cluster # 5715

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Oryza sativa
cluster # 5715 cluster # 5715 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5715#0 length = 2504 sequences # 2

consensus_5715#1 length = 501 sequences # 1

consensusID : consensus_5715#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2504
fasta sequence

                              [GCGGCCGCGACGCGCCCCCCATGGCCTCGCCGCCCGCCGGCGACGCCCCGCCGCCGGCGGCGGCGGCACGGGAGGAGGAGGAGGAGGAGGGCGTGAGCTGCGGCATCTGCCTGACGGACGCGCGGCGGGCGGTGCGCGGGGAGCTCGACTGCTGCGCCCACCACTTCTGCTTCGTCTGCATCATGGCGTGGGCGCGCGTCGAGTCGCGCTGCCCCTTCTGCAAGGCCCGCTTCCGCACCATCACCCGCCCGCCCGTCCCCGGCCGCTTCCCTTCCCAGCGCGTCGTCGCCGTCCCCGAGCGCAACCAGGCTTGCAACCCTTCGGGCAATGGCAGCAGCACTGTAGACGCTGATCTCTATGCAAACACCAGCTGTAGCGTATGTAACCTCTCCAATGATGATGAACTGCTGATGTTGTGCGAGCTCTGCGATTCTGCTGTGCACACTTACTGTGCCGGTCTAGGCACTGAAATTCCTGAGGGTGACTGGTTCTGTACGGACTGCATGACAGCCAAGGAGGAGCATTCGAGGTGTGAGATTGACGATGACAATTCTAGTGATCATGGTGAATTTAAAATCACCATTGAAGTTCCAATAGCTGATCCAGTTGCTGCTCCTTCCATTTCGGATATTGTGGATGAGGGTCACTCTCCAAATTTAGTACAAAGGTCAAGTGTGCAGAGCAACAGGCCTTCCATTTCTGATCCAGTTCCTTCCATTTATGATATTGTGGATGACGATTACACCACAATTCCAATAGGCAGGGTCAATGCAAGGAGCACTAGGCTGGACAGTAGGGCTGAGCGTTTGCCATCACAGGGTATTTCCGTTGGACCACAATGCCCTGAATCTCCTCAGGAGCGAGAAAATAGTCGGGTGTGTTCGCATGCCCGTTCTCGCATTGAGTCTGAGAGAGCTAGAACACTGCGTAACTCTCGCAATCTTGGTAGCCGTATAAGGGAACTGCGTGAGAACTGGTCTGCTCTCCGTTCAGGTTCGATTGGGTTTGCAACACAATTACACAATAGGAGAAGGGGAAATGGTGCTGGTACTTGTGATATTGAAGAACGCCATCGGTCCACAACAACCTTCATGGAGGTGGCTGCTTCCTCATCTGGTCATGCTAAAAAAATTTCACCTAAGAATAGTTCTGATGTGCACAAGGCATGGAAAATGCTAGAAATGGCAAAATCATCTGGTGGGAAGAAGAAACCTGACAACCCTTCCTCCCTCAATTGCAGTGTTCCATTCTCCATGGGGAATAGATCGACTTCATACAGCCCAATTGATGCAATTTTAGGACATAAGAATAACAAGCTGTATGATGGAATAACTCAGAAAAACAACGCGGAACAACACCGTAGTACAAACATGGAAAATAAACCTCCAACAATGAATTTTGGAGAATGCCGTAAACTGCAGGAGAAATTCCATGGGTCAGCTCATGGAAGAACACCTTCTACAATTATGAGGCAGGAAAGTTTGACTGGTAAAGTTTCCTCATCAAGCAATAATGAGAAGCATAATCGTAGTATAAACATGGAAAATAGGCCTCCAACAGTGAATTTTGGAGAACACCGTAAACTGCAAGAGAGTGCATCAGTTCATGGAAGAATACCTTCTACAGTTATGATGCAGGAAAATTTGAATGGTAAAGTTGCCTCATCAAGCAATAATGAGGATGCAGGTCAAATATTTGAATCTTCACGTGACGTAAGCAGACCAGAGAAATCCAAACCAGTTGTATCCTGTCCGCTTACGTTCAGTTTACTATCTGGCCAGTCCATGGTGACCTCATCACAACAATTAAGACCTGGATGGAGCCAATCTACCGAAATGGTAAGCTCTCAGGAACCATCAGCCACTGCGGCATCTATTGACATCGGTACAGCTGGAGCAAACGACAAAGTTAAAGGTTCTAGACCAGATCGTCTTGAGCGCAAGAGAAAACTTGGTTCTGAAACACATGATGACAAGGGATCCAAGAGATCTATGTCAAGTTGTAAAATAAGAAAAAGTGATATTTCATTTTTGGCCATACGTGAGTTGAAGCTGCTCAATATAGACAAAACTTATGGTTCTGACACCTTCAAGGAAGTTGCTCGAGCAGCAACGCATACTGTTTTGGCCTCCTGTGGATTGGAACATTCACCATCGGTAGCTCTTGCACTCCCAAGACCGGTTTGCAAGCACACCTGCAAAACTGAACCTCTCCCATCTCCAGATGTACTGACCGATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCAGCTCATTGTTGTCTGGCAGGAAGATGGAGTGAACTGCTTCATCATGTTAGAATAGTTTAGAAACCTACATACA-GTTG-TGGTTTTCTTTCCTGTAGTTACTTAAGGTGAAACATCCTGCAACAGATAGTGTAGACAGTGTAGACATGTTGTACATTCTGTACCAT-GTTAAGGTTAGTGTAGACATGTACATTCTATACC-GTGTTAAGGTTATCATTACAGAGCAG]

[+] EMBL AK073829             [GCGGCCGCGACGCGCCCCCCATGGCCTCGCCGCCCGCCGGCGACGCCCCGCCGCCGGCGGCGGCGGCACGGGAGGAGGAGGAGGAGGAGGGCGTGAGCTGCGGCATCTGCCTGACGGACGCGCGGCGGGCGGTGCGCGGGGAGCTCGACTGCTGCGCCCACCACTTCTGCTTCGTCTGCATCATGGCGTGGGCGCGCGTCGAGTCGCGCTGCCCCTTCTGCAAGGCCCGCTTCCGCACCATCACCCGCCCGCCCGTCCCCGGCCGCTTCCCTTCCCAGCGCGTCGTCGCCGTCCCCGAGCGCAACCAGGCTTGCAACCCTTCGGGCAATGGCAGCAGCACTGTAGACGCTGATCTCTATGCAAACACCAGCTGTAGCGTATGTAACCTCTCCAATGATGATGAACTGCTGATGTTGTGCGAGCTCTGCGATTCTGCTGTGCACACTTACTGTGCCGGTCTAGGCACTGAAATTCCTGAGGGTGACTGGTTCTGTACGGACTGCATGACAGCCAAGGAGGAGCATTCGAGGTGTGAGATTGACGATGACAATTCTAGTGATCATGGTGAATTTAAAATCACCATTGAAGTTCCAATAGCTGATCCAGTTGCTGCTCCTTCCATTTCGGATATTGTGGATGAGGGTCACTCTCCAAATTTAGTACAAAGGTCAAGTGTGCAGAGCAACAGGCCTTCCATTTCTGATCCAGTTCCTTCCATTTATGATATTGTGGATGACGATTACACCACAATTCCAATAGGCAGGGTCAATGCAAGGAGCACTAGGCTGGACAGTAGGGCTGAGCGTTTGCCATCACAGGGTATTTCCGTTGGACCACAATGCCCTGAATCTCCTCAGGAGCGAGAAAATAGTCGGGTGTGTTCGCATGCCCGTTCTCGCATTGAGTCTGAGAGAGCTAGAACACTGCGTAACTCTCGCAATCTTGGTAGCCGTATAAGGGAACTGCGTGAGAACTGGTCTGCTCTCCGTTCAGGTTCGATTGGGTTTGCAACACAATTACACAATAGGAGAAGGGGAAATGGTGCTGGTACTTGTGATATTGAAGAACGCCATCGGTCCACAACAACCTTCATGGAGGTGGCTGCTTCCTCATCTGGTCATGCTAAAAAAATTTCACCTAAGAATAGTTCTGATGTGCACAAGGCATGGAAAATGCTAGAAATGGCAAAATCATCTGGTGGGAAGAAGAAACCTGACAACCCTTCCTCCCTCAATTGCAGTGTTCCATTCTCCATGGGGAATAGATCGACTTCATACAGCCCAATTGATGCAATTTTAGGACATAAGAATAACAAGCTGTATGATGGAATAACTCAGAAAAACAACGCGGAACAACACCGTAGTACAAACATGGAAAATAAACCTCCAACAATGAATTTTGGAGAATGCCGTAAACTGCAGGAGAAATTCCATGGGTCAGCTCATGGAAGAACACCTTCTACAATTATGAGGCAGGAAAGTTTGACTGGTAAAGTTTCCTCATCAAGCAATAATGAGAAGCATAATCGTAGTATAAACATGGAAAATAGGCCTCCAACAGTGAATTTTGGAGAACACCGTAAACTGCAAGAGAGTGCATCAGTTCATGGAAGAATACCTTCTACAGTTATGATGCAGGAAAATTTGAATGGTAAAGTTGCCTCATCAAGCAATAATGAGGATGCAGGTCAAATATTTGAATCTTCACGTGACGTAAGCAGACCAGAGAAATCCAAACCAGTTGTATCCTGTCCGCTTACGTTCAGTTTACTATCTGGCCAGTCCATGGTGACCTCATCACAACAATTAAGACCTGGATGGAGCCAATCTACCGAAATGGTAAGCTCTCAGGAACCATCAGCCACTGCGGCATCTATTGACATCGGTACAGCTGGAGCAAACGACAAAGTTAAAGGTTCTAGACCAGATCGTCTTGAGCGCAAGAGAAAACTTGGTTCTGAAACACATGATGACAAGGGATCCAAGAGATCTATGTCAAGTTGTAAAATAAGAAAAAGTGATATTTCATTTTTGGCCATACGTGAGTTGAAGCTGCTCAATATAGACAAAACTTATGGTTCTGACACCTTCAAGGAAGTTGCTCGAGCAGCAACGCATACTGTTTTGGCCTCCTGTGGATTGGAACATTCACCATCGGTAGCTCTTGCACTCCCAAGACCGGTTTGCAAGCACACCTGCAAAACTGAACCTCTCCCATCTCCAGATGTACTGACCGATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCAGCTCATTGTTGTCTGGCAGGAAGATGGAGTGAACTGCTTCATCATGTTAGAATAGTTTAGAAACCTACATACA GTTG TGGTTTTCTTTCCTGTAGTTACTTAAGGTGAAACATCCTGCAACAGATAGTGTAGACAGTGTAGACATGTTGTACATTCTGTACCAT GTTAAGGTTAGTGTAGACATGTACATTCTATACC GTGTTAAGGTTATCATTACAGAGCAG]
[+] EMBL CB097203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGCAGGTCAAATATTTGAATCTTCACGTGACGTAAGCAGACCAGAGAAATCCAAACCAGTTGTATCCTGTCCGCTTACGTTCAGTTTACTATCTGGCCAGTCCATGGTGACCTCATCACAACAATTAAGACCTGGATGGAGCCAATCTACCGAAATGGTAAGCTCTCAGGAACCATCAGCCACTGCGGCATCTATTGACATCGGTACAGCTGGAGCAAACGACAAAGTTAAAGGTTCTAGACCAGATCGTCTTGAGCGCAAGAGAAAACTTGGTTCTGAAACACATGATGACAAGGGATCCAAGAGATCTATGTCAAGTTGTAAAATAAGAAAAAGTGATATTTCACTTTTGGCCATACGTGAGTTGAAGCTGCTCAATATAGACAAAACTTATGGTTCTGACACCTTCAAGGAAGTTGCTCGAGCAGCAACGCATACTGTTTTGGCCTCCTGTGGATTGGAACATTCACCATCGGTAGCTCTTGCACTCCCAAGACCGGTTTGCAAGCACACCTGCAAAACTGAACCTCTCCCATCTCCAGATGTACTGACCGATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCAGCTCATTGNTGTCTGGCAGGAAGATGGAGTGAACTGCTTCATCATGGTAGAATAGNTTAGAAACCTAGACACAGGTTGNGGGTTTTCTTTCCTGNAGNTACCTAAGGNGAAACATNCTGCAACAGATAGTGTAGACAGNGTAAACATGNTGGACATTCTGTACCATGGTTAAGGTTAGNGNAAACATGTACATTCTATACCGGGGTTAAGGNTNTCATTtccg     ]




>consensus_5715#0
GCGGCCGCGACGCGCCCCCCATGGCCTCGCCGCCCGCCGGCGACGCCCCGCCGCCGGCGG
CGGCGGCACGGGAGGAGGAGGAGGAGGAGGGCGTGAGCTGCGGCATCTGCCTGACGGACG
CGCGGCGGGCGGTGCGCGGGGAGCTCGACTGCTGCGCCCACCACTTCTGCTTCGTCTGCA
TCATGGCGTGGGCGCGCGTCGAGTCGCGCTGCCCCTTCTGCAAGGCCCGCTTCCGCACCA
TCACCCGCCCGCCCGTCCCCGGCCGCTTCCCTTCCCAGCGCGTCGTCGCCGTCCCCGAGC
GCAACCAGGCTTGCAACCCTTCGGGCAATGGCAGCAGCACTGTAGACGCTGATCTCTATG
CAAACACCAGCTGTAGCGTATGTAACCTCTCCAATGATGATGAACTGCTGATGTTGTGCG
AGCTCTGCGATTCTGCTGTGCACACTTACTGTGCCGGTCTAGGCACTGAAATTCCTGAGG
GTGACTGGTTCTGTACGGACTGCATGACAGCCAAGGAGGAGCATTCGAGGTGTGAGATTG
ACGATGACAATTCTAGTGATCATGGTGAATTTAAAATCACCATTGAAGTTCCAATAGCTG
ATCCAGTTGCTGCTCCTTCCATTTCGGATATTGTGGATGAGGGTCACTCTCCAAATTTAG
TACAAAGGTCAAGTGTGCAGAGCAACAGGCCTTCCATTTCTGATCCAGTTCCTTCCATTT
ATGATATTGTGGATGACGATTACACCACAATTCCAATAGGCAGGGTCAATGCAAGGAGCA
CTAGGCTGGACAGTAGGGCTGAGCGTTTGCCATCACAGGGTATTTCCGTTGGACCACAAT
GCCCTGAATCTCCTCAGGAGCGAGAAAATAGTCGGGTGTGTTCGCATGCCCGTTCTCGCA
TTGAGTCTGAGAGAGCTAGAACACTGCGTAACTCTCGCAATCTTGGTAGCCGTATAAGGG
AACTGCGTGAGAACTGGTCTGCTCTCCGTTCAGGTTCGATTGGGTTTGCAACACAATTAC
ACAATAGGAGAAGGGGAAATGGTGCTGGTACTTGTGATATTGAAGAACGCCATCGGTCCA
CAACAACCTTCATGGAGGTGGCTGCTTCCTCATCTGGTCATGCTAAAAAAATTTCACCTA
AGAATAGTTCTGATGTGCACAAGGCATGGAAAATGCTAGAAATGGCAAAATCATCTGGTG
GGAAGAAGAAACCTGACAACCCTTCCTCCCTCAATTGCAGTGTTCCATTCTCCATGGGGA
ATAGATCGACTTCATACAGCCCAATTGATGCAATTTTAGGACATAAGAATAACAAGCTGT
ATGATGGAATAACTCAGAAAAACAACGCGGAACAACACCGTAGTACAAACATGGAAAATA
AACCTCCAACAATGAATTTTGGAGAATGCCGTAAACTGCAGGAGAAATTCCATGGGTCAG
CTCATGGAAGAACACCTTCTACAATTATGAGGCAGGAAAGTTTGACTGGTAAAGTTTCCT
CATCAAGCAATAATGAGAAGCATAATCGTAGTATAAACATGGAAAATAGGCCTCCAACAG
TGAATTTTGGAGAACACCGTAAACTGCAAGAGAGTGCATCAGTTCATGGAAGAATACCTT
CTACAGTTATGATGCAGGAAAATTTGAATGGTAAAGTTGCCTCATCAAGCAATAATGAGG
ATGCAGGTCAAATATTTGAATCTTCACGTGACGTAAGCAGACCAGAGAAATCCAAACCAG
TTGTATCCTGTCCGCTTACGTTCAGTTTACTATCTGGCCAGTCCATGGTGACCTCATCAC
AACAATTAAGACCTGGATGGAGCCAATCTACCGAAATGGTAAGCTCTCAGGAACCATCAG
CCACTGCGGCATCTATTGACATCGGTACAGCTGGAGCAAACGACAAAGTTAAAGGTTCTA
GACCAGATCGTCTTGAGCGCAAGAGAAAACTTGGTTCTGAAACACATGATGACAAGGGAT
CCAAGAGATCTATGTCAAGTTGTAAAATAAGAAAAAGTGATATTTCATTTTTGGCCATAC
GTGAGTTGAAGCTGCTCAATATAGACAAAACTTATGGTTCTGACACCTTCAAGGAAGTTG
CTCGAGCAGCAACGCATACTGTTTTGGCCTCCTGTGGATTGGAACATTCACCATCGGTAG
CTCTTGCACTCCCAAGACCGGTTTGCAAGCACACCTGCAAAACTGAACCTCTCCCATCTC
CAGATGTACTGACCGATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCA
GCTCATTGTTGTCTGGCAGGAAGATGGAGTGAACTGCTTCATCATGTTAGAATAGTTTAG
AAACCTACATACAGTTGTGGTTTTCTTTCCTGTAGTTACTTAAGGTGAAACATCCTGCAA
CAGATAGTGTAGACAGTGTAGACATGTTGTACATTCTGTACCATGTTAAGGTTAGTGTAG
ACATGTACATTCTATACCGTGTTAAGGTTATCATTACAGAGCAG

consensusID : consensus_5715#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 501
fasta sequence

                              [GTGAGTTGAAGCTGCTCCATATAGCCAAACTTATGGTTCTGACACCNGTCAAGGAAGTTGCTCGAGCAGCACGCATTACTGTTTTGGCCTACCTGTGGATTGGAACATTCACCATCGGTAGCTCTTGCACTCCCCAGACCGGTGTTGCAAGCACACCTGCNAAACTGAACCTCTCCCATCTCCAGATGTACTGACCCATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCAGCTCATTGTTGTCTGGCACGGAAGATGGAGTGAACTGCTTCATCACTGTTAGAATAGNTTAGAAACCTAGACCCACGTTGTGGTTTTCTTTCCTGTAGTTACCTAAGGGTGAAACACTCCTGCACCCACGATAGTGTAGACCACGTGTAGACCACTGTTGTACCCTTCTGTACCCACTGTTAAGGTTAGTGTAGACATGTACCTTCTATACCGTGTTAAGGTTATCNTTACCGANCCGTTTTTTTCTCCAAAAAAAAAA]

[+] EMBL BM419899             [GTGAGTTGAAGCTGCTCCATATAGCCAAACTTATGGTTCTGACACCNGTCAAGGAAGTTGCTCGAGCAGCACGCATTACTGTTTTGGCCTACCTGTGGATTGGAACATTCACCATCGGTAGCTCTTGCACTCCCCAGACCGGTGTTGCAAGCACACCTGCNAAACTGAACCTCTCCCATCTCCAGATGTACTGACCCATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCAGCTCATTGTTGTCTGGCACGGAAGATGGAGTGAACTGCTTCATCACTGTTAGAATAGNTTAGAAACCTAGACCCACGTTGTGGTTTTCTTTCCTGTAGTTACCTAAGGGTGAAACACTCCTGCACCCACGATAGTGTAGACCACGTGTAGACCACTGTTGTACCCTTCTGTACCCACTGTTAAGGTTAGTGTAGACATGTACCTTCTATACCGTGTTAAGGTTATCNTTACCGANCCGTTTTTTTCTCCAAAAAAAAAA]




>consensus_5715#1
GTGAGTTGAAGCTGCTCCATATAGCCAAACTTATGGTTCTGACACCNGTCAAGGAAGTTG
CTCGAGCAGCACGCATTACTGTTTTGGCCTACCTGTGGATTGGAACATTCACCATCGGTA
GCTCTTGCACTCCCCAGACCGGTGTTGCAAGCACACCTGCNAAACTGAACCTCTCCCATC
TCCAGATGTACTGACCCATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCAT
CAGCTCATTGTTGTCTGGCACGGAAGATGGAGTGAACTGCTTCATCACTGTTAGAATAGN
TTAGAAACCTAGACCCACGTTGTGGTTTTCTTTCCTGTAGTTACCTAAGGGTGAAACACT
CCTGCACCCACGATAGTGTAGACCACGTGTAGACCACTGTTGTACCCTTCTGTACCCACT
GTTAAGGTTAGTGTAGACATGTACCTTCTATACCGTGTTAAGGTTATCNTTACCGANCCG
TTTTTTTCTCCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5715#0      GCGGCCGCGACGCGCCCCCCATGGCCTCGCCGCCCGCCGGCGACGCCCCGCCGCCGGCGG 60
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CGGCGGCACGGGAGGAGGAGGAGGAGGAGGGCGTGAGCTGCGGCATCTGCCTGACGGACG 120
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CGCGGCGGGCGGTGCGCGGGGAGCTCGACTGCTGCGCCCACCACTTCTGCTTCGTCTGCA 180
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      TCATGGCGTGGGCGCGCGTCGAGTCGCGCTGCCCCTTCTGCAAGGCCCGCTTCCGCACCA 240
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      TCACCCGCCCGCCCGTCCCCGGCCGCTTCCCTTCCCAGCGCGTCGTCGCCGTCCCCGAGC 300
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      GCAACCAGGCTTGCAACCCTTCGGGCAATGGCAGCAGCACTGTAGACGCTGATCTCTATG 360
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CAAACACCAGCTGTAGCGTATGTAACCTCTCCAATGATGATGAACTGCTGATGTTGTGCG 420
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      AGCTCTGCGATTCTGCTGTGCACACTTACTGTGCCGGTCTAGGCACTGAAATTCCTGAGG 480
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      GTGACTGGTTCTGTACGGACTGCATGACAGCCAAGGAGGAGCATTCGAGGTGTGAGATTG 540
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ACGATGACAATTCTAGTGATCATGGTGAATTTAAAATCACCATTGAAGTTCCAATAGCTG 600
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ATCCAGTTGCTGCTCCTTCCATTTCGGATATTGTGGATGAGGGTCACTCTCCAAATTTAG 660
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      TACAAAGGTCAAGTGTGCAGAGCAACAGGCCTTCCATTTCTGATCCAGTTCCTTCCATTT 720
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ATGATATTGTGGATGACGATTACACCACAATTCCAATAGGCAGGGTCAATGCAAGGAGCA 780
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CTAGGCTGGACAGTAGGGCTGAGCGTTTGCCATCACAGGGTATTTCCGTTGGACCACAAT 840
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      GCCCTGAATCTCCTCAGGAGCGAGAAAATAGTCGGGTGTGTTCGCATGCCCGTTCTCGCA 900
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      TTGAGTCTGAGAGAGCTAGAACACTGCGTAACTCTCGCAATCTTGGTAGCCGTATAAGGG 960
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      AACTGCGTGAGAACTGGTCTGCTCTCCGTTCAGGTTCGATTGGGTTTGCAACACAATTAC 1020
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ACAATAGGAGAAGGGGAAATGGTGCTGGTACTTGTGATATTGAAGAACGCCATCGGTCCA 1080
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CAACAACCTTCATGGAGGTGGCTGCTTCCTCATCTGGTCATGCTAAAAAAATTTCACCTA 1140
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      AGAATAGTTCTGATGTGCACAAGGCATGGAAAATGCTAGAAATGGCAAAATCATCTGGTG 1200
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      GGAAGAAGAAACCTGACAACCCTTCCTCCCTCAATTGCAGTGTTCCATTCTCCATGGGGA 1260
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ATAGATCGACTTCATACAGCCCAATTGATGCAATTTTAGGACATAAGAATAACAAGCTGT 1320
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ATGATGGAATAACTCAGAAAAACAACGCGGAACAACACCGTAGTACAAACATGGAAAATA 1380
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      AACCTCCAACAATGAATTTTGGAGAATGCCGTAAACTGCAGGAGAAATTCCATGGGTCAG 1440
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CTCATGGAAGAACACCTTCTACAATTATGAGGCAGGAAAGTTTGACTGGTAAAGTTTCCT 1500
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CATCAAGCAATAATGAGAAGCATAATCGTAGTATAAACATGGAAAATAGGCCTCCAACAG 1560
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      TGAATTTTGGAGAACACCGTAAACTGCAAGAGAGTGCATCAGTTCATGGAAGAATACCTT 1620
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CTACAGTTATGATGCAGGAAAATTTGAATGGTAAAGTTGCCTCATCAAGCAATAATGAGG 1680
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      ATGCAGGTCAAATATTTGAATCTTCACGTGACGTAAGCAGACCAGAGAAATCCAAACCAG 1740
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      TTGTATCCTGTCCGCTTACGTTCAGTTTACTATCTGGCCAGTCCATGGTGACCTCATCAC 1800
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      AACAATTAAGACCTGGATGGAGCCAATCTACCGAAATGGTAAGCTCTCAGGAACCATCAG 1860
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CCACTGCGGCATCTATTGACATCGGTACAGCTGGAGCAAACGACAAAGTTAAAGGTTCTA 1920
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      GACCAGATCGTCTTGAGCGCAAGAGAAAACTTGGTTCTGAAACACATGATGACAAGGGAT 1980
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      CCAAGAGATCTATGTCAAGTTGTAAAATAAGAAAAAGTGATATTTCATTTTTGGCCATAC 2040
consensus_5715#1      ------------------------------------------------------------
                                                                                  

consensus_5715#0      GTGAGTTGAAGCTGCTCAATATAGACAAAACTTATGGTTCTGACACCT-TCAAGGAAGTT 2099
consensus_5715#1      GTGAGTTGAAGCTGCTCCATATAGCCAAA-CTTATGGTTCTGACACCNGTCAAGGAAGTT 59
                      ***************** ****** **** *****************  ***********

consensus_5715#0      GCTCGAGCAGCAACGCAT-ACTGTTTTGGCCT-CCTGTGGATTGGAACATTCACCATCGG 2157
consensus_5715#1      GCTCGAGCAGCA-CGCATTACTGTTTTGGCCTACCTGTGGATTGGAACATTCACCATCGG 118
                      ************ ***** ************* ***************************

consensus_5715#0      TAGCTCTTGCACTCCCAAGACCGGT-TTGCAAGCACACCTGCAAAACTGAACCTCTCCCA 2216
consensus_5715#1      TAGCTCTTGCACTCCCCAGACCGGTGTTGCAAGCACACCTGCNAAACTGAACCTCTCCCA 178
                      **************** ******** **************** *****************

consensus_5715#0      TCTCCAGATGTACTGACCGATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTC 2276
consensus_5715#1      TCTCCAGATGTACTGACCCATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTC 238
                      ****************** *****************************************

consensus_5715#0      ATCAGCTCATTGTTGTCTGGCA-GGAAGATGGAGTGAACTGCTTCATCA-TGTTAGAATA 2334
consensus_5715#1      ATCAGCTCATTGTTGTCTGGCACGGAAGATGGAGTGAACTGCTTCATCACTGTTAGAATA 298
                      ********************** ************************** **********

consensus_5715#0      GTTTAGAAACCTACATACA-GTTGTGGTTTTCTTTCCTGTAGTTACTTAAGG-TGAAACA 2392
consensus_5715#1      GNTTAGAAACCTAGACCCACGTTGTGGTTTTCTTTCCTGTAGTTACCTAAGGGTGAAACA 358
                      * *********** *  ** ************************** ***** *******

consensus_5715#0      -TCCTGCAACA--GATAGTGTAGACA--GTGTAGACA--TGTTGTACA-TTCTGTACCA- 2443
consensus_5715#1      CTCCTGCACCCACGATAGTGTAGACCACGTGTAGACCACTGTTGTACCCTTCTGTACCCA 418
                       ******* *   ************   ********   ********  *********  

consensus_5715#0      -TGTTAAGGTTAGTGTAGACATGTACATTCTATACCGTGTTAAGGTTATCATTACAGAGC 2502
consensus_5715#1      CTGTTAAGGTTAGTGTAGACATGTACCTTCTATACCGTGTTAAGGTTATCNTTACCGANC 478
                       ************************* *********************** **** ** *

consensus_5715#0      AG--------------------- 2504
consensus_5715#1      CGTTTTTTTCTCCAAAAAAAAAA 501
                       *