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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5672 cluster # 5672       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5672#0 length = 946 sequences # 3  

consensusID : consensus_5672#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 946
fasta sequence
                              [AACGCCGCCGCCCCGCTCCGCGCCGTCGTGCACCTGCTCCGCCTCGCCTCATCGTGTCCGCGGCCGGCGAGCAGATCGGCGGCGCGGTGAGCACGGTCCCCTCTTCTTCCTGAACTCGCCCTAGCCTGCTTCAGGCTTCCACCCCGTGCGGCCTCCTCGCGCGCACGGCCGGCCTCCATCGCTGCTCGAATCGAACTAAGGAACTGGTATCAGGCTGTTGGTGAGAATGGAACCAAAGCATTCAGCTGAAATGTCCAAGCATTTGGACAAGCAAAATCAAGCCCTAATGGAAACTTACCGAGCAATGTCCCACGAGTTGCATAAAGTTCAGGTGGAAGAAGAAACAATCATGCGCAAGTTATATGAGCTGATGTCTGCAGAAGGACTTCTTCCGAAGCGCAAGAAAGAAAGTCAAGCACAGAAAACTGGGAAATCAACTCAGGAAAACAAAGAGCTTGAACCGTAGGATGTAAACTGTGAATATTGATACGATACTCATCTTGATGCAATTAACGAGTTGAGCTGAAGAATCAGATGGTTACTATCTCCACGACATCCTATATCCCCACACCTTGGAATTTCCAAGTGATGGATTTACAGTAGATAATGTGTTCTAACTATAGATGTTAAGTGTGCTCCAGAGGCCAGAGCAATGCAAAACGAACAATTGAACCCTTGAATCGAATTGTTATGTGAGGAGCCAACAGCTGGCTAGAATCAGAAGTGTATTTTTCATCTGAGATTTCTATATTTTCATAGTATTAGTTTTGCTGTAGTGCTAGTTGTTCCCGATTTTTTGCTATCTGAGTTATAAATTACGCGGACTTGTATTCTTATGAAGTCTGACTTTTTGTATAAAAAAATGCTTAACATACCAAAGCACTGTAATATCGTCCTTGTACTTTTTCGCTTTTCTTCGAGCATTTATGGGAGATATATAGCATTC]

[+] EMBL CB646055             [AACGCCGCCGCCCCGCTCCGCGCCGTCGTGCACCTGCTCCGCCTCGCCTCATCGTGTCCGCGGCCGGCGAGCAGATCGGCGGCGCGGTGAGCACGGTCCCCTCTTCTTCCTGAACTCGCCCTAGCCTGCTTCAGGCTTCCACCCCGTGCGGCCTCCTCGCGCGCACGGCCGGCCTCCATCGCTGCTCGAATCGAACTAAGGAACTGGTATCAGGCTGTTGGTGAGAATGGAACCAAAGCATTCAGCTGAAATGTCCAAGCATTTGGACAAGCAAAATCAAGCCCTAATGGAAACTTACCGAGCAATGTCCCACGAGTTGCATAAAGTTCAGGTGGAAGAAGAAACAATCATGCGCAAGTTATATGAGCTGATGTCTGCAGAAGGACTTCTTCCGAAGCGCAAGAAAGAAAGTCAAGCACAGAAAACTGGGAAATCAACTCAGGAAAACAAAGAGCTTGAACCGTAGGATGTAAACTGTGAATATTGATACGATACTCATCTTGATGCAATTAACGAGTTGAGCTGAAGAATCAGATGGTTACTATCTCCACGACATCCTATATCCCCACACCTTGGAATTTCCAAGTGATGGATTTACAGTAGATAATGTGTTCTAACTATAGATGTTAAGTGTGCTCCAGAGGCCAGAGCAATGCAAAACGAACAATTGAACCCTTGAATCGAATTGTTATGTGAGGAGCCAACAGCTGGCTAGAATCAGAAGTGTATTTTTCATCTGAGATTTCTATATTTTCATAGTATTAGTTTTGCTGTAGTGCTAGTTGTTCCCGATTTT                                                                                                                                                      ]
[+] EMBL OS2010A              [                                            CGCCTCATCGTGTCCGCGGCCGGCGAGCAGATCGGCGGCGCGGTGAGCACGGTCCCCTCTTCTTCCTGAACTCGCCCTAGCCTGCTTCAGGCTTCCACCCCGTGCGGCCTCCTCGCGCGCACGGCCGGCCTCCATCGCTGCTCGAATCGAACTAAGGAACTGGTATCAGGCTGTTGGTGAGAATGGAACCAAAGCATTCAGCTGAAATGTCCAAGCATTTGGACAAGCAAAATCAAGCCCTAATGGAAACTTACCGAGCAATGTCCCACGAGTTGCATAAAGTTCAGGTGGCAGAAGAAACANTCATGCGCAAGTTATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB646056             [                                                                                                                                                                                                                ATCAGGCTGTTGGTGAGAATGGAACCAAAGCATTCAGCTGAAATGTCCAAGCATTTGGACAAGCAAAATCAAGCCCTAATGGAAACTTACCGAGCAATGTCCCACGAGTTGCATAAAGTTCAGGTGGAAGAAGAAACAATCATGCGCAAGTTATATGAGCTGATGTCTGCAGAAGGACTTCTTCCGAAGCGCAAGAAAGAAAGTCAAGCACAGAAAACTGGGAAATCAACTCAGGAAAACAAAGAGCTTGAACCGTAGGATGTAAACTGTGAATATTGATACGATACTCATCTTGATGCAATTAACGAGTTGAGCTGAAGAATCAGATGGTTACTATCTCCACGACATCCTATATCCCCACACCTTGGAATTTCCAAGTGATGGATTTACAGTAGATAATGTGTTCTAACTATAGATGTTAAGTGTGCTCCAGAGGCCAGAGCAATGCAAAACGAACAATTGAACCCTTGAATCGAATTGTTATGTGAGGAGCCAACAGCTGGCTAGAATCAGAAGTGTATTTTTCATCTGAGATTTCTATATTTTCATAGTATTAGTTTTGCTGTAGTGCTAGTTGTTCCCGATTTTTTGCTATCTGAGTTATAAATTACGCGGACTTGTATTCTTATGAAGTCTGACTTTTTGTATAAAAAAATGCTTAACATACCAAAGCACTGTAATATCGTCCTTGTACTTTTTCGCTTTTCTTCGAGCATTTATGGGAGATATATAGCATTC]


>consensus_5672#0 AACGCCGCCGCCCCGCTCCGCGCCGTCGTGCACCTGCTCCGCCTCGCCTCATCGTGTCCG CGGCCGGCGAGCAGATCGGCGGCGCGGTGAGCACGGTCCCCTCTTCTTCCTGAACTCGCC CTAGCCTGCTTCAGGCTTCCACCCCGTGCGGCCTCCTCGCGCGCACGGCCGGCCTCCATC GCTGCTCGAATCGAACTAAGGAACTGGTATCAGGCTGTTGGTGAGAATGGAACCAAAGCA TTCAGCTGAAATGTCCAAGCATTTGGACAAGCAAAATCAAGCCCTAATGGAAACTTACCG AGCAATGTCCCACGAGTTGCATAAAGTTCAGGTGGAAGAAGAAACAATCATGCGCAAGTT ATATGAGCTGATGTCTGCAGAAGGACTTCTTCCGAAGCGCAAGAAAGAAAGTCAAGCACA GAAAACTGGGAAATCAACTCAGGAAAACAAAGAGCTTGAACCGTAGGATGTAAACTGTGA ATATTGATACGATACTCATCTTGATGCAATTAACGAGTTGAGCTGAAGAATCAGATGGTT ACTATCTCCACGACATCCTATATCCCCACACCTTGGAATTTCCAAGTGATGGATTTACAG TAGATAATGTGTTCTAACTATAGATGTTAAGTGTGCTCCAGAGGCCAGAGCAATGCAAAA CGAACAATTGAACCCTTGAATCGAATTGTTATGTGAGGAGCCAACAGCTGGCTAGAATCA GAAGTGTATTTTTCATCTGAGATTTCTATATTTTCATAGTATTAGTTTTGCTGTAGTGCT AGTTGTTCCCGATTTTTTGCTATCTGAGTTATAAATTACGCGGACTTGTATTCTTATGAA GTCTGACTTTTTGTATAAAAAAATGCTTAACATACCAAAGCACTGTAATATCGTCCTTGT ACTTTTTCGCTTTTCTTCGAGCATTTATGGGAGATATATAGCATTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)