cluster # 572

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 572 cluster # 572 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_572#0 length = 2472 sequences # 2
consensusID : consensus_572#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2472
fasta sequence
                              [AAGCCAAAGCCCCACCCAAAGCGGCGACGCCCCTCTCTCTCTCTCTCTCTCTCTCTTCTCTTCTCTTCTCTCCTCCACGTCGCGGCTCGCGCCTCCAAATCCCCCCCCGCGAGGCGAGCAGGGCGAGGCGGCGAAAGCGCGACGCGCGAGCGGATCGAGGCGGCGGCGTCGGTGCCGGCATCCACCGCGTGCATAGGTTGCGTCGGCGGCGGCGGAAGCGGGGCGCGATGACGGACGGCCACCACTTCAACAACATATCCCTCGGCGGCCGCGGCGGCAACAACCCTGGCCAGTTTAAACTTTATTCGGGAGGACTTGCATGGAAGAGGCAAGGTGGAGGAAAGACCATTGAGGTTGAAAAGTCTGATATCACTTCTGTGACATGGATGGCAATCCCCAGATCCTATCAGCTTGGTGTTTCAACAAAGGAGGGCCTCTTCTACAGGTTCTTTGGCTTCCGTGAACAGGATATCAGTTCATTGACTAACTTCATGGAAAAGAACATGAGAATCACACCAGAGGAGAAGCAGCTTTCTGTTGGTGGACATAATTGGGGCGGAATTGAAATCAATGGCAATATGCTTAGCTTTAATGTTGGTTCAAAGGAAGCATTTGAAGTCTCTCTAGCAGACGTAGCACAAACTCAGATGCAAGGAAAAAAAGATGTTGTTCTGGAGTTTCATGTGGATGATACTACTGGTGGTAATGAGAAAGATTCATTGATGGATTTAAGCTTTCATGTACCAACTTCAAATACTCAATTCCCTGGAGATGAGAATCGTCCTTCAGCTCAGGTTTTATGGCAGGCTATCTTGAATAAGGCTGATGTTGGCTCATCAGAGGAAGCTGTTGTTACATTTGATGGAATTGCTATTCTTACTCCAAGAGGTCGATACAGTGTTGAACTTCATCTGTCATTCTTACGACTCCAAGGACAAGCTAATGATTTCAAAATTCAATATAGCAGTATTCTTCGCCTCTTTGTTTTACCAAAGTCAAATAATCCTCATACCTTTGTGGTTATCACTCTTGATCCACCAATTCGCAAAGGACAGACATTATATCCTCACATTGTTATTCAGTTTGAAACTGAAGCAGTCGTTCAAAGGGATCTGACATTAAGTGATGAGGTTTTGGCTGAAAAGTACAAGGATAGACTGGAGAACTCTTACCAGGGTCTGATACATGAAGTGTTCTCCAAGGTCCTTCGTGGCCTATCTGGTGCTAAAGTTACGAGGCCAAGCACGTTCCGCAGTTGTCAAGATGGATATGCAGTGAAATCATCACTCAAAGCTGAAGATGGATTGCTCTATCCGCTGGAGAAGGGCTTCTTCTTTCTACCAAAGCCCCCAACACTCATTCTGCATGAGGAGATTGAGTATGTTGAATTTGAGCGACATGGTGCTGGGGGTGCTAGTATCTCATCTCACTATTTTGATCTCCTGGTCAAGCTGAAAAATGATCAAGAACATCTATTCAGAAATATCCAAAGAAATGAATACCATAATCTCTTCAATTTCATCAGTGGCAAGCATTTGAAAATCTTGAATCTTGGAGAAGCTCAAGGTAGAGCTGGTGGCGTTACAGCTGTTCTTCAGAGCACTGATGATGATGCTGTTGATCCTCATCTGGAGCGGATCAGAAATCAGACTGGCGATGATGAGAGTGATGAAGAGGATGAAGATTTTGTGGCGGACAAGGACGACAGTGGATCTCCTACTGATGATTCTGGAGAGGAGGGTTCTGACGCTAGTTTAAGTGGAGGAGAAAAGGAGAAATCTTCCAAAAAGGAAGCTAGTAGCTCAAAGGCGCCTTTGAAGAAGAGGAAGCCAAAGGGTGGGGATGCGGCGGAAGGCTCGGAGAAAAGAAAGCCAAAGAAAAAGAAGGATCCTAATGCCCCTAAAAGAGCAATTGCACCATTCATGTACTTCTCAAAAGCTGAGCGAGCTAATCTGAAGAACAGCAATCCGGAGCTGGCTACCACAGAGATTGCGAAGAAGCTTGGGGAGAGGTGGCAAAAGATGACAGCCGAGGAGAAGCAGCCATACGTCGAGCAGTCTCAAGTTGACAAGAAGCGCTACGCGGAGGAGTCAGCCGCCTACCGCGGGGCGGCTGCCATGGATGTGGACTCCGGCCCTGCTTCGGACTGAAGAGAAGAGACCTGAATTGCATTCCAGATTACCCTTAGTCTAGGAGGGCGACAGACAGGATACGGCTAGTGGCATCTCTATTTCCATGTAAATAAAACTTATGAGTTATCTGGATGTAAATAAAACTATCGTAGGTATCTTTCGAGTCCCGTTCTATGAGTGTCTTATCGCTTTATCTTAGCTATATATATAGATAGCAGCTATAGTATAGTAGAGTTCTTCCCGCCATTTATGCTGGCCGGATAACTTACCTTCACCTATGTAGCAGCAATAAGCATGCTTATCTGCTTAGTTAAATTATAAATGCGTGTTCTAGCTGGAG]

[+] EMBL AK102592             [AAGCCAAAGCCCCACCCAAAGCGGCGACGCCCCTCTCTCTCTCTCTCTCTCTCTCTTCTCTTCTCTTCTCTCCTCCACGTCGCGGCTCGCGCCTCCAAATCCCCCCCCGCGAGGCGAGCAGGGCGAGGCGGCGAAAGCGCGACGCGCGAGCGGATCGAGGCGGCGGCGTCGGTGCCGGCATCCACCGCGTGCATAGGTTGCGTCGGCGGCGGCGGAAGCGGGGCGCGATGACGGACGGCCACCACTTCAACAACATATCCCTCGGCGGCCGCGGCGGCAACAACCCTGGCCAGTTTAAACTTTATTCGGGAGGACTTGCATGGAAGAGGCAAGGTGGAGGAAAGACCATTGAGGTTGAAAAGTCTGATATCACTTCTGTGACATGGATGGCAATCCCCAGATCCTATCAGCTTGGTGTTTCAACAAAGGAGGGCCTCTTCTACAGGTTCTTTGGCTTCCGTGAACAGGATATCAGTTCATTGACTAACTTCATGGAAAAGAACATGAGAATCACACCAGAGGAGAAGCAGCTTTCTGTTGGTGGACATAATTGGGGCGGAATTGAAATCAATGGCAATATGCTTAGCTTTAATGTTGGTTCAAAGGAAGCATTTGAAGTCTCTCTAGCAGACGTAGCACAAACTCAGATGCAAGGAAAAAAAGATGTTGTTCTGGAGTTTCATGTGGATGATACTACTGGTGGTAATGAGAAAGATTCATTGATGGATTTAAGCTTTCATGTACCAACTTCAAATACTCAATTCCCTGGAGATGAGAATCGTCCTTCAGCTCAGGTTTTATGGCAGGCTATCTTGAATAAGGCTGATGTTGGCTCATCAGAGGAAGCTGTTGTTACATTTGATGGAATTGCTATTCTTACTCCAAGAGGTCGATACAGTGTTGAACTTCATCTGTCATTCTTACGACTCCAAGGACAAGCTAATGATTTCAAAATTCAATATAGCAGTATTCTTCGCCTCTTTGTTTTACCAAAGTCAAATAATCCTCATACCTTTGTGGTTATCACTCTTGATCCACCAATTCGCAAAGGACAGACATTATATCCTCACATTGTTATTCAGTTTGAAACTGAAGCAGTCGTTCAAAGGGATCTGACATTAAGTGATGAGGTTTTGGCTGAAAAGTACAAGGATAGACTGGAGAACTCTTACCAGGGTCTGATACATGAAGTGTTCTCCAAGGTCCTTCGTGGCCTATCTGGTGCTAAAGTTACGAGGCCAAGCACGTTCCGCAGTTGTCAAGATGGATATGCAGTGAAATCATCACTCAAAGCTGAAGATGGATTGCTCTATCCGCTGGAGAAGGGCTTCTTCTTTCTACCAAAGCCCCCAACACTCATTCTGCATGAGGAGATTGAGTATGTTGAATTTGAGCGACATGGTGCTGGGGGTGCTAGTATCTCATCTCACTATTTTGATCTCCTGGTCAAGCTGAAAAATGATCAAGAACATCTATTCAGAAATATCCAAAGAAATGAATACCATAATCTCTTCAATTTCATCAGTGGCAAGCATTTGAAAATCTTGAATCTTGGAGAAGCTCAAGGTAGAGCTGGTGGCGTTACAGCTGTTCTTCAGAGCACTGATGATGATGCTGTTGATCCTCATCTGGAGCGGATCAGAAATCAGACTGGCGATGATGAGAGTGATGAAGAGGATGAAGATTTTGTGGCGGACAAGGACGACAGTGGATCTCCTACTGATGATTCTGGAGAGGAGGGTTCTGACGCTAGTTTAAGTGGAGGAGAAAAGGAGAAATCTTCCAAAAAGGAAGCTAGTAGCTCAAAGGCGCCTTTGAAGAAGAGGAAGCCAAAGGGTGGGGATGCGGCGGAAGGCTCGGAGAAAAGAAAGCCAAAGAAAAAGAAGGATCCTAATGCCCCTAAAAGAGCAATTGCACCATTCATGTACTTCTCAAAAGCTGAGCGAGCTAATCTGAAGAACAGCAATCCGGAGCTGGCTACCACAGAGATTGCGAAGAAGCTTGGGGAGAGGTGGCAAAAGATGACAGCCGAGGAGAAGCAGCCATACGTCGAGCAGTCTCAAGTTGACAAGAAGCGCTACGCGGAGGAGTCAGCCGCCTACCGCGGGGCGGCTGCCATGGATGTGGACTCCGGCCCTGCTTCGGACTGAAGAGAAGAGACCTGAATTGCATTCCAGATTACCCTTAGTCTAGGAGGGCGACAGACAGGATACGGCTAGTGGCATCTCTATTTCCATGTAAATAAAACTTATGAGTTATCTGGATGTAAATAAAACTATCGTAGGTATCTTTCGAGTCCCGTTCTATGAGTGTCTTATCGCTTTATCTTAGCTATATATATAGATAGCAGCTATAGTATAGTAGAGTTCTTCCCGCCATTTATGCTGGCCGGATAACTTACCTTCACCTATGTAGCAGCAATAAGCATGCTTATCTGCTTAGTTAAATTATAAATGCGTGTTCTAGCTGGAG]
[+] EMBL AA754659             [                                                                                                                                                                                                                                                                                                                                                                      cgnnTCTVATATCACTTCTGTGACATGGATGGCAATCCCCAGATCCTATCAGCTTGGTGTTTCAACAGAGGAGGGCCTCTTCTACAGGTTCTTTGGCTTCCGTGAACAGGATATCAGTTCATTGACTAACTTCATGGAAAAGAACATGAGAATCACACCAGAGGAGAAGCAGCTTTCTGTTGGTGGACATAATTGGGGCGGAATTGAAATCAATGGCAATATGCTTAGCTTTAATGTTGGTTCAAAGGAAGCATTTGAAGTCTCTCTAGCAGACGTAGCACAAACTCAGATGCAAGGAAAAACAGATKTTGTTCTGGAGTTTCATGTGGATGATACTACTGGTGGTAATGAGAAAGATTCATTGATGGATTTAAGCTTTCATGTMCCAACTTCAAATACTCAATTCCCTGGRGATGAGAATCGYCCTTCAGCTCAGGTTTTATGGCAGGCTATCTTGAATAAGGCTGATGTTGGCTCAWCAGAGGGAGCTKTTGTTACATTTGATGGAATTGCTATTCTBACTCCAAGAGGGCGATACAGTGTTGVACTTCATCTGTCATTCTTRCGGCTCCAAGGRCAAGCTAATGWTTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_572#0
AAGCCAAAGCCCCACCCAAAGCGGCGACGCCCCTCTCTCTCTCTCTCTCTCTCTCTTCTC
TTCTCTTCTCTCCTCCACGTCGCGGCTCGCGCCTCCAAATCCCCCCCCGCGAGGCGAGCA
GGGCGAGGCGGCGAAAGCGCGACGCGCGAGCGGATCGAGGCGGCGGCGTCGGTGCCGGCA
TCCACCGCGTGCATAGGTTGCGTCGGCGGCGGCGGAAGCGGGGCGCGATGACGGACGGCC
ACCACTTCAACAACATATCCCTCGGCGGCCGCGGCGGCAACAACCCTGGCCAGTTTAAAC
TTTATTCGGGAGGACTTGCATGGAAGAGGCAAGGTGGAGGAAAGACCATTGAGGTTGAAA
AGTCTGATATCACTTCTGTGACATGGATGGCAATCCCCAGATCCTATCAGCTTGGTGTTT
CAACAAAGGAGGGCCTCTTCTACAGGTTCTTTGGCTTCCGTGAACAGGATATCAGTTCAT
TGACTAACTTCATGGAAAAGAACATGAGAATCACACCAGAGGAGAAGCAGCTTTCTGTTG
GTGGACATAATTGGGGCGGAATTGAAATCAATGGCAATATGCTTAGCTTTAATGTTGGTT
CAAAGGAAGCATTTGAAGTCTCTCTAGCAGACGTAGCACAAACTCAGATGCAAGGAAAAA
AAGATGTTGTTCTGGAGTTTCATGTGGATGATACTACTGGTGGTAATGAGAAAGATTCAT
TGATGGATTTAAGCTTTCATGTACCAACTTCAAATACTCAATTCCCTGGAGATGAGAATC
GTCCTTCAGCTCAGGTTTTATGGCAGGCTATCTTGAATAAGGCTGATGTTGGCTCATCAG
AGGAAGCTGTTGTTACATTTGATGGAATTGCTATTCTTACTCCAAGAGGTCGATACAGTG
TTGAACTTCATCTGTCATTCTTACGACTCCAAGGACAAGCTAATGATTTCAAAATTCAAT
ATAGCAGTATTCTTCGCCTCTTTGTTTTACCAAAGTCAAATAATCCTCATACCTTTGTGG
TTATCACTCTTGATCCACCAATTCGCAAAGGACAGACATTATATCCTCACATTGTTATTC
AGTTTGAAACTGAAGCAGTCGTTCAAAGGGATCTGACATTAAGTGATGAGGTTTTGGCTG
AAAAGTACAAGGATAGACTGGAGAACTCTTACCAGGGTCTGATACATGAAGTGTTCTCCA
AGGTCCTTCGTGGCCTATCTGGTGCTAAAGTTACGAGGCCAAGCACGTTCCGCAGTTGTC
AAGATGGATATGCAGTGAAATCATCACTCAAAGCTGAAGATGGATTGCTCTATCCGCTGG
AGAAGGGCTTCTTCTTTCTACCAAAGCCCCCAACACTCATTCTGCATGAGGAGATTGAGT
ATGTTGAATTTGAGCGACATGGTGCTGGGGGTGCTAGTATCTCATCTCACTATTTTGATC
TCCTGGTCAAGCTGAAAAATGATCAAGAACATCTATTCAGAAATATCCAAAGAAATGAAT
ACCATAATCTCTTCAATTTCATCAGTGGCAAGCATTTGAAAATCTTGAATCTTGGAGAAG
CTCAAGGTAGAGCTGGTGGCGTTACAGCTGTTCTTCAGAGCACTGATGATGATGCTGTTG
ATCCTCATCTGGAGCGGATCAGAAATCAGACTGGCGATGATGAGAGTGATGAAGAGGATG
AAGATTTTGTGGCGGACAAGGACGACAGTGGATCTCCTACTGATGATTCTGGAGAGGAGG
GTTCTGACGCTAGTTTAAGTGGAGGAGAAAAGGAGAAATCTTCCAAAAAGGAAGCTAGTA
GCTCAAAGGCGCCTTTGAAGAAGAGGAAGCCAAAGGGTGGGGATGCGGCGGAAGGCTCGG
AGAAAAGAAAGCCAAAGAAAAAGAAGGATCCTAATGCCCCTAAAAGAGCAATTGCACCAT
TCATGTACTTCTCAAAAGCTGAGCGAGCTAATCTGAAGAACAGCAATCCGGAGCTGGCTA
CCACAGAGATTGCGAAGAAGCTTGGGGAGAGGTGGCAAAAGATGACAGCCGAGGAGAAGC
AGCCATACGTCGAGCAGTCTCAAGTTGACAAGAAGCGCTACGCGGAGGAGTCAGCCGCCT
ACCGCGGGGCGGCTGCCATGGATGTGGACTCCGGCCCTGCTTCGGACTGAAGAGAAGAGA
CCTGAATTGCATTCCAGATTACCCTTAGTCTAGGAGGGCGACAGACAGGATACGGCTAGT
GGCATCTCTATTTCCATGTAAATAAAACTTATGAGTTATCTGGATGTAAATAAAACTATC
GTAGGTATCTTTCGAGTCCCGTTCTATGAGTGTCTTATCGCTTTATCTTAGCTATATATA
TAGATAGCAGCTATAGTATAGTAGAGTTCTTCCCGCCATTTATGCTGGCCGGATAACTTA
CCTTCACCTATGTAGCAGCAATAAGCATGCTTATCTGCTTAGTTAAATTATAAATGCGTG
TTCTAGCTGGAG
clustalw multiple alignements is not computed in this case