These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5725#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2029 fasta sequence [AAGCGGCGCCGCGAGCCTCAGTGTCAGGAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCCGCTGCCGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGG-CCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAG-AAGCTAGGCGTCACG-CGCCGCGAGG-CCGTCGCCGTCCACTGGC-TGCGCC-ACTCCCTCTACGATGTC-ACCGGC-TCCGACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGCAGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATTCGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCGTGGAGCAACAACTCTTGTCACGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCACGCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAGAAGCTTGCGCAGTCGGGCTTCCGTGTGTCGTCGCTTGCTGG-AAGTGCCGCTGCTCAGGCCGTGCTGCTGCTTGGGATGTTCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTTTATTTTGCAATTTTGTAGTGCTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAGGATCCTTACTGACATTAGAGATGCAGTTCTTATCGTATGATCATTGATCACAAAATGAAATATCTGGTGGTTAGTGAGCTCAATTAGATTGTTGATAGTGTAGCATTGTCAATGATCACCAAATAATATTGTTAGTGTCCATCTACTATGAGAATTTACATGTACATTTAAGTTAATGTTCCTAATTTTCTCCAGAAAATGACTTAGGGTTGATCTGAATGCCAAATTATCAGCAATGAACTAATGATGGGTAGCACATGAGTTGTGTACTAGAAAGTCAGGATGTTAGTGGTTTTAATTCATGCCATCTAAATCCTGCTAATTCTTTTCTTCTGAAATATTTGAAACCACTGACCTACACTGCTCATTTAGACATTGGTGTATCACTTTTCTAACATTTTTGCATTACAATAATCTTATTATGTAATTCACTTATTCCTGTATCCGGCATCTACTGGATATACATGGT] [+] EMBL AK073467 [AAGCGGCGCCGCGAGCCTCAGTGTCAGGAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCCGCTGCCGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGG CCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAG AAGCTAGGCGTCACG CGCCGCGAGG CCGTCGCCGTCCACTGGC TGCGCC ACTCCCTCTACGATGTC ACCGGC TCCGACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGCAGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATTCGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCGTGGAGCAACAACTCTTGTCACGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCACGCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAGAAGCTTGCGCAGTCGGGCTTCCGTGTGTCGTCGCTTGCTGG AAGTGCCGCTGCTCAGGCCGTGCTGCTGCTTGGGATGTTCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTTTATTTTGCAATTTTGTAGTGCTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAGGATCCTTACTGACATTAGAGATGCAGTTCTTATCGTATGATCATTGATCACAAAATGAAATATCTGGTGGTTAGTGAGCTCAATTAGATTGTTGATAGTGTAGCATTGTCAATGATCACCAAATAATATTGTTAGTGTCCATCTACTATGAGAATTTACATGTACATTTAAGTTAATGTTCCTAATTTTCTCCAGAAAATGACTTAGGGTTGATCTGAATGCCAAATTATCAGCAATGAACTAATGATGGGTAGCACATGAGTTGTGTACTAGAAAGTCAGGATGTTAGTGGTTTTAATTCATGCCATCTAAATCCTGCTAATTCTTTTCTTCTGAAATATTTGAAACCACTGACCTACACTGCTCATTTAGACATTGGTGTATCACTTTTCTAACATTTTTGCATTACAATAATCTTATTATGTAATTCACTTATTCCTGTATCCGGCATCTACTGGATATACATGGT] [-] EMBL AU093320 [ AAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGGCCCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAGAAAGCTAGGCGTNACGCCGCCGCGAGGCCCGTCGGCGTCCACTGGCTTGCGCCAATTCCTTTTACGATGTCAACCGGCTTCCGACT ] [-] EMBL C28500 [ CCGTGTGCCGTCGCTTGCTGGAAAGTGCCGCTGCTNAGGCCGTGCTGCTGCTTGGGATGTCCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTNACTGCCTCTGCTTGGCGCCCAANTCAGGCTTCGGGACGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||