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Oryza sativa
cluster # 5692 cluster # 5692       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5692#0 length = 971 sequences # 3  

consensusID : consensus_5692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 971
fasta sequence
                              [CGGCCTCAGCGTCGGCCCCGCCGCCGCTCCCGGAGAGCGCCGCCGCAGGATTGGATGCGGGGATTGGGGGAGGCGGTGGTGGAGATGGAGGCGGCGGTGCTGATCTCGGGTGGCTGCGGGTGTTCCCGCACGTGCTCACGGCGTCCATGGCCAACTTCCTCTTCGGCTACCACATCGGGGTCATGAATGGTCCAATAGAGGATATAGCACGGGAGCTTGGTTTTCAGGGGAATCCATTTCTCCAAGGTCTTGTGGTCAGCATATTCATTGTTGGAGCATTTTTCGGAAGCTTAGGCTCATCTGCACTAGTCGACAATTTTGGATGTAAAAGGACTCTTCAAATTGATAGCATTCCGCTGATTCTTGGTGCACTTCTCAGTGCACAGGCAGATTCGTTGGATGAGATGCTCTTGGGAAGATTCCTTGTTGGCATTGGAATTGGCATAAATACAGTGCTCGTTCCACTATATGTCTCCGAGGTTGCTCCAACAAAATACAGGGGTTCTTTGGGGACTCTATGTCAGATCGGAACATGTTTGGGAATAATCGCTGCATTCTCATTGGGAATACCATCTGAAAGTGACCCACATTGGTGGCGGACAATGCTTTATGCTGCATGTGTACCTGGTGTTCTTATTGTTGCTGGAATGCAATTTGCTGTTGAGAGTCCCCGCTGGCTTGCCAAGGTTGGAAGAATAGATGATGCCAGAAATGTTGTAGAACATGTTTGGGGACCTTCTGAAGTTGAGAAGTCCATGGAAGAGATCCAATCTGTTGTTGCAAATGATGATTCGCAGGCTAGCTGGTCAGAACTTCTGGAAGAACCCCACAATAGAGTTGCACTGATTGGAGGGTCCCTTTTCTTTCTGCAACAGTTTGCTGGCATAAATGGCGTTCTGTACTTCTCATCATTANCATTCCGTGATGTTGGTATTACCAGTGGTATCTTGGCAAGCCTATATGTTAATGAT]

[+] EMBL CB652640             [CGGCCTCAGCGTCGGCCCCGCCGCCGCTCCCGGAGAGCGCCGCCGCAGGATTGGATGCGGGGATTGGGGGAGGCGGTGGTGGAGATGGAGGCGGCGGTGCTGATCTCGGGTGGCTGCGGGTGTTCCCGCACGTGCTCACGGCGTCCATGGCCAACTTCCTCTTCGGCTACCACATCGGGGTCATGAATGGTCCAATAGAGGATATAGCACGGGAGCTTGGTTTTCAGGGGAATCCATTTCTCCAAGGTCTTGTGGTCAGCATATTCATTGTTGGAGCATTTTTCGGAAGCTTAGGCTCATCTGCACTAGTCGACAATTTTGGATGTAAAAGGACTCTTCAAATTGATAGCATTCCGCTGATTCTTGGTGCACTTCTCAGTGCACAGGCAGATTCGTTGGATGAGATGCTCTTGGGAAGATTCCTTGTTGGCATTGGAATTGGCATAAATACAGTGCTCGTTCCACTATATGTCTCCGAGGTTGCTCCAACAAAATACAGGGGTTCTTTGGGGACTCTATGTCAGATCGGAACATGTTTGGGAATAATCGCTGCATTCTCATTGGGAATACCATCTGAAAGTGACCCACATTGGTGGCGGACAATGCTTTATGCTGCATGTGTACCTGGTGTTCTTATTGTTGCTGGAATGCAATTTGCTGTTGAGAGTCCCCGC                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB665433             [                                                     GATGCCCGGATTGGGGGAGGCGGTGGTGGAGATGGAGGCGGCGGTGCTGATCTCGGGTGGCTGCGGGTGTTCCCGCACGTGCTCACGGCGTCCATGGCCAACTTCCTCTTCGGCTACCACATCGGGGTCATGAATGGTCCAATAGAGGATATAGCACGGGAGCTTGGTTTTCAGGGGAATCCATTTCTCCAAGGTCTTGTGGTCAGCATATTCATTGTTGGAGCATTTTTCGGAAGCTTAGGCTCATCTGCACTAGTCGACAATTTTGGATGTAAAAGGACTCTTCAAATTGATAGCATTCCGCTGATTCTTGGTGCACTTCTCAGTGCACAGGCAGATTCGTTGGATGAGATGCTCTTGGGAAGATTCCTTGTTGGCATTGGAATTGGCATAAATACAGTGCTCGTTCCACTATATGTCTCCGAGGTTGCTCCAACAAAATACAGGGGTTCTTTGGGGACTCTATGTCAGATCGGAACATGTTTGGGAATAATCGCTGCATTCTCATTGGGAATACCATCTGAAAGTGACCCACATTGGTGGCGGACAATGCTTTATGCTGCATGTGTACCTGGTGTTCTTATTGTTGCTGGAATGCAATTTGCTGTTGAGAGTCCCCGCTGGCTTGCCAAGGTTGGAAGAATAGATGATGCCAGAAATGTTGTAGAACATGTTTGGGGACCTTCTGAAGTTGAGAAGTCCATGGAAGAGATCCAATCTGTTGTTGCAAATGATGATTCGCAGGCTAGCTGGTC                                                                                                                                                                   ]
[-] EMBL OSC22331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTGAGAGTCCCCGCTGGCTTGCCAAGGTTGGAAGAATAGATGATGCCAGAAATGTTGTAGAACATGTTTGGGGACCTTCTGAAGTTGAGAAGTCCATGGAAGAGATCCAATCTGTTGTTGCAAATGATGATTCGCAGGCTAGCTGGTCAGAACTTCTGGAAGAACCCCACAATAGAGTTGCACTGATTGGAGGGTCCCTTTTCTTTCTGCAACAGTTTGCTGGCATAAATGGCGTTCTGTACTTCTCATCATTANCATTCCGTGATGTTGGTATTACCAGTGGTATCTTGGCAAGCCTATATGTTAATGAT]


>consensus_5692#0 CGGCCTCAGCGTCGGCCCCGCCGCCGCTCCCGGAGAGCGCCGCCGCAGGATTGGATGCGG GGATTGGGGGAGGCGGTGGTGGAGATGGAGGCGGCGGTGCTGATCTCGGGTGGCTGCGGG TGTTCCCGCACGTGCTCACGGCGTCCATGGCCAACTTCCTCTTCGGCTACCACATCGGGG TCATGAATGGTCCAATAGAGGATATAGCACGGGAGCTTGGTTTTCAGGGGAATCCATTTC TCCAAGGTCTTGTGGTCAGCATATTCATTGTTGGAGCATTTTTCGGAAGCTTAGGCTCAT CTGCACTAGTCGACAATTTTGGATGTAAAAGGACTCTTCAAATTGATAGCATTCCGCTGA TTCTTGGTGCACTTCTCAGTGCACAGGCAGATTCGTTGGATGAGATGCTCTTGGGAAGAT TCCTTGTTGGCATTGGAATTGGCATAAATACAGTGCTCGTTCCACTATATGTCTCCGAGG TTGCTCCAACAAAATACAGGGGTTCTTTGGGGACTCTATGTCAGATCGGAACATGTTTGG GAATAATCGCTGCATTCTCATTGGGAATACCATCTGAAAGTGACCCACATTGGTGGCGGA CAATGCTTTATGCTGCATGTGTACCTGGTGTTCTTATTGTTGCTGGAATGCAATTTGCTG TTGAGAGTCCCCGCTGGCTTGCCAAGGTTGGAAGAATAGATGATGCCAGAAATGTTGTAG AACATGTTTGGGGACCTTCTGAAGTTGAGAAGTCCATGGAAGAGATCCAATCTGTTGTTG CAAATGATGATTCGCAGGCTAGCTGGTCAGAACTTCTGGAAGAACCCCACAATAGAGTTG CACTGATTGGAGGGTCCCTTTTCTTTCTGCAACAGTTTGCTGGCATAAATGGCGTTCTGT ACTTCTCATCATTANCATTCCGTGATGTTGGTATTACCAGTGGTATCTTGGCAAGCCTAT ATGTTAATGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)