cluster # 5777

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Oryza sativa
cluster # 5777 cluster # 5777 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5777#0 length = 436 sequences # 3

consensusID : consensus_5777#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 436
fasta sequence

                              [TNAGTAGCCCAT-CATTCATTCACATCACTATAACTGACAAAATGGCAAGGCCTGGTAGTGGTAACATCCCAGGATCAGCATGCATTCCTCTTCTGATTCTGCTGCTGCTGCTGCTGCTACTGCATCCATCAGAAGCTCAGCCTTCTCCTGGCTACTACCCAAGCAAGATGTTCAGGTCGATGGCCTTCTATGAAGGGTACAGCACCCTGTGGGGCCCACAGCACCAGACCCTGTCCCAGGATCAGAAGTCTCTCACCCTGTGGATGGACCGTAGCTCAGGGAGCGG-GTTCAAGTCGACACGGTCGTACCGGAACGGC-TACTTCGGGGGCGTCGATCA-GGGTGCAG-CGGGCTACACCGCCGGCG-TCAACAC-GGCCTTTTACCT-NTGG-ACACGGAGCAAGTAACCCGGGGGNACACGACGAGATCGACATNGGAGGTT]

[+] EMBL OS1321834            [TNAGTAGCCCATNCATTCATTCACATCACTATAACTGACAAAATGGCAAGGCCTGGTAGTGGTAACATCCCAGGATCAGCATGCATTCCTCTTCTGATTCTGCTGCTGCTGCTGCTGCTACTGCATCCATCAGAAGCTCAGCCTTCTCCTGGCTACTACCCAAGCAAGATGTTCAGGTCGATGGCCTTCTATGAAGGGTACAGCACCCTGTGGGGCCCACAGCACCAGACCCTGTCCCAGGATCAGAAGTCTCTCACCCTGTGGATGGACCGTAGCTCAGGGAGCGG GTTCAAGTCGACACGGTCGTACCGGAACGGC TACTTCGGGGGCGTCGATCA GGGTGCAG CGGGCTACACCGCCGGCG TCAACAC GGCCTTTTACCT NTGG ACACGGAGCA                                        ]
[+] EMBL OSC9841              [  AGTAGCCCAT CATTCATTCACATCACTATAACTGACAAAATGGCAAGG CTGGTAGTGGTAACATCCCAGGATCAGCATGCATTCCTCTTCTGATTCTGCTGCTGCTGCTGCTGCTACTGCATCCATCAGAAGCTCAGCCTTCTCCTGGCTACTACCCAAGCAAGATGTTCAGGTCGATGGCCTTCTATGAAGGGTACAGCACCCTGTGGGGCCCACAGCACCAGACCCTGTCCCAGGATCAGAAGTCTCTCACCCTGTGGATGGACCGTAGCTCAGGGAGCGGNGTTCAAGTCGACACGGTCGTACCGGAACGGC TACTTCGGGGGCGTCGATCAGGGGTGCAGCCGGGCTACAACGCCGGCGTTCAACACGGGCCTTCTANCTGTTGGAACACGGAGGCAGTAACCCGGGGGNACACGACGAGATCGACATNGGAGGTT]
[+] EMBL OS1321916            [     AGCCCAT CATTCATTCACATCACTATAACTGACAAAATGGCAAGGCCTGGTAGTGGTAACATCCCAGGNTCAGCATGCATTCCTCTTCTNATTCTNCTGCTGCTGCTGCTGCTACTGCATCCATCAGAAGCTCAGCCTTCTCCTGGCTACTACCCAAGCAAGATGTTCAGGTCGATGGCCTTNTATGAAGGGTACAGCACCCTGTGGGGCCCACAGCACCAGACCCTGTCCCAGGNTCAGAAGTCTCTCACCCTGTGGNTGGACCGTAGCTCAGGGAGCGG GTTCAAGTNGACACGGTCGTACCGGAACGNCTTACTTC GGGGCGTn                                                                                                              ]




>consensus_5777#0
TNAGTAGCCCATCATTCATTCACATCACTATAACTGACAAAATGGCAAGGCCTGGTAGTG
GTAACATCCCAGGATCAGCATGCATTCCTCTTCTGATTCTGCTGCTGCTGCTGCTGCTAC
TGCATCCATCAGAAGCTCAGCCTTCTCCTGGCTACTACCCAAGCAAGATGTTCAGGTCGA
TGGCCTTCTATGAAGGGTACAGCACCCTGTGGGGCCCACAGCACCAGACCCTGTCCCAGG
ATCAGAAGTCTCTCACCCTGTGGATGGACCGTAGCTCAGGGAGCGGGTTCAAGTCGACAC
GGTCGTACCGGAACGGCTACTTCGGGGGCGTCGATCAGGGTGCAGCGGGCTACACCGCCG
GCGTCAACACGGCCTTTTACCTNTGGACACGGAGCAAGTAACCCGGGGGNACACGACGAG
ATCGACATNGGAGGTT

clustalw multiple alignements is not computed in this case