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Oryza sativa
cluster # 5704 cluster # 5704       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5704#0 length = 1297 sequences # 3  

consensusID : consensus_5704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1297
fasta sequence
                              [TTTAAGGTCTTACCACATATCAATTGTAACATTGTACCAGAACAGTTTCTCACATAAACATATTATTGTTGTGTTCCACACATTGAAGCAAACTATATATTGCAAGGAATTAAGCACTCCTATTTTGGTTCTGTCGAACCATCTTTGTTTATGAATACCTGTTGTATAAATTACTGCGTTTGTCATATCATTTTACACTTATAGCAGAGAATTGACGTGGCAAAGCCAGGCGCACGTACACTTTCTTCATCTTGGTGAAGGACCAAATTTTGACATGGAAGACGCGGTATCACTTGCTATGTTTTCGTGGTCGACCCTTTCCTCATGAGCGTCCTCCAAAGCTAGGCCTTCCTTAAGTTGTGCAACCACAGTGGCCATCACTGGTCTTTGAGTAGCAACATCAGCAGTGCACCTCATGGCAGTGTCAACAACCTTCCACATAGAGCTGACATTGTAGGCATCAAGACGCGAATCGGCAACTGAGCTGATATTGCCAGTGACAATCTTCTGTTTCACACGCTGAACAATGTGACCATGTCCAGGTATTATTGGAGACTCACCTGTGGCTACCTCTAGCAAAACAACACCAAAGCTGTAAACATCACTGCTCTCCGTGAGCCTTCCAGTGCTGTAGTACTCTGGATCGATGTATCCCACGGATCCAGCTGCTGTAGCTGATATGTGAGTCTGCGTGTCGCTATGGTATGTTTTGGAAAGCCCAAAATCTCCTATTTTTGCTTTTAGATTTTGACCCAATAGAATGTTATTGGTCTTAACATCTCCATGAATAATTGGCAGGTTACAACCCTTATGTAGATAATCCAGGCCTTGTCCAGCATCAACTAGAATACGTAGACGTGTTGCCCAATTTAAGGATTTATCAGCACCAATTTTACCTCTCAGATGGTCACAAAGATTGCCTCCAGACATGTACTCGTAAACAAGTGCTAAATGATCATTCTCCCAACAGTAGCCAACCAAAGACACCAGATTTCTGTGATGCACCTTTGTCAAACTCTGAACCTCAGCCAAAAACTCATCAAGCCCGTGTGATGATGATTCAGATCGTATCTTGACAGCAACCTCAATATTTTCTTCTAGACAACCATAGTAAACATGTCCAAAGCCTCCGTGTCCAATGAGGCGTTTGAAGTTATCAGTATACTTCTCAAGCTCCTCATATGTAAATCGGCGATTTTCAGTTTTTGGCAGATGGTTCCAGCGATTTTTCACACTTTCTGGGGCATTCATGCGTTCTGGTACTATATACCATGCATGGGAGGATCAGATGAAGGAT]

[+] EMBL CB631541             [TTTAAGGTCTTACCACATATCAATTGTAACATTGTACCAGAACAGTTTCTCACATAAACATATTATTGTTGTGTTCCACACATTGAAGCAAACTATATATTGCAAGGAATTAAGCACTCCTATTTTGGTTCTGTCGAACCATCTTTGTTTATGAATACCTGTTGTATAAATTACTGCGTTTGTCATATCATTTTACACTTATAGCAGAGAATTGACGTGGCAAAGCCAGGCGCACGTACACTTTCTTCATCTTGGTGAAGGACCAAATTTTGACATGGAAGACGCGGTATCACTTGCTATGTTTTCGTGGTCGACCCTTTCCTCATGAGCGTCCTCCAAAGCTAGGCCTTCCTTAAGTTGTGCAACCACAGTGGCCATCACTGGTCTTTGAGTAGCAACATCAGCAGTGCACCTCATGGCAGTGTCAACAACCTTCCACATAGAGCTGACATTGTAGGCATCAAGACGCGAATCGGCAACTGAGCTGATATTGCCAGTGACAATCTTCTGTTTCACACGCTGAACAATGTGACCATGTCCAGGTATTATTGGAGACTCACCTGTGGCTACCTCTAGCAAAACAACACCAAAGCTGTAAACATCACTGCTCTCCGTGAGCCTTCCAGTGCTGTAGTACTCTGGATCGATGTATCCCACGGATCCAGCTGCTGTAGCTGATATGTGAGTCTGCGTGTCGCTATGGTATGTTTTGGAAAGCCCAAAATCTCCTATTTTTGCTTTTAGATTTTGACCCAATAGAATGTTATTGGTCTTAACATCTCCATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB628137             [                            ACATTGTACCAGAACAGTTTCTCACATAAACATCTTATTGTTGTGTTCCACACATTGAAGCAAACTATATATTGCAAGGAATTAAGCACTCCTATTTTGGTTCTGTCGAACCATCTTTGTTTATGAATACCTGTTGTATAAATTACTGCGTTTGTCATATCATTTTACACTTATAGCAGAGAATTGACGTGGCAAAGCCAGGCGCACGTACACTTTCTTCATCTTGGTGAAGGACCAAATTTTGACATGGAAGACGCGGTATCACTTGCTATGTTTTCGTGGTCGACCCTTTCCTCATGAGCGTCCTCCAAAGCTAGGCCTTCCTTAAGTTGTGCAACCACAGTGGCCATCACTGGTCTTTGAGTAGCAACATCAGCAGTGCACCTCATGGCAGTGTCAACAACCTTCCACATAGAGCTGACATTGTAGGCATCAAGACGCGAATCGGCAACTGAGCTGATATTGCCAGTGACAATCTTCTGTTTCACACGCTGAACAATGTGACCATGTCCAGGTATTATTGGAGACTCACCTGTGGCTACCTCTAGCAAAACAACACCAAAGCTGTAAACATCACTGCTCTCCGTGAGCCTTCCAGTGCTGTAGTACTCTGGATCGATGTATCCCACGGATCCAGCTGCTGTAGCTGATATGTGAGTCTGCGTGTCGCTATGGTATGTTTTGGAAAGCCCAAAATCTCCTATTTTTGCTTTTAGATTTTGACCCAATAGAATGTTATTGGTCTTAACATCTCCATGAATAATTGGCAGGTTACAACCCTTATGTAGATAATCCAGGCCTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB631540             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGACAATCTTCTGTTTCACACGCTGAACAATGTGACCATGTCCAGGTATTATGGGAGACTCACCTGTGGCTACCTCTAGCAAAACAACACCAAAGCTGTAAACATCACTGCTCTCCGTGAGCCTTCCAGTGCTGTAGTACTCTGGATCGATGTATCCCACGGATCCAGCTGCTGTAGCTGATATGTGAGTCTGCGTGTCGCTATGGTATGTTTTGGAAAGCCCAAAATCTCCTATTTTTGCTTTTAGATTTTGACCCAATAGAATGTTATTGGTCTTAACATCTCCATGAATAATTGGCAGGTTACAACCCTTATGTAGATAATCCAGGCCTTGTCCAGCATCAACTAGAATACGTAGACGTGTTGCCCAATTTAAGGATTTATCAGCACCAATTTTACCTCTCAGATGGTCACAAAGATTGCCTCCAGACATGTACTCGTAAACAAGTGCTAAATGATCATTCTCCCAACAGTAGCCAACCAAAGACACCAGATTTCTGTGATGCACCTTTGTCAAACTCTGAACCTCAGCCAAAAACTCATCAAGCCCGTGTGATGATGATTCAGATCGTATCTTGACAGCAACCTCAATATTTTCTTCTAGACAACCATAGTAAACATGTCCAAAGCCTCCGTGTCCAATGAGGCGTTTGAAGTTATCAGTATACTTCTCAAGCTCCTCATATGTAAATCGGCGATTTTCAGTTTTTGGCAGATGGTTCCAGCGATTTTTCACACTTTCTGGGGCATTCATGCGTTCTGGTACTATATACCATGCATGGGAGGATCAGATGAAGGAT]


>consensus_5704#0 TTTAAGGTCTTACCACATATCAATTGTAACATTGTACCAGAACAGTTTCTCACATAAACA TATTATTGTTGTGTTCCACACATTGAAGCAAACTATATATTGCAAGGAATTAAGCACTCC TATTTTGGTTCTGTCGAACCATCTTTGTTTATGAATACCTGTTGTATAAATTACTGCGTT TGTCATATCATTTTACACTTATAGCAGAGAATTGACGTGGCAAAGCCAGGCGCACGTACA CTTTCTTCATCTTGGTGAAGGACCAAATTTTGACATGGAAGACGCGGTATCACTTGCTAT GTTTTCGTGGTCGACCCTTTCCTCATGAGCGTCCTCCAAAGCTAGGCCTTCCTTAAGTTG TGCAACCACAGTGGCCATCACTGGTCTTTGAGTAGCAACATCAGCAGTGCACCTCATGGC AGTGTCAACAACCTTCCACATAGAGCTGACATTGTAGGCATCAAGACGCGAATCGGCAAC TGAGCTGATATTGCCAGTGACAATCTTCTGTTTCACACGCTGAACAATGTGACCATGTCC AGGTATTATTGGAGACTCACCTGTGGCTACCTCTAGCAAAACAACACCAAAGCTGTAAAC ATCACTGCTCTCCGTGAGCCTTCCAGTGCTGTAGTACTCTGGATCGATGTATCCCACGGA TCCAGCTGCTGTAGCTGATATGTGAGTCTGCGTGTCGCTATGGTATGTTTTGGAAAGCCC AAAATCTCCTATTTTTGCTTTTAGATTTTGACCCAATAGAATGTTATTGGTCTTAACATC TCCATGAATAATTGGCAGGTTACAACCCTTATGTAGATAATCCAGGCCTTGTCCAGCATC AACTAGAATACGTAGACGTGTTGCCCAATTTAAGGATTTATCAGCACCAATTTTACCTCT CAGATGGTCACAAAGATTGCCTCCAGACATGTACTCGTAAACAAGTGCTAAATGATCATT CTCCCAACAGTAGCCAACCAAAGACACCAGATTTCTGTGATGCACCTTTGTCAAACTCTG AACCTCAGCCAAAAACTCATCAAGCCCGTGTGATGATGATTCAGATCGTATCTTGACAGC AACCTCAATATTTTCTTCTAGACAACCATAGTAAACATGTCCAAAGCCTCCGTGTCCAAT GAGGCGTTTGAAGTTATCAGTATACTTCTCAAGCTCCTCATATGTAAATCGGCGATTTTC AGTTTTTGGCAGATGGTTCCAGCGATTTTTCACACTTTCTGGGGCATTCATGCGTTCTGG TACTATATACCATGCATGGGAGGATCAGATGAAGGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)