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Oryza sativa
cluster # 5721 cluster # 5721       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5721#0 length = 2157 sequences # 3  

consensusID : consensus_5721#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2157
fasta sequence
                              [GCCGCAGCAGCAGCAGCAGCTATCACCCCCTCACCAACTCCAATTAAGATAGCTCCCGGCCACCCCAACCCAAGCCCTTCTCTTCTCTCTCCCTCTTCTGGTTTGGTTTGTTGCTGGCCCTAGCATCAGCGAGAGAGGCCAGAGGCAGACAGGCAGCTGCTGCTAGATATAGCTAGCCGGCAACGCACTCCACATCCAGCCGCCCTCCTGCTCGATCCATCCATCCATCCACCCGAACCCTAGATAGATGAAAAAGGGCAAAACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTGCTGATATAAGAGATCCATCGAGTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGAGAGGATGATGGTGGTGTCCTTGCCGCGTCCTCTCTTCCATTCCTAGTCCTTTCCGTGTGTGTGCGACTGCGTGAGTAGTGAGGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGGATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCACCACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAAGCAACCCCTACAGCCACTTCACNGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGCCGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAATATTTATCAATCATCTCGATCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTCTTTTCATCTTGTCTCTATTAATTACTGTAATTTGGATATAATAATGATAGCTTATGCGTTATTGTCATGTGTACTGGCAGTTTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATCAAATTTAGTGTAATTTATAGTTTGGTGCCACAAGAGGCTAGTTGGTCAATTAATTTCATCTAGGAAGAATGCACCACATGAAAGTTGTACGAATTTCTACATAACTACCTGAATTTTTCGTGCAATTGCACATGGCTAGATATTGTAGTTCTTTGGGTATATATATATAGTTTTAAT]

[+] EMBL CB653625             [GCCGCAGCAGCAGCAGCAGCTATCACCCCCTCACCAACTCCAATTAAGATAGCTCCCGGCCACCCCAACCCAAGCCCTTCTCTTCTCTCTCCCTCTTCTGGTTTGGTTTGTTGCTGGCCCTAGCATCAGCGAGAGAGGCCAGAGGCAGACAGGCAGCTGCTGCTAGATATAGCTAGCCGGCAACGCACTCCACATCCAGCCGCCCTCCTGCTCGATCCATCCATCCATCCACCCGAACCCTAGATAGATGAAAAAGGGCAAAACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTGCTGATATAAGAGATCCATCGAGTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGAGAGGATGATGGTGGTGTCCTTGCCGCGTCCTCTCTTCCATTCCTAGTCCTTTCCGTGTGTGTGCGACTGCGTGAGTAGTGAGGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGGATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCACCACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAAGCAACCCCTACAGCCACTTCACNG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK068104             [                                                                                                                                                                                                                 GCTCGATCCATCCATCCATCCACCCGAACCCTAGATAGATGAAAAAGGGCAAAACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTGCTGATATAAGAGATCCATCGAGTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGAGAGGATGATGGTGGTGTCCTTGCCGCGTCCTCTCTTCCATTCCTAGTCCTTTCCGTGTGTGTGCGACTGCGTGAGTAGTGAGGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGGATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCACCACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGCCGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAATATTTATCAATCATCTCGATCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTCTTTTCATCTTGTCTCTATTAATTACTGTAATTTGGATATAATAATGATAGCTTATGCGTTATTGTCATGTGTACTGGCAGTTTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATCA                                                                                                                                                                                ]
[-] EMBL CB653626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAATATTTATCAATCATCTCGATCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTCTTTTCATCTTGTCTCTATTAATTACTGTAATTTGGATATAATAATGATAGCTTATGCGTTATTGTCATGTGTACTGGCAGTTTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATCAAATTTAGTGTAATTTATAGTTTGGTGCCACAAGAGGCTAGTTGGTCAATTAATTTCATCTAGGAAGAATGCACCACATGAAAGTTGTACGAATTTCTACATAACTACCTGAATTTTTCGTGCAATTGCACATGGCTAGATATTGTAGTTCTTTGGGTATATATATATAGTTTTAAT]


>consensus_5721#0 GCCGCAGCAGCAGCAGCAGCTATCACCCCCTCACCAACTCCAATTAAGATAGCTCCCGGC CACCCCAACCCAAGCCCTTCTCTTCTCTCTCCCTCTTCTGGTTTGGTTTGTTGCTGGCCC TAGCATCAGCGAGAGAGGCCAGAGGCAGACAGGCAGCTGCTGCTAGATATAGCTAGCCGG CAACGCACTCCACATCCAGCCGCCCTCCTGCTCGATCCATCCATCCATCCACCCGAACCC TAGATAGATGAAAAAGGGCAAAACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTG CTGATATAAGAGATCCATCGAGTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGA GAGGATGATGGTGGTGTCCTTGCCGCGTCCTCTCTTCCATTCCTAGTCCTTTCCGTGTGT GTGCGACTGCGTGAGTAGTGAGGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGG ATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCC ACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGC ATCCAGAGGGATCACCACCACCACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCG AGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACC ATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCC GCTGCCGGCGGCGCCGGTGGCGGAAGCAACCCCTACAGCCACTTCACNGCGGCGGCGGCG GCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGCCGCGCCGGAGTACTAC TTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTC GGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCAC CACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTAC CACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGC GGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGAC GATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCG AAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCA GCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAG ACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGA GAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAG CAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCG TCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCA AATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGC AACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAA TATTTATCAATCATCTCGATCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTC TTTTCATCTTGTCTCTATTAATTACTGTAATTTGGATATAATAATGATAGCTTATGCGTT ATTGTCATGTGTACTGGCAGTTTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATC AAATTTAGTGTAATTTATAGTTTGGTGCCACAAGAGGCTAGTTGGTCAATTAATTTCATC TAGGAAGAATGCACCACATGAAAGTTGTACGAATTTCTACATAACTACCTGAATTTTTCG TGCAATTGCACATGGCTAGATATTGTAGTTCTTTGGGTATATATATATAGTTTTAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)