cluster # 5671

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Oryza sativa
cluster # 5671 cluster # 5671 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5671#0 length = 658 sequences # 3

consensusID : consensus_5671#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 658
fasta sequence

                              [CATCAGCAGCAAGGGCGGCGACACGGCGCGTGTCCGCTCATGCAGATGCAGCGGCCGCCAATAATTGTCGGAGCAAAGGGCTAGCCGGGAGGCGC-GCACACCTCGTCACATGGCGTGTCCCCGAGCAGAGATGAGAGATGGTGAGGATGAGATGGCCCCCCGCGTCGTCTCCTCTACCGGCGCGCGCCCGCG--CGCTGCACGCAGGTAGCGCCATCCACATTCCTCGAGCCGCGCCGTGTCATGTGGAAACAGCGAGCGGCCACAACCCACCTCGTCGTGCTCCTCCTCCCGGTTTGGTTTCGTTTGGTTTGGTTTGTTTTCCTCTCCTCCGCTCGGACGCCGATCCGTCCCCGTGGCTCGCGGCAGAGTGTGTGACTCTGCACAGGACAGGATGGCCACCCTGCCAACCGTGTACTTGCTCTGGATATTTCTGGCTCCTCCGTCCTCCCGGAGCTCTCTCTCTCTCTC-GCTGCCTGTAGCTGTACTCCAAATTGTGTGACGACCAGGCCACCAGGGACCTGGTTTTCAGTTGCTGCTAATATAACAAAATATCACGTGGTAGGCTGGTGGATATAATTGCAGGGAGATGTATTTTATAAACCCTCTCCTTTTTCGAGGTGTTCGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK108260             [CATCAGCAGCAAGGGCGGCGACACGGCGCGTGTCCGCTCATGCAGATGCAGCGGCCGCCAATAATTGTCGGAGCAAAGGGCTAGCCGGGAGGCGC GCACACCTCGTCACATGGCGTGTCCCCGAGCAGAGATGAGAGATGGTGAGGATGAGATGGCCCCCCGCGTCGTCTCCTCTACCGGCGCGCGCCCGCG  CGCTGCACGCAGGTAGCGCCATCCACATTCCTCGAGCCGCGCCGTGTCATGTGGAAACAGCGAGCGGCCACAACCCACCTCGTCGTGCTCCTCCTCCCGGTTTGGTTTCGTTTGGTTTGGTTTGTTTTCCTCTCCTCCGCTCGGACGCCGATCCGTCCCCGTGGCTCGCGGCAGAGTGTGTGACTCTGCACAGGACAGGATGGCCACCCTGCCAACCGTGTACTTGCTCTGGATATTTCTGGCTCCTCCGTCCTCCCGGAGCTCTCTCTCTCTCTC GCTGCCTGTAGCTGTACTCCAAATTGTGTGACGACCAGGCCACCAGGGACCTGGTTTTCAGTTGCTGCTAATATAACAAAATATCACGTGGTAGGCTGGTGGATATAATTGCAGGGAGATGTATTTTATAAACCCTC                                                     ]
[+] EMBL AU070535             [                                                                   TCGGAGCAAAGGGCTAGCCGGGAGGCGCTGCACACCTCGTCACATGGCGTGTCCCCGAGCAGAGATGAGAGATGGTGAGGATGAGATGGCCCCCCGCGTCGTCTCCTCTACCGGCGCGCGCCCGCGNTNGNCG ACGCAGGTAGCGCCATCCACATTCCTCGAGCCGCGCCGTGTCATGTGGAAACAGCGAGCGGCCACAACCCACCTCGTCGTGCTCCTCCTCCCGGTTTGGTTTCGTTTGGTTTGGTTTGTTTTCCTCTCCTCCGCTCGGACGCCGATCCGTCCCCGTGGCTCGNGGCAGAGTGTGTGACTCTGCACAGGACAGGATNGCCACCCTGCCAACCGTGTACTTGCTCTGGATATTTCTGGCTCCTCCGTCGTCCCGGAGCTCTCTCTCTCTCTCGGCTGCCTGTAGCTGTACTCCAAAT                                                                                                                                                                      ]
[+] EMBL AU097101             [                                                                                                                                                                                                                                                                                                                                                CGGACGCCGATCCGTCCCCGTGGNTCGCGGCAGAGTGTGTGACTCTGCACAGGACAGGATGGCCACCNTGCCAACCGTGTACTTGCTCTGGATATTTCTGGCTCCTCCGTCCTCCCGGAGCTCTCTCTCTCTCTC GCTGCCTGTAGCTGTACTCCAAATTGTGTGACGACCAGGCCACCAGGGACCTGGTTTTCAGTTGCTGCTAATATAACAAAATATCATGTGGTAGGCTGGTGGATATAATTGCAGGGAGATGTATTTTATAAACCCTCTCCTTTTTCGAGGTGTTCGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_5671#0
CATCAGCAGCAAGGGCGGCGACACGGCGCGTGTCCGCTCATGCAGATGCAGCGGCCGCCA
ATAATTGTCGGAGCAAAGGGCTAGCCGGGAGGCGCGCACACCTCGTCACATGGCGTGTCC
CCGAGCAGAGATGAGAGATGGTGAGGATGAGATGGCCCCCCGCGTCGTCTCCTCTACCGG
CGCGCGCCCGCGCGCTGCACGCAGGTAGCGCCATCCACATTCCTCGAGCCGCGCCGTGTC
ATGTGGAAACAGCGAGCGGCCACAACCCACCTCGTCGTGCTCCTCCTCCCGGTTTGGTTT
CGTTTGGTTTGGTTTGTTTTCCTCTCCTCCGCTCGGACGCCGATCCGTCCCCGTGGCTCG
CGGCAGAGTGTGTGACTCTGCACAGGACAGGATGGCCACCCTGCCAACCGTGTACTTGCT
CTGGATATTTCTGGCTCCTCCGTCCTCCCGGAGCTCTCTCTCTCTCTCGCTGCCTGTAGC
TGTACTCCAAATTGTGTGACGACCAGGCCACCAGGGACCTGGTTTTCAGTTGCTGCTAAT
ATAACAAAATATCACGTGGTAGGCTGGTGGATATAATTGCAGGGAGATGTATTTTATAAA
CCCTCTCCTTTTTCGAGGTGTTCGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case