cluster # 5740

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Oryza sativa
cluster # 5740 cluster # 5740 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5740#0 length = 648 sequences # 3

consensusID : consensus_5740#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 648
fasta sequence

                              [ATCCGCGGGCCGAGCTGCCACCGCGGCGTGGGCGCGGCCGGGTCGAACACGAGCGGGCGGGAGAGCGCAGGGTGCAGGGACTGCGTGGAGCCCGAGACGAGGACGAGGCGGCCGGCGGCGGCGACGGACTGCAGCGGGAGGCGGCGANCGAGGAAGGAGGGGTGCCAGANCATGGGCGGCGGCGACGGCATTGGCGGCGAGGGAAGCGCGT-CCCAGCGT-CCAGCCAAGGGGTCGTAGGCGGCAAACGAGACGCCGGCGTCGGCATCCGCGTCGTCGANGAGCGCGTACAGAGACAAAAACGGCGGGGAACGACGGCGCGTACATGAGCCGTCTCCACNGCCGGCAAACGGCGTGCANGAGTCGC-GGCGGGAGCGGCGAGAGGCAG-ACTGCGCCAGGTGGTCCGGCAACCCGGGGAGCAGCGGCTGCGGCGGCGTGGTGGTCGTCATCGTC-GTCGGCGGCGGCGGCGCCACCGCCTCCTCTTCCATGCCGCCGTCCATGGCAGCAGCAGCTGGTAGCGAAGGGCGGAGCCGCTTGTGATTCTGGCCGGAGGAGGAAGTGATCGCCGTCGTGGTCGTCGTCGGCGGCGGCGGCTTGCAGTAGGGGCGCTTAGCCGCGGCCATCATGGTCGCAATACTACTATATNAGAGG]

[+] EMBL AU070674             [ATCCGCGGGCCGAGCTGCCACCGCGGCGTGGGCGCGGCCGGGTCGAACACGAGCGGGCGGGAGAGCGCAGGGTGCAGGGACTGCGTGGAGCCCGAGACGAGGACGAGGCGGCCGGCGGCGGCGACGGACTGCAGCGGGAGGCGGCGANCGAGGAAGGAGGGGTGCCAGANCATGGGCGGCGGCGACGGCATTGGCGGCGAGGGAAGCGCGT CCCAGCGT CCAGCCAAGGGGTCGTAGGCGGCAAACGAGACGCCGGCGTCGGCATCCGCGTCGTCGANGAGCGCGTACAGAGACAAAAACGGCGGGGAACGACGGCGCGTACATGAGCCGTCTCCACNGCCGGCAAACGGCGTGCANGAGTCGCGGGCGGGANCGGCGATAGGCAGAACTGCGCCAGNTGGT                                                                                                                                                                                                                                                         ]
[+] EMBL AU197415             [                                                                                 TGCGTGNAGCCCGAGACGAGGACGANGCGGCCGGCGGCGGCGACGGACTGCAGCGGGAGGCGGCGAGCGAGGAAGGAGGNGTGCCAGAGCATGGGCGGCGGCGACGGCATTGGCGGCGAGGGAAGCGCGTCCCCAGCGTCCCAGCCAAGGGGTCGTAGGCGGCAAACGAGACGCCGGCGTCGGCATCCGCGTCGTCGAGGAGCGCGTACAGAGACAAAAACGGC GGGAACGACGGCGCGTACATGAGCCGTCTCCACGGCCGGCAAACGGCGTGCAGGAGTCGC GGCGGGAGCGGCGAGAGGCAG ANTGCGCCAGGTGGTCCGGCAACCCGGGGAGCAGCGGCTGCGGCGGCGTGGTGGTCGTCATCGTC GTCGGCGGCGGCGGCGCCACCGCCTCCTCTTCCATGCCGCCGTCCATGGCAGCAGCAGCTGGTAGCGAAGGGCGGAGCCGCTTGTGATTCTGGCCGGAGGAGGAAGTGATCGCCGTCGTGGTCGTCGTCGGCGGCGGCGGCTTGCAGTAGGGGCGCTTAGCCGCGGCCATCATGGTC                     ]
[-] EMBL OSC4641              [                                                                                                                                                                                                                                                                                                                                                                          TCGC GGCGGGAGCGGCCAGAGGNAG ACT CGCCAGGTGGTCCGGCAACCCGGGGAGCAGCGGCTGCGGCGGCGTGGTGGTCGTCATCGTCGGTC GCGGC GCGGCGCCACCGCCTCCTCTTCCATGCCGCCGTCCATGGCAGCAGCAGCTGGTAGCGAAGGGCGGAGCCGCTTGTGATTCTGGCCGGAGGAGGAAGTGATCGCCGTCGTGGTCGTCGTCGNCGGCGNCGGCTTGCAGTAGGGGCGCTTAGCCGCGGCCATCATGGTNGCAATACTACTATATNAGAGG]




>consensus_5740#0
ATCCGCGGGCCGAGCTGCCACCGCGGCGTGGGCGCGGCCGGGTCGAACACGAGCGGGCGG
GAGAGCGCAGGGTGCAGGGACTGCGTGGAGCCCGAGACGAGGACGAGGCGGCCGGCGGCG
GCGACGGACTGCAGCGGGAGGCGGCGANCGAGGAAGGAGGGGTGCCAGANCATGGGCGGC
GGCGACGGCATTGGCGGCGAGGGAAGCGCGTCCCAGCGTCCAGCCAAGGGGTCGTAGGCG
GCAAACGAGACGCCGGCGTCGGCATCCGCGTCGTCGANGAGCGCGTACAGAGACAAAAAC
GGCGGGGAACGACGGCGCGTACATGAGCCGTCTCCACNGCCGGCAAACGGCGTGCANGAG
TCGCGGCGGGAGCGGCGAGAGGCAGACTGCGCCAGGTGGTCCGGCAACCCGGGGAGCAGC
GGCTGCGGCGGCGTGGTGGTCGTCATCGTCGTCGGCGGCGGCGGCGCCACCGCCTCCTCT
TCCATGCCGCCGTCCATGGCAGCAGCAGCTGGTAGCGAAGGGCGGAGCCGCTTGTGATTC
TGGCCGGAGGAGGAAGTGATCGCCGTCGTGGTCGTCGTCGGCGGCGGCGGCTTGCAGTAG
GGGCGCTTAGCCGCGGCCATCATGGTCGCAATACTACTATATNAGAGG

clustalw multiple alignements is not computed in this case