cluster # 5708

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Oryza sativa
cluster # 5708 cluster # 5708 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5708#0 length = 2639 sequences # 3
consensusID : consensus_5708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2639
fasta sequence
                              [TTCCTTTCCGAGTTCCGACGCTTTTCCCCACCCGACAAAGCCGCCAACTCCCCCCTCCGCTCTCCTCCGGCTCGCCGGCCTCGCCAGTCGGCAGCCGCCGCCTCTTCCCGCCCCTCTAATCTCCGGCGCTCGATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGGCTCACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGGAGCTGGCACTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGATAAAGTCCAAAACAAGCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAACCTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGAAAAAGAATGCACCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATCGACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATGGCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAGTGAAGTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAAGAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTATGAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCTGTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGAAATTGAACAAGGAGATGCTGGGGCAAAACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTATCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGATGTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCTCCTGTGGATAATAATCCTGCCCAAAAGTCTGACAGCAGCTTTTACTTCGAATATGGTGATTGGAGAGTCCTGTGGGATCCATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGA-CCTGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCTGGTGGTGACAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCTGATGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCACGCCACACTGATAATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGATTGGTCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATATCATTCATGTCAAGACTTGGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGGTATTCACTTTTCTCCCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCAGTGACACCAGAGCTCATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATTGACTGTTTCACAGGAGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCAGGCATGTTATCGCTATTGATATTGATCCCCAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTATGGAGTACATGATCATATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTGAAGGGAGAAACTGTTTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGATGTATATGATATCAAAACCATGCTTAAGCCTTGTGATGGGTATTCTCTCTTTAAACTTGGTACATCAATCGCTTCGAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTGGCAGACATGTGCCTGTCAGTTGATCCTCCTTGGGCAGTTGAGGTAGAGAAGAATTTCCTCAATGGGAAGCTGAAAGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAGGACGCTAGTGATACAAACCCCCAAAACCCAGAATACCATGCTTAGTGAAAAACGCCTGTGCTCAATCATCAAAGGTCAGCGTAATCACAAGGTGCCACTCAGGCCATCGTGTAAGGGCGCGTTCGGCTGTCGTGTGCAGCGGTACCCTGCAGCCTACACCCAGTTCACTTGGTGCAGCAACAAGCTGTAACATGGCTGTGAAACAGCGCTGTACAAGCAGCCGAAGAGGCCCCTCCCTAAGTAGTTGATTTTGGTTCTTACTTGCTAGCATGAAGTTTCTGTAATTATGTCCAGTGTATCTGTTTGTGTCATCAACCTCTCTGTTATTGCACCGTCCACTGTACGATATATAGCTCTTGCGGCATCCCAGCAAGCATCATGGTGCTGCTTCCCTAGCAAATCTATCTTCGAATGGCATGGGAAAAAGGCTGACGTGATATGTTCTATGCATCGCTCATACTGACTATGTGTTACCACAT]

[+] EMBL AK071398             [TTCCTTTCCGAGTTCCGACGCTTTTCCCCACCCGACAAAGCCGCCAACTCCCCCCTCCGCTCTCCTCCGGCTCGCCGGCCTCGCCAGTCGGCAGCCGCCGCCTCTTCCCGCCCCTCTAATCTCCGGCGCTCGATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGGCTCACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGGAGCTGGCACTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGATAAAGTCCAAAACAAGCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAACCTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGAAAAAGAATGCACCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATCGACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATGGCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAGTGAAGTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAAGAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTATGAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCTGTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGAAATTGAACAAGGAGATGCTGGGGCAAAACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTATCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGATGTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCTCCTGTGGATAATAATCCTGCCCAAAAGTCTGACAGCAGCTTTTACTTCGAATATGGTGATTGGAGAGTCCTGTGGGATCCATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGA CCTGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCTGGTGGTGACAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCTGATGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCACGCCACACTGATAATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK103513             [                      TTTCCCCACCCGACAAAGCCGCCAACTCCCCCCTCCGCTCTCCTCCGGCTCGCCGGCCTCGCCAGTCGGCAGCCGCCGCCTCTTCCCGCCCCTCTAATCTCCGGCGCTCGATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGGCTCACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGGAGCTGGCACTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGATAAAGTCCAAAACAAGCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAACCTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGAAAAAGAATGCACCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATCGACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATGGCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAGTGAAGTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAAGAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTATGAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCTGTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGAAATTGAACAAGGAGATGCTGGGGCAAAACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTATCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGATGTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCTCCTGTGGATAATAATCCTGCCCAAAAGTCTGACAGCAGCTTTTACTTCGAATATGGTGATTGGAGAGTCCTGTGGGATCCATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGA CCTGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCTGGTGGTGACAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCTGATGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCACGCCACACTGATAATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGATTGGTCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATATCATTCATGTCAAGACTTGGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGGTATTCACTTTTCTCCCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCAGTGACACCAGAGCTCATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATTGACTGTTTCACAGGAGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCAGGCATGTTATCGCTATTGATATTGATCCCCAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTATGGAGTACATGATCATATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTGAAGGGAGAAACTGTTTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGATGTATATGATATCAAAACCATGCTTAAGCCTTGTGATGGGTATTCTCTCTTTAAACTTGGTACATCAATCGCTTCGAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTGGCAGACATGTGCCTGTCAGTTGATCCTCCTTGGGCAGTTGAGGTAGAGAAGAATTTCCTCAATGGGAAGCTGAAAGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAGGACGCTAGTGATACAAACCCCCAAAACCCAGAATACCATGCTTAGTGAAAAACGCCTGTGCTCAATCATCAAAGGTCAGCGTAATCACAAGGTGCCACTCAGGCCATCGTGTAAGGGCGCGTTCGGCTGTCGTGTGCAGCGGTACCCTGCAGCCTACACCCAGTTCACTTGGTGCAGCAACAAGCTGTAACATGGCTGTGAAACAGCGCTGTACAAGCAGCCGAAGAGGCCCCTCCCTAAGTAGTTGATTTTGGTTCTTACTTGCTAGCATGAAGTTTCTGTAATTATGTCCAGTGTATCTGTTTGTGTCATCAACCTCTCTGTTATTGCACCGTCCACTGTACGATATATAGCTCTTGCGGCATCCCAGCAAGCATCATGGTGCTGCTTCCCTAGCAAATCTATCTTCGAATGGCATGGGAAAAAGGCTGACGTGATATGTTCTATGCATCGCTCATACTGACTATGTGTTACCACAT]
[+] EMBL D43306               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGACCCCGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGNACATGNTCAGGCTCGTGGTGGCAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGCGCAATTTATCAGCTATTCCTGATGGNGAGCGACTAACTCAATGTATCGNAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_5708#0
TTCCTTTCCGAGTTCCGACGCTTTTCCCCACCCGACAAAGCCGCCAACTCCCCCCTCCGC
TCTCCTCCGGCTCGCCGGCCTCGCCAGTCGGCAGCCGCCGCCTCTTCCCGCCCCTCTAAT
CTCCGGCGCTCGATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGG
CGGCACTTCAGGCTCACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGAC
GTGAGCCACAGGAGCTGGCACTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGAT
AAAGTCCAAAACAAGCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTA
GAATTGTCCAACCTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAG
AAAAAGAATGCACCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCA
AATACTCTAATCGACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATT
GTTCAGTTGATGGCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTG
GGTTACAGTGAAGTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCT
AATGAACAGGAAGAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCT
GAAGATAACTATGAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAA
GCAGATTCTCCTGTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGAAATTGAACAAGGAG
ATGCTGGGGCAAAACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATG
GAAGGAGGATTATCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCAT
GATAATAAGGATGTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCTCCTGTGGAT
AATAATCCTGCCCAAAAGTCTGACAGCAGCTTTTACTTCGAATATGGTGATTGGAGAGTC
CTGTGGGATCCATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACA
TGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAA
GACCTGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCT
GGTGGTGACAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTA
TCAGATATTCCTGATGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCA
CGCCACACTGATAATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATG
AATCAGGAGATTGGTCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATATCAT
TCATGTCAAGACTTGGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGG
TATTCACTTTTCTCCCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCA
GTGACACCAGAGCTCATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATT
GACTGTTTCACAGGAGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCAGGCATGTT
ATCGCTATTGATATTGATCCCCAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTAT
GGAGTACATGATCATATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTG
AAGGGAGAAACTGTTTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGAT
GTATATGATATCAAAACCATGCTTAAGCCTTGTGATGGGTATTCTCTCTTTAAACTTGGT
ACATCAATCGCTTCGAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTG
GCAGACATGTGCCTGTCAGTTGATCCTCCTTGGGCAGTTGAGGTAGAGAAGAATTTCCTC
AATGGGAAGCTGAAAGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAG
GACGCTAGTGATACAAACCCCCAAAACCCAGAATACCATGCTTAGTGAAAAACGCCTGTG
CTCAATCATCAAAGGTCAGCGTAATCACAAGGTGCCACTCAGGCCATCGTGTAAGGGCGC
GTTCGGCTGTCGTGTGCAGCGGTACCCTGCAGCCTACACCCAGTTCACTTGGTGCAGCAA
CAAGCTGTAACATGGCTGTGAAACAGCGCTGTACAAGCAGCCGAAGAGGCCCCTCCCTAA
GTAGTTGATTTTGGTTCTTACTTGCTAGCATGAAGTTTCTGTAATTATGTCCAGTGTATC
TGTTTGTGTCATCAACCTCTCTGTTATTGCACCGTCCACTGTACGATATATAGCTCTTGC
GGCATCCCAGCAAGCATCATGGTGCTGCTTCCCTAGCAAATCTATCTTCGAATGGCATGG
GAAAAAGGCTGACGTGATATGTTCTATGCATCGCTCATACTGACTATGTGTTACCACAT
clustalw multiple alignements is not computed in this case