCTAGTTTTTTTGGAGGGGACAAAACGTGGTCAGGGGAAATGT TGTACCATCATCCTATTAGGGAGGAGAAAAGAGGTGGTTCCTCAAAACTTGTAAAAATAG ATCGACCCGCAGGAGAAATGCAGCAACCAAAAATGATTCTTTTACCTTTGTGTTTGTTGG AGCTTCTGATATTTGGTCAACATATGCTTCCTTTGTCTGTGAGACAGTGGGAGCCCNCTT GTCCCCTTAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)